Literature DB >> 21317293

Characterization of the interactions between the nucleoprotein and the phosphoprotein of Henipavirus.

Johnny Habchi1, Stéphanie Blangy, Laurent Mamelli, Malene Ringkjøbing Jensen, Martin Blackledge, Hervé Darbon, Michael Oglesbee, Yaoling Shu, Sonia Longhi.   

Abstract

The Henipavirus genome is encapsidated by the nucleoprotein (N) within a helical nucleocapsid that recruits the polymerase complex via the phosphoprotein (P). In a previous study, we reported that in henipaviruses, the N-terminal domain of the phosphoprotein and the C-terminal domain of the nucleoprotein (N(TAIL)) are both intrinsically disordered. Here we show that Henipavirus N(TAIL) domains are also disordered in the context of full-length nucleoproteins. We also report the cloning, purification, and characterization of the C-terminal X domains (P(XD)) of Henipavirus phosphoproteins. Using isothermal titration calorimetry, we show that N(TAIL) and P(XD) form a 1:1 stoichiometric complex that is stable under NaCl concentrations as high as 1 M and has a K(D) in the μM range. Using far-UV circular dichroism and nuclear magnetic resonance, we show that P(XD) triggers an increase in the α-helical content of N(TAIL). Using fluorescence spectroscopy, we show that P(XD) has no impact on the chemical environment of a Trp residue introduced at position 527 of the Henipavirus N(TAIL) domain, thus arguing for the lack of stable contacts between the C termini of N(TAIL) and P(XD). Finally, we present a tentative structural model of the N(TAIL)-P(XD) interaction in which a short, order-prone region of N(TAIL) (α-MoRE; amino acids 473-493) adopts an α-helical conformation and is embedded between helices α2 and α3 of P(XD), leading to a relatively small interface dominated by hydrophobic contacts. The present results provide the first detailed experimental characterization of the N-P interaction in henipaviruses and designate the N(TAIL)-P(XD) interaction as a valuable target for rational antiviral approaches.

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Year:  2011        PMID: 21317293      PMCID: PMC3075704          DOI: 10.1074/jbc.M111.219857

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  127 in total

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2.  Analysis of molecular recognition features (MoRFs).

Authors:  Amrita Mohan; Christopher J Oldfield; Predrag Radivojac; Vladimir Vacic; Marc S Cortese; A Keith Dunker; Vladimir N Uversky
Journal:  J Mol Biol       Date:  2006-08-04       Impact factor: 5.469

3.  Characterization of molecular recognition features, MoRFs, and their binding partners.

Authors:  Vladimir Vacic; Christopher J Oldfield; Amrita Mohan; Predrag Radivojac; Marc S Cortese; Vladimir N Uversky; A Keith Dunker
Journal:  J Proteome Res       Date:  2007-05-09       Impact factor: 4.466

4.  The proteomics of N-terminal methionine cleavage.

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Journal:  Mol Cell Proteomics       Date:  2006-09-08       Impact factor: 5.911

5.  Assessing induced folding of an intrinsically disordered protein by site-directed spin-labeling electron paramagnetic resonance spectroscopy.

Authors:  Benjamin Morin; Jean-Marie Bourhis; Valérie Belle; Mireille Woudstra; Frédéric Carrière; Bruno Guigliarelli; André Fournel; Sonia Longhi
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Review 6.  Intrinsic disorder and functional proteomics.

Authors:  Predrag Radivojac; Lilia M Iakoucheva; Christopher J Oldfield; Zoran Obradovic; Vladimir N Uversky; A Keith Dunker
Journal:  Biophys J       Date:  2006-12-08       Impact factor: 4.033

7.  Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5.

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Journal:  J Biol Chem       Date:  2007-02-07       Impact factor: 5.157

8.  Interaction of the C-terminal domains of sendai virus N and P proteins: comparison of polymerase-nucleocapsid interactions within the paramyxovirus family.

Authors:  Klaartje Houben; Dominique Marion; Nicolas Tarbouriech; Rob W H Ruigrok; Laurence Blanchard
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Review 9.  Application of the use of high-throughput technologies to the determination of protein structures of bacterial and viral pathogens.

Authors:  M J Fogg; P Alzari; M Bahar; I Bertini; J M Betton; W P Burmeister; C Cambillau; B Canard; M A Corrondo; M Carrondo; M Coll; S Daenke; O Dym; M P Egloff; F J Enguita; A Geerlof; A Haouz; T A Jones; Qingjun Ma; S N Manicka; M Migliardi; P Nordlund; R J Owens; Y Peleg; G Schneider; R Schnell; D I Stuart; N Tarbouriech; T Unge; A J Wilkinson; M Wilmanns; K S Wilson; O Zimhony; J M Grimes
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-09-19

Review 10.  SPINE bioinformatics and data-management aspects of high-throughput structural biology.

Authors:  S Albeck; P Alzari; C Andreini; L Banci; I M Berry; I Bertini; C Cambillau; B Canard; L Carter; S X Cohen; J M Diprose; O Dym; R M Esnouf; C Felder; F Ferron; F Guillemot; R Hamer; M Ben Jelloul; R A Laskowski; T Laurent; S Longhi; R Lopez; C Luchinat; H Malet; T Mochel; R J Morris; L Moulinier; T Oinn; A Pajon; Y Peleg; A Perrakis; O Poch; J Prilusky; A Rachedi; R Ripp; A Rosato; I Silman; D I Stuart; J L Sussman; J C Thierry; J D Thompson; J M Thornton; T Unger; B Vaughan; W Vranken; J D Watson; G Whamond; K Henrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-09-19
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  29 in total

1.  Protein domain definition should allow for conditional disorder.

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2.  How disordered is my protein and what is its disorder for? A guide through the "dark side" of the protein universe.

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Review 3.  How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication.

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Review 4.  Conditionally disordered proteins: bringing the environment back into the fold.

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5.  The Unstructured Paramyxovirus Nucleocapsid Protein Tail Domain Modulates Viral Pathogenesis through Regulation of Transcriptase Activity.

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6.  Structural Description of the Nipah Virus Phosphoprotein and Its Interaction with STAT1.

Authors:  Malene Ringkjøbing Jensen; Filip Yabukarski; Guillaume Communie; Eric Condamine; Caroline Mas; Valentina Volchkova; Nicolas Tarbouriech; Jean-Marie Bourhis; Viktor Volchkov; Martin Blackledge; Marc Jamin
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7.  Interfacial Properties of NTAIL, an Intrinsically Disordered Protein.

Authors:  Anaïs Bénarouche; Johnny Habchi; Alain Cagna; Ofelia Maniti; Agnès Girard-Egrot; Jean-François Cavalier; Sonia Longhi; Frédéric Carrière
Journal:  Biophys J       Date:  2017-12-19       Impact factor: 4.033

8.  Predicting Protein Conformational Disorder and Disordered Binding Sites.

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9.  Exploration of nucleoprotein α-MoRE and XD interactions of Nipah and Hendra viruses.

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Journal:  J Mol Model       Date:  2018-04-24       Impact factor: 1.810

10.  Crystal structure of the nipah virus phosphoprotein tetramerization domain.

Authors:  Jessica F Bruhn; Katherine C Barnett; Jaclyn Bibby; Jens M H Thomas; Ronan M Keegan; Daniel J Rigden; Zachary A Bornholdt; Erica Ollmann Saphire
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