Literature DB >> 23209220

Genome sequence of the agar-degrading marine bacterium Alteromonadaceae sp. strain G7.

Min-Jung Kwak1, Ju Yeon Song, Byung Kwon Kim, Won-Jae Chi, Soon-Kyeong Kwon, Soobeom Choi, Yong-Keun Chang, Soon-Kwang Hong, Jihyun F Kim.   

Abstract

Here, we present the high-quality draft genome sequence of the agar-degrading marine gammaproteobacterium Alteromonadaceae sp. strain G7, which was isolated from coastal seawater to be utilized as a bioresource for production of agar-derived biofuels. The 3.91-Mb genome contains a number of genes encoding algal polysaccharide-degrading enzymes such as agarases and sulfatases.

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Year:  2012        PMID： 23209220      PMCID： PMC3510564          DOI： 10.1128/JB.01931-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

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Review 2.  Marine biotechnology for production of food ingredients.

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Journal:  Science       Date:  2012-05-04       Impact factor: 47.728

4.  Recent progress of microbial genome projects in Korea.

Authors:  Haeyoung Jeong; Sung Ho Yoon; Dong-Su Yu; Tae-Kwang Oh; Jihyun F Kim
Journal:  Biotechnol J       Date:  2008-05       Impact factor: 4.677

5.  Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps.

Authors:  Isheng J Tsai; Thomas D Otto; Matthew Berriman
Journal:  Genome Biol       Date:  2010-04-13       Impact factor: 13.583

6.  Polysaccharides of the red algae.

Authors:  Anatolii I Usov
Journal:  Adv Carbohydr Chem Biochem       Date:  2011       Impact factor: 12.200

7.  Catenovulum agarivorans gen. nov., sp. nov., a peritrichously flagellated, chain-forming, agar-hydrolysing gammaproteobacterium from seawater.

Authors:  Shulin Yan; Min Yu; Yan Wang; Chen Shen; Xiao-Hua Zhang
Journal:  Int J Syst Evol Microbiol       Date:  2011-01-21       Impact factor: 2.747

8.  Genomic and proteomic analyses of the agarolytic system expressed by Saccharophagus degradans 2-40.

Authors:  Nathan A Ekborg; Larry E Taylor; Atkinson G Longmire; Bernard Henrissat; Ronald M Weiner; Steven W Hutcheson
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

Review 9.  Agar degradation by microorganisms and agar-degrading enzymes.

Authors:  Won-Jae Chi; Yong-Keun Chang; Soon-Kwang Hong
Journal:  Appl Microbiol Biotechnol       Date:  2012-04-19       Impact factor: 4.813

10.  AutoFACT: an automatic functional annotation and classification tool.

Authors:  Liisa B Koski; Michael W Gray; B Franz Lang; Gertraud Burger
Journal:  BMC Bioinformatics       Date:  2005-06-16       Impact factor: 3.169
  10 in total
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1.  Genome Sequence of Microbulbifer mangrovi DD-13T Reveals Its Versatility to Degrade Multiple Polysaccharides.

Authors:  Md Imran; Poonam Pant; Yogini P Shanbhag; Samir V Sawant; Sanjeev C Ghadi
Journal:  Mar Biotechnol (NY)       Date:  2017-02-04       Impact factor: 3.619
  1 in total

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