Literature DB >> 21257691

Catenovulum agarivorans gen. nov., sp. nov., a peritrichously flagellated, chain-forming, agar-hydrolysing gammaproteobacterium from seawater.

Shulin Yan1, Min Yu1, Yan Wang1, Chen Shen1, Xiao-Hua Zhang1.   

Abstract

A novel Gram-negative, strictly aerobic, agar-hydrolysing bacterium, designated YM01(T), was isolated from seawater samples collected from the Yellow Sea (coastal region of Qingdao, PR China). Cells were rod-shaped, peritrichously flagellated and formed long chains end-to-end. The isolate had an absolute requirement for Na(+) ions, but not seawater, for growth and grew optimally at about 28 °C, in 2% NaCl and at pH 8.0-9.0. The isolate could not be cultured in marine broth 2216, but grew well on marine agar 2216. YM01(T) was able to hydrolyse cellulose, starch, aesculin and Tween 80, but not egg yolk, gelatin, urea or casein. 16S rRNA gene sequence analysis demonstrated that this isolate was unique, showing only 88.4-91.0% sequence similarity to its closest neighbours, including members of the genera Glaciecola (88.4-91.0%), Alteromonas (88.7-89.6%), Aestuariibacter (89.3-90.4%), Salinimonas (89.0%), Bowmanella (90.1-90.3%) and Agarivorans (88.5-89.9%). Phylogenetic analyses demonstrated that strain YM01(T) formed a distinct clade closely related to species of the family Alteromonadaceae within the group of Alteromonas-like gammaproteobacteria. It contained menaquinone MK-7 as the predominant isoprenoid quinone and C(16:0) (38.3%), C(16:1)ω7c and/or iso-C(15:0) 2-OH (29.0%), C(18:1)ω7c (9.3%) and C(10:0) 3-OH (8.2%) as major cellular fatty acids. Phosphatidylethanolamine, phosphatidylglycerol and an aminophospholipid were the major phospholipid constituents. The DNA G+C content was 44.8 mol%. Based on its phenotypic, chemotaxonomic and phylogenetic distinctiveness, strain YM01(T) is considered to represent a novel species in a new genus in the Gammaproteobacteria, for which the name Catenovulum agarivorans gen. nov., sp. nov. is proposed; the type strain of Catenovulum agarivorans is YM01(T) (=CGMCC 1.10245(T) =DSM 23111(T) =JCM 16580(T)).

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Year:  2011        PMID: 21257691     DOI: 10.1099/ijs.0.027565-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Genome sequence of the agar-degrading marine bacterium Alteromonadaceae sp. strain G7.

Authors:  Min-Jung Kwak; Ju Yeon Song; Byung Kwon Kim; Won-Jae Chi; Soon-Kyeong Kwon; Soobeom Choi; Yong-Keun Chang; Soon-Kwang Hong; Jihyun F Kim
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

2.  Genome sequence of the thermostable-agarase-producing marine bacterium Catenovulum agarivorans YM01(T), which reveals the presence of a series of agarase-encoding genes.

Authors:  Xiaochong Shi; Min Yu; Shulin Yan; Sujie Dong; Xiao-Hua Zhang
Journal:  J Bacteriol       Date:  2012-10       Impact factor: 3.490

3.  Draft Genome Sequence of Aestuariibacter halophilus Type Strain JC2043.

Authors:  Sarah A Emsley; Kaysa M Pfannmuller; Blake Ushijima; Jimmy H Saw; Michael O Gaylor; Patrick Videau
Journal:  Microbiol Resour Announc       Date:  2021-12-16

4.  Overexpression and characterization of a novel thermostable β-agarase YM01-3, from marine bacterium Catenovulum agarivorans YM01(T).

Authors:  Fangyuan Cui; Sujie Dong; Xiaochong Shi; Xia Zhao; Xiao-Hua Zhang
Journal:  Mar Drugs       Date:  2014-05-12       Impact factor: 5.118

5.  A Novel Enzyme Portfolio for Red Algal Polysaccharide Degradation in the Marine Bacterium Paraglaciecola hydrolytica S66T Encoded in a Sizeable Polysaccharide Utilization Locus.

Authors:  Mikkel Schultz-Johansen; Pernille K Bech; Rosanna C Hennessy; Mikkel A Glaring; Tristan Barbeyron; Mirjam Czjzek; Peter Stougaard
Journal:  Front Microbiol       Date:  2018-05-03       Impact factor: 5.640

  5 in total

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