Literature DB >> 21265008

Quantitative comparison of polar approach versus fitting method in time domain FLIM image analysis.

A Leray1, C Spriet, D Trinel, R Blossey, Y Usson, L Héliot.   

Abstract

We calculate here analytically the performance of the polar approach (or phasor) in terms of signal-to-noise ratio and F values when performing time-domain Fluorescence Lifetime Imaging Microscopy (FLIM) to determine the minimal number of photons necessary for FLIM measurements (which is directly related to the F value), and compare them to those obtained from a well-known fitting strategy using the Least Square Method (LSM). The importance of the fluorescence background on the lifetime measurement precision is also investigated. We demonstrate here that the LSM does not provide the best estimator of the lifetime parameter for fluorophores exhibiting mono-exponential intensity decays as soon as fluorescence background is superior to 5%. The polar approach enables indeed to determine more precisely the lifetime values for a limited range corresponding to usually encountered fluorescence lifetime values. These theoretical results are corroborated with Monte Carlo simulations. We finally demonstrate experimentally that the polar approach allows distinguishing in living cells two fluorophores undetectable with usual time-domain LSM fitting software.
Copyright © 2010 International Society for Advancement of Cytometry.

Mesh:

Year:  2010        PMID: 21265008     DOI: 10.1002/cyto.a.20996

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  13 in total

1.  Extended output phasor representation of multi-spectral fluorescence lifetime imaging microscopy.

Authors:  Daniel U Campos-Delgado; O Gutiérrez Navarro; E R Arce-Santana; Javier A Jo
Journal:  Biomed Opt Express       Date:  2015-05-13       Impact factor: 3.732

Review 2.  Non fitting based FRET-FLIM analysis approaches applied to quantify protein-protein interactions in live cells.

Authors:  Sergi Padilla-Parra; Nicolas Auduge; Maite Coppey-Moisan; Marc Tramier
Journal:  Biophys Rev       Date:  2011-05-17

3.  Processing of fluorescence lifetime image using modified phasor approach: homo-FRET from the acceptor.

Authors:  Yanzhou Zhou; Yulei Bai; Ci Chen; John M Dickenson
Journal:  J Fluoresc       Date:  2013-03-15       Impact factor: 2.217

4.  Complex wavelet filter improves FLIM phasors for photon starved imaging experiments.

Authors:  P Wang; F Hecht; G Ossato; S Tille; S E Fraser; J A Junge
Journal:  Biomed Opt Express       Date:  2021-05-17       Impact factor: 3.732

5.  FRET Image Correlation Spectroscopy Reveals RNAPII-Independent P-TEFb Recruitment on Chromatin.

Authors:  Gabriel Bidaux; Corentin Le Nézet; Mariano Gonzalez Pisfil; Mélanie Henry; Alessandro Furlan; Oliver Bensaude; Bernard Vandenbunder; Laurent Héliot
Journal:  Biophys J       Date:  2018-02-06       Impact factor: 4.033

6.  Autofluorescence lifetime imaging of cellular metabolism: Sensitivity toward cell density, pH, intracellular, and intercellular heterogeneity.

Authors:  Jenu V Chacko; Kevin W Eliceiri
Journal:  Cytometry A       Date:  2018-10-08       Impact factor: 4.355

7.  Quantification of cellular autofluorescence of human skin using multiphoton tomography and fluorescence lifetime imaging in two spectral detection channels.

Authors:  Rakesh Patalay; Clifford Talbot; Yuriy Alexandrov; Ian Munro; Mark A A Neil; Karsten König; Paul M W French; Anthony Chu; Gordon W Stamp; Chris Dunsby
Journal:  Biomed Opt Express       Date:  2011-11-10       Impact factor: 3.732

8.  G-quadruplex structure and stability illuminated by 2-aminopurine phasor plots.

Authors:  Robert Buscaglia; David M Jameson; Jonathan B Chaires
Journal:  Nucleic Acids Res       Date:  2012-01-12       Impact factor: 16.971

9.  Spatio-Temporal Quantification of FRET in living cells by fast time-domain FLIM: a comparative study of non-fitting methods [corrected].

Authors:  Aymeric Leray; Sergi Padilla-Parra; Julien Roul; Laurent Héliot; Marc Tramier
Journal:  PLoS One       Date:  2013-07-18       Impact factor: 3.240

10.  Targeting of short TRPM8 isoforms induces 4TM-TRPM8-dependent apoptosis in prostate cancer cells.

Authors:  Gabriel Bidaux; Anne-Sophie Borowiec; Charlotte Dubois; Philippe Delcourt; Céline Schulz; Fabien Vanden Abeele; Gilbert Lepage; Emilie Desruelles; Alexandre Bokhobza; Etienne Dewailly; Christian Slomianny; Morad Roudbaraki; Laurent Héliot; Jean-Louis Bonnal; Brigitte Mauroy; Pascal Mariot; Loïc Lemonnier; Natalia Prevarskaya
Journal:  Oncotarget       Date:  2016-05-17
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