Literature DB >> 21293374

Single mimivirus particles intercepted and imaged with an X-ray laser.

M Marvin Seibert1, Tomas Ekeberg, Filipe R N C Maia, Martin Svenda, Jakob Andreasson, Olof Jönsson, Duško Odić, Bianca Iwan, Andrea Rocker, Daniel Westphal, Max Hantke, Daniel P DePonte, Anton Barty, Joachim Schulz, Lars Gumprecht, Nicola Coppola, Andrew Aquila, Mengning Liang, Thomas A White, Andrew Martin, Carl Caleman, Stephan Stern, Chantal Abergel, Virginie Seltzer, Jean-Michel Claverie, Christoph Bostedt, John D Bozek, Sébastien Boutet, A Alan Miahnahri, Marc Messerschmidt, Jacek Krzywinski, Garth Williams, Keith O Hodgson, Michael J Bogan, Christina Y Hampton, Raymond G Sierra, Dmitri Starodub, Inger Andersson, Saša Bajt, Miriam Barthelmess, John C H Spence, Petra Fromme, Uwe Weierstall, Richard Kirian, Mark Hunter, R Bruce Doak, Stefano Marchesini, Stefan P Hau-Riege, Matthias Frank, Robert L Shoeman, Lukas Lomb, Sascha W Epp, Robert Hartmann, Daniel Rolles, Artem Rudenko, Carlo Schmidt, Lutz Foucar, Nils Kimmel, Peter Holl, Benedikt Rudek, Benjamin Erk, André Hömke, Christian Reich, Daniel Pietschner, Georg Weidenspointner, Lothar Strüder, Günter Hauser, Hubert Gorke, Joachim Ullrich, Ilme Schlichting, Sven Herrmann, Gerhard Schaller, Florian Schopper, Heike Soltau, Kai-Uwe Kühnel, Robert Andritschke, Claus-Dieter Schröter, Faton Krasniqi, Mario Bott, Sebastian Schorb, Daniela Rupp, Marcus Adolph, Tais Gorkhover, Helmut Hirsemann, Guillaume Potdevin, Heinz Graafsma, Björn Nilsson, Henry N Chapman, Janos Hajdu.   

Abstract

X-ray lasers offer new capabilities in understanding the structure of biological systems, complex materials and matter under extreme conditions. Very short and extremely bright, coherent X-ray pulses can be used to outrun key damage processes and obtain a single diffraction pattern from a large macromolecule, a virus or a cell before the sample explodes and turns into plasma. The continuous diffraction pattern of non-crystalline objects permits oversampling and direct phase retrieval. Here we show that high-quality diffraction data can be obtained with a single X-ray pulse from a non-crystalline biological sample, a single mimivirus particle, which was injected into the pulsed beam of a hard-X-ray free-electron laser, the Linac Coherent Light Source. Calculations indicate that the energy deposited into the virus by the pulse heated the particle to over 100,000 K after the pulse had left the sample. The reconstructed exit wavefront (image) yielded 32-nm full-period resolution in a single exposure and showed no measurable damage. The reconstruction indicates inhomogeneous arrangement of dense material inside the virion. We expect that significantly higher resolutions will be achieved in such experiments with shorter and brighter photon pulses focused to a smaller area. The resolution in such experiments can be further extended for samples available in multiple identical copies.

Entities:  

Mesh:

Year:  2011        PMID: 21293374      PMCID: PMC4038304          DOI: 10.1038/nature09748

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  23 in total

1.  Potential for biomolecular imaging with femtosecond X-ray pulses.

Authors:  R Neutze; R Wouts; D van der Spoel; E Weckert; J Hajdu
Journal:  Nature       Date:  2000-08-17       Impact factor: 49.962

2.  A giant virus in amoebae.

Authors:  Bernard La Scola; Stéphane Audic; Catherine Robert; Liang Jungang; Xavier de Lamballerie; Michel Drancourt; Richard Birtles; Jean-Michel Claverie; Didier Raoult
Journal:  Science       Date:  2003-03-28       Impact factor: 47.728

3.  Diffraction imaging of single particles and biomolecules.

Authors:  G Huldt; A Szoke; J Hajdu
Journal:  J Struct Biol       Date:  2003 Oct-Nov       Impact factor: 2.867

4.  Mimivirus: the emerging paradox of quasi-autonomous viruses.

Authors:  Jean-Michel Claverie; Chantal Abergel
Journal:  Trends Genet       Date:  2010-08-07       Impact factor: 11.639

5.  The 1.2-megabase genome sequence of Mimivirus.

Authors:  Didier Raoult; Stéphane Audic; Catherine Robert; Chantal Abergel; Patricia Renesto; Hiroyuki Ogata; Bernard La Scola; Marie Suzan; Jean-Michel Claverie
Journal:  Science       Date:  2004-10-14       Impact factor: 47.728

6.  Reconstruction of a yeast cell from X-ray diffraction data.

Authors:  Pierre Thibault; Veit Elser; Chris Jacobsen; David Shapiro; David Sayre
Journal:  Acta Crystallogr A       Date:  2006-06-21       Impact factor: 2.290

7.  Classification and averaging of random orientation single macromolecular diffraction patterns at atomic resolution.

Authors:  G Bortel; G Faigel; M Tegze
Journal:  J Struct Biol       Date:  2009-05       Impact factor: 2.867

8.  Reconstruction algorithm for single-particle diffraction imaging experiments.

Authors:  Ne-Te Duane Loh; Veit Elser
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-08-24

9.  Single polymer dynamics in an elongational flow.

Authors:  T T Perkins; D E Smith; S Chu
Journal:  Science       Date:  1997-06-27       Impact factor: 47.728

10.  Data preparation and evaluation techniques for x-ray diffraction microscopy.

Authors:  Jan Steinbrener; Johanna Nelson; Xiaojing Huang; Stefano Marchesini; David Shapiro; Joshua J Turner; Chris Jacobsen
Journal:  Opt Express       Date:  2010-08-30       Impact factor: 3.894

View more
  151 in total

1.  Laser science: Even harder X-rays.

Authors:  Jon Marangos
Journal:  Nature       Date:  2012-01-25       Impact factor: 49.962

2.  Imaging ultrafast molecular dynamics with laser-induced electron diffraction.

Authors:  Cosmin I Blaga; Junliang Xu; Anthony D DiChiara; Emily Sistrunk; Kaikai Zhang; Pierre Agostini; Terry A Miller; Louis F DiMauro; C D Lin
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

3.  Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight.

Authors:  N D Loh; C Y Hampton; A V Martin; D Starodub; R G Sierra; A Barty; A Aquila; J Schulz; L Lomb; J Steinbrener; R L Shoeman; S Kassemeyer; C Bostedt; J Bozek; S W Epp; B Erk; R Hartmann; D Rolles; A Rudenko; B Rudek; L Foucar; N Kimmel; G Weidenspointner; G Hauser; P Holl; E Pedersoli; M Liang; M S Hunter; M M Hunter; L Gumprecht; N Coppola; C Wunderer; H Graafsma; F R N C Maia; T Ekeberg; M Hantke; H Fleckenstein; H Hirsemann; K Nass; T A White; H J Tobias; G R Farquar; W H Benner; S P Hau-Riege; C Reich; A Hartmann; H Soltau; S Marchesini; S Bajt; M Barthelmess; P Bucksbaum; K O Hodgson; L Strüder; J Ullrich; M Frank; I Schlichting; H N Chapman; M J Bogan
Journal:  Nature       Date:  2012-06-27       Impact factor: 49.962

4.  Imaging electronic quantum motion with light.

Authors:  Gopal Dixit; Oriol Vendrell; Robin Santra
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

5.  Observation of femtosecond X-ray interactions with matter using an X-ray-X-ray pump-probe scheme.

Authors:  Ichiro Inoue; Yuichi Inubushi; Takahiro Sato; Kensuke Tono; Tetsuo Katayama; Takashi Kameshima; Kanade Ogawa; Tadashi Togashi; Shigeki Owada; Yoshiyuki Amemiya; Takashi Tanaka; Toru Hara; Makina Yabashi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-25       Impact factor: 11.205

Review 6.  Frontiers, opportunities, and challenges in biochemical and chemical catalysis of CO2 fixation.

Authors:  Aaron M Appel; John E Bercaw; Andrew B Bocarsly; Holger Dobbek; Daniel L DuBois; Michel Dupuis; James G Ferry; Etsuko Fujita; Russ Hille; Paul J A Kenis; Cheryl A Kerfeld; Robert H Morris; Charles H F Peden; Archie R Portis; Stephen W Ragsdale; Thomas B Rauchfuss; Joost N H Reek; Lance C Seefeldt; Rudolf K Thauer; Grover L Waldrop
Journal:  Chem Rev       Date:  2013-06-14       Impact factor: 60.622

7.  Diffraction before destruction.

Authors:  Allison Doerr
Journal:  Nat Methods       Date:  2011-04       Impact factor: 28.547

8.  The New Macromolecular Femtosecond Crystallography (MFX) Instrument at LCLS.

Authors:  Sébastien Boutet; Aina Cohen; Soichi Wakatsuki
Journal:  Synchrotron Radiat News       Date:  2016-02-01

9.  Imaging transient melting of a nanocrystal using an X-ray laser.

Authors:  Jesse N Clark; Loren Beitra; Gang Xiong; David M Fritz; Henrik T Lemke; Diling Zhu; Matthieu Chollet; Garth J Williams; Marc M Messerschmidt; Brian Abbey; Ross J Harder; Alexander M Korsunsky; Justin S Wark; David A Reis; Ian K Robinson
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-01       Impact factor: 11.205

Review 10.  Synchrotron radiation X-ray diffraction studies on muscle: past, present, and future.

Authors:  Hiroyuki Iwamoto
Journal:  Biophys Rev       Date:  2019-06-15
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.