Literature DB >> 21284379

Investigation of the mechanism of formation of a thiolate-ligated Fe(III)-OOH.

Elaine Nam1, Pauline E Alokolaro, Rodney D Swartz, Morgan C Gleaves, Jessica Pikul, Julie A Kovacs.   

Abstract

Kinetic studies aimed at determining the most probable mechanism for the proton-dependent [Fe(II)(S(Me2)N(4)(tren))](+) (1) promoted reduction of superoxide via a thiolate-ligated hydroperoxo intermediate [Fe(III)(S(Me2)N(4)(tren))(OOH)](+) (2) are described. Rate laws are derived for three proposed mechanisms, and it is shown that they should conceivably be distinguishable by kinetics. For weak proton donors with pK(a(HA)) > pK(a(HO(2))) rates are shown to correlate with proton donor pK(a), and display first-order dependence on iron, and half-order dependence on superoxide and proton donor HA. Proton donors acidic enough to convert O(2)(-) to HO(2) (in tetrahydrofuran, THF), that is, those with pK(a(HA)) < pK(a(HO(2))), are shown to display first-order dependence on both superoxide and iron, and rates which are independent of proton donor concentration. Relative pK(a) values were determined in THF by measuring equilibrium ion pair acidity constants using established methods. Rates of hydroperoxo 2 formation displays no apparent deuterium isotope effect, and bases, such as methoxide, are shown to inhibit the formation of 2. Rate constants for p-substituted phenols are shown to correlate linearly with the Hammett substituent constants σ(-). Activation parameters ((ΔH(++) = 2.8 kcal/mol, ΔS(++) = -31 eu) are shown to be consistent with a low-barrier associative mechanism that does not involve extensive bond cleavage. Together, these data are shown to be most consistent with a mechanism involving the addition of HO(2) to 1 with concomitant oxidation of the metal ion, and reduction of superoxide (an "oxidative addition" of sorts), in the rate-determining step. Activation parameters for MeOH- (ΔH(++) = 13.2 kcal/mol and ΔS(++) = -24.3 eu), and acetic acid- (ΔH(++) = 8.3 kcal/mol and ΔS(++) = -34 eu) promoted release of H(2)O(2) to afford solvent-bound [Fe(III)(S(Me2)N(4)(tren))(OMe)](+) (3) and [Fe(III)(S(Me2)N(4)(tren))(O(H)Me)](+) (4), respectively, are shown to be more consistent with a reaction involving rate-limiting protonation of an Fe(III)-OOH, than with one involving rate-limiting O-O bond cleavage. The observed deuterium isotope effect (k(H)/k(D) = 3.1) is also consistent with this mechanism.
© 2011 American Chemical Society

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Year:  2011        PMID: 21284379      PMCID: PMC3374498          DOI: 10.1021/ic101776m

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  34 in total

1.  Structures of the superoxide reductase from Pyrococcus furiosus in the oxidized and reduced states.

Authors:  A P Yeh; Y Hu; F E Jenney; M W Adams; D C Rees
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

2.  Invited award contribution for ACS Award in Inorganic Chemistry. Geometric and electronic structure contributions to function in bioinorganic chemistry: active sites in non-heme iron enzymes.

Authors:  E I Solomon
Journal:  Inorg Chem       Date:  2001-07-16       Impact factor: 5.165

Review 3.  Kinetics and mechanisms of formation and reactivity of non-heme iron oxygen intermediates.

Authors:  Sergey V Kryatov; Elena V Rybak-Akimova; Siegfried Schindler
Journal:  Chem Rev       Date:  2005-06       Impact factor: 60.622

4.  Mechanisms of electron transfer in catalysis by copper zinc superoxide dismutase.

Authors:  Valeriy V Smirnov; Justine P Roth
Journal:  J Am Chem Soc       Date:  2006-12-27       Impact factor: 15.419

5.  The first crystal structure of class III superoxide reductase from Treponema pallidum.

Authors:  Teresa Santos-Silva; José Trincão; Ana Luísa Carvalho; Cecília Bonifácio; Françoise Auchère; Patrícia Raleiras; Isabel Moura; José J G Moura; Maria João Romão
Journal:  J Biol Inorg Chem       Date:  2006-05-06       Impact factor: 3.358

6.  Kinetics and Equilibria of Dioxygen Binding to a Vacant Site in Cobalt(II) Complexes with Pentadentate Ligands.

Authors:  Elena V. Rybak-Akimova; William Otto; Peter Deardorf; Rebecca Roesner; Daryle H. Busch
Journal:  Inorg Chem       Date:  1997-06-18       Impact factor: 5.165

7.  Synthetic models for the cysteinate-ligated non-heme iron enzyme superoxide reductase: observation and structural characterization by XAS of an Fe(III)-OOH intermediate.

Authors:  Jason Shearer; Robert C Scarrow; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2002-10-02       Impact factor: 15.419

8.  Computational study of the non-heme iron active site in superoxide reductase and its reaction with superoxide.

Authors:  Radu Silaghi-Dumitrescu; Ioan Silaghi-Dumitrescu; Eric D Coulter; Donald M Kurtz
Journal:  Inorg Chem       Date:  2003-01-27       Impact factor: 5.165

9.  Kinetic isotope effects on the rate-limiting step of heme oxygenase catalysis indicate concerted proton transfer/heme hydroxylation.

Authors:  Roman Davydov; Toshitaka Matsui; Hiroshi Fujii; Masao Ikeda-Saito; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2003-12-31       Impact factor: 15.419

10.  Measured rates of fluoride/metal association correlate with rates of superoxide/metal reactions for Fe(III)EDTA(H2O)- and related complexes.

Authors:  Jack S Summers; Joseph B Baker; Dan Meyerstein; Amir Mizrahi; Israel Zilbermann; Haim Cohen; Christopher M Wilson; Jamie R Jones
Journal:  J Am Chem Soc       Date:  2008-01-11       Impact factor: 15.419

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  14 in total

1.  Characterization and dioxygen reactivity of a new series of coordinatively unsaturated thiolate-ligated manganese(II) complexes.

Authors:  Michael K Coggins; Santiago Toledo; Erika Shaffer; Werner Kaminsky; Jason Shearer; Julie A Kovacs
Journal:  Inorg Chem       Date:  2012-05-29       Impact factor: 5.165

Review 2.  Superoxide dismutases and superoxide reductases.

Authors:  Yuewei Sheng; Isabel A Abreu; Diane E Cabelli; Michael J Maroney; Anne-Frances Miller; Miguel Teixeira; Joan Selverstone Valentine
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

Review 3.  Lessons from Nature: A Bio-Inspired Approach to Molecular Design.

Authors:  Sarah A Cook; Ethan A Hill; A S Borovik
Journal:  Biochemistry       Date:  2015-06-30       Impact factor: 3.162

4.  Superoxide Oxidation by a Thiolate-Ligated Iron Complex and Anion Inhibition.

Authors:  Maksym A Dedushko; Jessica H Pikul; Julie A Kovacs
Journal:  Inorg Chem       Date:  2021-04-26       Impact factor: 5.165

5.  Metal-Assisted Oxo Atom Addition to an Fe(III) Thiolate.

Authors:  Gloria Villar-Acevedo; Priscilla Lugo-Mas; Maike N Blakely; Julian A Rees; Abbie S Ganas; Erin M Hanada; Werner Kaminsky; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2016-12-29       Impact factor: 15.419

6.  Structural and spectroscopic characterization of metastable thiolate-ligated manganese(III)-alkylperoxo species.

Authors:  Michael K Coggins; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2011-07-27       Impact factor: 15.419

7.  Characterization of a thiolato iron(III) Peroxy dianion complex.

Authors:  Aidan R McDonald; Katherine M Van Heuvelen; Yisong Guo; Feifei Li; Emile L Bominaar; Eckard Münck; Lawrence Que
Journal:  Angew Chem Int Ed Engl       Date:  2012-08-06       Impact factor: 15.336

8.  Tuning the Relative Stability and Reactivity of Manganese Dioxygen and Peroxo Intermediates via Systematic Ligand Modification.

Authors:  Julie A Kovacs
Journal:  Acc Chem Res       Date:  2015-09-03       Impact factor: 22.384

9.  Stepwise protonation and electron-transfer reduction of a primary copper-dioxygen adduct.

Authors:  Ryan L Peterson; Jake W Ginsbach; Ryan E Cowley; Munzarin F Qayyum; Richard A Himes; Maxime A Siegler; Cathy D Moore; Britt Hedman; Keith O Hodgson; Shunichi Fukuzumi; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2013-11-06       Impact factor: 15.419

10.  Thioether-ligated iron(II) and iron(III)-hydroperoxo/alkylperoxo complexes with an H-bond donor in the second coordination sphere.

Authors:  Leland R Widger; Yunbo Jiang; Alison C McQuilken; Tzuhsiung Yang; Maxime A Siegler; Hirotoshi Matsumura; Pierre Moënne-Loccoz; Devesh Kumar; Sam P de Visser; David P Goldberg
Journal:  Dalton Trans       Date:  2014-05-28       Impact factor: 4.390

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