Literature DB >> 21326833

Rapid generation of random mutant libraries.

Mary Abou-Nader1, Michael J Benedik.   

Abstract

A simple and efficient method utilizing in vivo recombination to create recombinant libraries incorporating the products of PCR amplification is described. This will be especially useful for generating large pools of randomly mutagenized clones after error-prone PCR mutagenesis. Here we investigate various parameters to optimize this approach and we demonstrate that as little as 1 pmole of PCR fragment can generate a library with greater than 104 clones in a single transformation without ligation.
© 2010 Landes Bioscience

Keywords:  directed evolution; error prone PCR; in vivo cloning; lambda red proteins; mutant libraries

Mesh:

Year:  2010        PMID: 21326833      PMCID: PMC3037583          DOI: 10.4161/bbug.1.5.12942

Source DB:  PubMed          Journal:  Bioeng Bugs        ISSN: 1949-1018


  22 in total

Review 1.  Molecular interactions of the CcdB poison with its bacterial target, the DNA gyrase.

Authors:  Laurence Van Melderen
Journal:  Int J Med Microbiol       Date:  2002-02       Impact factor: 3.473

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Authors:  J M Clark
Journal:  Nucleic Acids Res       Date:  1988-10-25       Impact factor: 16.971

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Authors:  S J Scharf; G T Horn; H A Erlich
Journal:  Science       Date:  1986-09-05       Impact factor: 47.728

5.  Interaction of the recombination pathways of bacteriophage lambda and its host Escherichia coli K12: effects on exonuclease V activity.

Authors:  R C Unger; A J Clark
Journal:  J Mol Biol       Date:  1972-10-14       Impact factor: 5.469

Review 6.  Mechanism and control of homologous recombination in Escherichia coli.

Authors:  G R Smith
Journal:  Annu Rev Genet       Date:  1987       Impact factor: 16.830

7.  Mini-F plasmid genes that couple host cell division to plasmid proliferation.

Authors:  T Ogura; S Hiraga
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

8.  Molecular mechanisms of manganese mutagenesis.

Authors:  W S El-Deiry; K M Downey; A G So
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

9.  On the fidelity of DNA replication: manganese mutagenesis in vitro.

Authors:  R A Beckman; A S Mildvan; L A Loeb
Journal:  Biochemistry       Date:  1985-10-08       Impact factor: 3.162

10.  CynD, the cyanide dihydratase from Bacillus pumilus: gene cloning and structural studies.

Authors:  Dakshina Jandhyala; Mark Berman; Paul R Meyers; B Trevor Sewell; Richard C Willson; Michael J Benedik
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

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  3 in total

1.  Structure and function characterization of the phytoene desaturase related to the lutein biosynthesis in Chlorella protothecoides CS-41.

Authors:  Meiya Li; Zhibing Gan; Yan Cui; Chunlei Shi; Xianming Shi
Journal:  Mol Biol Rep       Date:  2012-12-28       Impact factor: 2.316

2.  OverFlap PCR: A reliable approach for generating plasmid DNA libraries containing random sequences without a template bias.

Authors:  Artis Linars; Ivars Silamikelis; Dita Gudra; Ance Roga; Davids Fridmanis
Journal:  PLoS One       Date:  2022-08-08       Impact factor: 3.752

3.  Bacillus pumilus Cyanide Dihydratase Mutants with Higher Catalytic Activity.

Authors:  Mary A Crum; B Trevor Sewell; Michael J Benedik
Journal:  Front Microbiol       Date:  2016-08-12       Impact factor: 5.640

  3 in total

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