| Literature DB >> 21245951 |
Axel Seher1, Joachim Nickel, Thomas D Mueller, Susanne Kneitz, Susanne Gebhardt, Tobias Meyer ter Vehn, Guenther Schlunck, Walter Sebald.
Abstract
PURPOSE: The biologic relevance of human connective tissue growth factor (hCTGF) for primary human tenon fibroblasts (HTFs) was investigated by RNA expression profiling using affymetrix(TM) oligonucleotide array technology to identify genes that are regulated by hCTGF.Entities:
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Year: 2011 PMID: 21245951 PMCID: PMC3021567
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
RT-PCR primer pairs.
| GACCAGTCAACAGGGGACAT | 61.8 | 194 | |
| ACACTTCGTGGGGTCCTTTT | 61.0 | | |
| CCCGAGTGACAAGCCTGTAG | 62.0 | 151 | |
| GAGGTACAGGCCCTCTGATG | 62.0 | | |
| GGGCCTCAAGGAAAAGAATC | 58.3 | 205 | |
| TTCTGCTTGAGAGGTGCTGA | 59.5 | | |
| AGGAGACTTGCCTGGTGAAA | 60.3 | 180 | |
| CAGGGGTGGTTATTGCATCT | 58.6 | | |
| AGGGTTGCCAGATGCAATAC | 58.3 | 213 | |
| CCTTGGCCTCAATTTTGCTA | 56.4 | | |
| GAAAGCTTGCCTCAATCCTG | 57.5 | 214 | |
| TCCTAAGCGATGCTCAAACA | 56.7 | | |
| GGGAAGCAAGTTTGTCTGGA | 59.4 | 237 | |
| CTTTCCCCCACACTCTTCAA | 59.8 |
Figure 1SDS–PAGE and western blot of rhCTGF. rhCTGF was expressed in HEK293T cells and purified by heparin and BMP-2 affinity chromatography. The purified protein (2 μg) was analyzed by (A) coomassie blue stained SDS–PAGE and (B) western blot using a α-CTGF antibody.
Figure 2Sensorgrams of BIAcore measurements. Binding of CTGF at the indicated concentrations to immobilized BMP-2 was recorded at a flow-rate of 10 μl/min at 25 °C. The association phase was set to five and the dissociation phase to three min. Specific binding of hCTGF to immobilized BMP-2 reveals an apparent KD value of ~400 nM.
Figure 3rhCTGF induced proliferation in primary tenon fibroblasts. HTFs were starved for 24 h and (A) subsequently stimulated for 48 h with increasing CTGF concentrations up to 4 μg/ml and 10% FCS as positive control and (B) for different time points between 24 and 72 h with a concentration of 4 μg/ml rhCTGF. In both experiments [3H]-thymidine DNA incorporation was measured after a 24 h incubation intervall by RITA.
Top 10 upregulated genes in HTFs after hCTGF stimulation.
| 1 | chemokine (C-X-C motif) ligand 6 | 14.3 | 0.01 | |
| 2 | chemokine (C-X-C motif) ligand 1 | 9.4 | 0.15 | |
| 3 | interleukin 8 | 5.6 | 0.18 | |
| 4 | tumor necrosis factor, alpha-induced protein 6 | 5.0 | 0.18 | |
| 5 | interleukin 6 (interferon, beta 2) | 4.9 | 0.18 | |
| 6 | serpin peptidase inhibitor, clade E | 4.7 | 0.05 | |
| 7 | chemokine (C-C motif) ligand 2 | 4.3 | 0.05 | |
| 8 | kinesin family member 20A | 4.1 | 0.19 | |
| 9 | interferon, alpha-inducible protein (clone IFI-6–16) | 3.9 | 0.18 | |
| 10 | ribonucleotide reductase M2 polypeptide | 3.3 | 0.37 |
Top 10 down-regulated genes in HTFs after hCTGF stimulation.
| 1 | platelet derived growth factor D | −3.1 | 0.30 | |
| 2 | osteoglycin (osteoinductive factor, mimecan) | −3.0 | 0.08 | |
| 3 | osteomodulin | −3.0 | 0.23 | |
| 4 | chemokine (C-C motif) receptor-like 1 | −2.7 | 0.24 | |
| 5 | SRY (sex determining region Y)-box 4 | −2.5 | 0.05 | |
| 6 | matrix Gla protein | −2.4 | 0.05 | |
| 7 | Ras association (RalGDS/AF-6) domain family 2 | −2.2 | 0.23 | |
| 8 | selenoprotein P, plasma, 1 | −2.2 | 0.18 | |
| 9 | alcohol dehydrogenase IB (class I), beta polypeptide | −2.2 | 0.41 | |
| 10 | v-maf musculoaponeurotic fibrosarcoma oncogene homolog B | −2.2 | 0.15 |
Figure 4Heat map of differentially expressed genes in HTFs after CTGF stimulation. Differentially expressed genes were analyzed and categorized via “gene ontology.” The selected categories (A) “response to wounding and inflammatory response,” (B) “extracellular matrix,” (C) “anti-apoptosis,” and (D) “cell proliferation” are shown. Color represent measured signal intensity from lowest (green) to highest (red) value.
Figure 5Expression level of inflammatory genes in human tenon fibroblasts after CTGF stimulation. HTFs were stimulated with 6 μg/ml CTGF for 48 h. Total RNA was isolated and gene expression was analyzed via affymetrix array. Selected genes out of the catagory “inflammation” were validated using real time RT–PCR. The figure shows the fold induction measured by affymetrix arrays compared to the results of real time RT–PCR (RT) for every single donor using the RNA used in array analysis. The results were additionally validated for every donor in an independent experiment (donors were stimulated again with CTGF). Isolated RNA was analyzed via RT–PCR (Repeat). RT–PCR was performed twice for every single experiment.