Literature DB >> 21247088

Comment on "urea-mediated protein denaturation: a consensus view".

Ruhong Zhou1, Jingyuan Li, Lan Hua, Zaixing Yang, B J Berne.   

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Year:  2011        PMID： 21247088      PMCID： PMC3050030          DOI： 10.1021/jp105160a

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN： 1520-5207            Impact factor:   2.991


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  19 in total

1.  Molecular dynamics simulations of end-to-end contact formation in hydrocarbon chains in water and aqueous urea solution.

Authors:  Raymond D Mountain; D Thirumalai
Journal:  J Am Chem Soc       Date:  2003-02-19       Impact factor: 15.419

2.  THE SOLUBILITY OF AMINO ACIDS AND RELATED COMPOUNDS IN AQUEOUS UREA SOLUTIONS.

Authors:  Y NOZAKI; C TANFORD
Journal:  J Biol Chem       Date:  1963-12       Impact factor: 5.157

3.  THE EFFECT OF COMPOUNDS OF THE UREA-GUANIDINIUM CLASS ON THE ACTIVITY COEFFICIENT OF ACETYLTETRAGLYCINE ETHYL ESTER AND RELATED COMPOUNDS.

Authors:  D R ROBINSON; W P JENCKS
Journal:  J Am Chem Soc       Date:  1965-06-05       Impact factor: 15.419

4.  Scalable molecular dynamics with NAMD.

Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

5.  Destruction of long-range interactions by a single mutation in lysozyme.

Authors:  Ruhong Zhou; Maria Eleftheriou; Ajay K Royyuru; Bruce J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

6.  Urea-induced drying of carbon nanotubes suggests existence of a dry globule-like transient state during chemical denaturation of proteins.

Authors:  Payel Das; Ruhong Zhou
Journal:  J Phys Chem B       Date:  2010-04-29       Impact factor: 2.991

7.  Aqueous urea solutions: structure, energetics, and urea aggregation.

Authors:  Martin C Stumpe; Helmut Grubmüller
Journal:  J Phys Chem B       Date:  2007-05-11       Impact factor: 2.991

8.  Urea impedes the hydrophobic collapse of partially unfolded proteins.

Authors:  Martin C Stumpe; Helmut Grubmüller
Journal:  Biophys J       Date:  2009-05-06       Impact factor: 4.033

9.  Interactions between hydrophobic and ionic solutes in aqueous guanidinium chloride and urea solutions: lessons for protein denaturation mechanism.

Authors:  Edward P O'Brien; Ruxandra I Dima; Bernard Brooks; D Thirumalai
Journal:  J Am Chem Soc       Date:  2007-05-16       Impact factor: 15.419

10.  Polar or apolar--the role of polarity for urea-induced protein denaturation.

Authors:  Martin C Stumpe; Helmut Grubmüller
Journal:  PLoS Comput Biol       Date:  2008-11-14       Impact factor: 4.475
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  6 in total

1.  A hypothesis to reconcile the physical and chemical unfolding of proteins.

Authors:  Guilherme A P de Oliveira; Jerson L Silva
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

2.  Structure and dynamics of urea/water mixtures investigated by vibrational spectroscopy and molecular dynamics simulation.

Authors:  J K Carr; L E Buchanan; J R Schmidt; M T Zanni; J L Skinner
Journal:  J Phys Chem B       Date:  2013-07-25       Impact factor: 2.991

Review 3.  A Comprehensive Guide for Performing Sample Preparation and Top-Down Protein Analysis.

Authors:  Matthew P Padula; Iain J Berry; Matthew B O Rourke; Benjamin B A Raymond; Jerran Santos; Steven P Djordjevic
Journal:  Proteomes       Date:  2017-04-07

4.  Properties of the cuticular proteins of Anopheles gambiae as revealed by serial extraction of adults.

Authors:  Yihong Zhou; Majors J Badgett; Lynne Billard; John Hunter Bowen; Ron Orlando; Judith H Willis
Journal:  PLoS One       Date:  2017-04-18       Impact factor: 3.240

5.  G-quadruplex binding ability of TLS/FUS depends on the β-spiral structure of the RGG domain.

Authors:  Ryota Yagi; Takatsugu Miyazaki; Takanori Oyoshi
Journal:  Nucleic Acids Res       Date:  2018-07-06       Impact factor: 16.971

6.  Aggregation-primed molten globule conformers of the p53 core domain provide potential tools for studying p53C aggregation in cancer.

Authors:  Murilo M Pedrote; Guilherme A P de Oliveira; Adriani L Felix; Michelle F Mota; Mayra de A Marques; Iaci N Soares; Anwar Iqbal; Douglas R Norberto; Andre M O Gomes; Enrico Gratton; Elio A Cino; Jerson L Silva
Journal:  J Biol Chem       Date:  2018-05-31       Impact factor: 5.157
  6 in total

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