Literature DB >> 21233508

Challenges of antibacterial discovery.

Lynn L Silver1.   

Abstract

The discovery of novel small-molecule antibacterial drugs has been stalled for many years. The purpose of this review is to underscore and illustrate those scientific problems unique to the discovery and optimization of novel antibacterial agents that have adversely affected the output of the effort. The major challenges fall into two areas: (i) proper target selection, particularly the necessity of pursuing molecular targets that are not prone to rapid resistance development, and (ii) improvement of chemical libraries to overcome limitations of diversity, especially that which is necessary to overcome barriers to bacterial entry and proclivity to be effluxed, especially in Gram-negative organisms. Failure to address these problems has led to a great deal of misdirected effort.

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Year:  2011        PMID: 21233508      PMCID: PMC3021209          DOI: 10.1128/CMR.00030-10

Source DB:  PubMed          Journal:  Clin Microbiol Rev        ISSN: 0893-8512            Impact factor:   26.132


  368 in total

Review 1.  Late stage antibacterial drugs in the clinical pipeline.

Authors:  Steven J Projan; Patricia A Bradford
Journal:  Curr Opin Microbiol       Date:  2007-10-22       Impact factor: 7.934

2.  Functional classification of drugs by properties of their pairwise interactions.

Authors:  Pamela Yeh; Ariane I Tschumi; Roy Kishony
Journal:  Nat Genet       Date:  2006-03-19       Impact factor: 38.330

Review 3.  Cell-division inhibitors: new insights for future antibiotics.

Authors:  Rowena L Lock; Elizabeth J Harry
Journal:  Nat Rev Drug Discov       Date:  2008-04       Impact factor: 84.694

Review 4.  Predicting antibiotic resistance.

Authors:  José L Martínez; Fernando Baquero; Dan I Andersson
Journal:  Nat Rev Microbiol       Date:  2007-12       Impact factor: 60.633

5.  New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays.

Authors:  Jonathan B Baell; Georgina A Holloway
Journal:  J Med Chem       Date:  2010-04-08       Impact factor: 7.446

6.  Temperature-sensitive mutants of Escherichia coli K-12 with low activity of the diaminopimelic acid adding enzyme.

Authors:  E J Lugtenberg; A v Schijndel-van Dam
Journal:  J Bacteriol       Date:  1972-04       Impact factor: 3.490

7.  Phenylimidazole derivatives of 4-pyridone as dual inhibitors of bacterial enoyl-acyl carrier protein reductases FabI and FabK.

Authors:  Hideo Kitagawa; Tomohiro Ozawa; Sho Takahata; Maiko Iida; Jun Saito; Mototsugu Yamada
Journal:  J Med Chem       Date:  2007-08-22       Impact factor: 7.446

8.  Phenyl thiazolyl urea and carbamate derivatives as new inhibitors of bacterial cell-wall biosynthesis.

Authors:  Gerardo D Francisco; Zhong Li; J Donald Albright; Nancy H Eudy; Alan H Katz; Peter J Petersen; Pornpen Labthavikul; Guy Singh; Youjun Yang; Beth A Rasmussen; Yang-I Lin; Tarek S Mansour
Journal:  Bioorg Med Chem Lett       Date:  2004-01-05       Impact factor: 2.823

9.  Structure-based discovery of inhibitors of the YycG histidine kinase: new chemical leads to combat Staphylococcus epidermidis infections.

Authors:  Zhiqiang Qin; Jian Zhang; Bin Xu; Lili Chen; Yang Wu; Xiaomei Yang; Xu Shen; Soeren Molin; Antoine Danchin; Hualiang Jiang; Di Qu
Journal:  BMC Microbiol       Date:  2006-11-10       Impact factor: 3.605

10.  A multidimensional strategy to detect polypharmacological targets in the absence of structural and sequence homology.

Authors:  Jacob D Durrant; Rommie E Amaro; Lei Xie; Michael D Urbaniak; Michael A J Ferguson; Antti Haapalainen; Zhijun Chen; Anne Marie Di Guilmi; Frank Wunder; Philip E Bourne; J Andrew McCammon
Journal:  PLoS Comput Biol       Date:  2010-01-22       Impact factor: 4.475

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  350 in total

1.  Nanoparticles functionalized with ampicillin destroy multiple-antibiotic-resistant isolates of Pseudomonas aeruginosa and Enterobacter aerogenes and methicillin-resistant Staphylococcus aureus.

Authors:  Ashley N Brown; Kathryn Smith; Tova A Samuels; Jiangrui Lu; Sherine O Obare; Maria E Scott
Journal:  Appl Environ Microbiol       Date:  2012-01-27       Impact factor: 4.792

2.  In vitro validation of acetyltransferase activity of GlmU as an antibacterial target in Haemophilus influenzae.

Authors:  Ed T Buurman; Beth Andrews; Ning Gao; Jun Hu; Thomas A Keating; Sushmita Lahiri; Ludovic R Otterbein; Arthur D Patten; Suzanne S Stokes; Adam B Shapiro
Journal:  J Biol Chem       Date:  2011-10-07       Impact factor: 5.157

3.  Growing unculturable bacteria.

Authors:  Eric J Stewart
Journal:  J Bacteriol       Date:  2012-06-01       Impact factor: 3.490

Review 4.  Bacterial fatty acid metabolism in modern antibiotic discovery.

Authors:  Jiangwei Yao; Charles O Rock
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2016-09-23       Impact factor: 4.698

5.  The identification of inhibitory compounds of Rickettsia prowazekii methionine aminopeptidase for antibacterial applications.

Authors:  Travis R Helgren; Elif S Seven; Congling Chen; Thomas E Edwards; Bart L Staker; Jan Abendroth; Peter J Myler; James R Horn; Timothy J Hagen
Journal:  Bioorg Med Chem Lett       Date:  2018-03-15       Impact factor: 2.823

6.  Biological evaluation of benzothiazole ethyl urea inhibitors of bacterial type II topoisomerases.

Authors:  Neil R Stokes; Helena B Thomaides-Brears; Stephanie Barker; James M Bennett; Joanne Berry; Ian Collins; Lloyd G Czaplewski; Vicki Gamble; Paul Lancett; Alastair Logan; Christopher J Lunniss; Hilary Peasley; Stéphanie Pommier; Daniel Price; Carol Smee; David J Haydon
Journal:  Antimicrob Agents Chemother       Date:  2013-09-16       Impact factor: 5.191

7.  Structure-activity studies of divin: an inhibitor of bacterial cell division.

Authors:  Maoquan Zhou; Ye-Jin Eun; Ilia A Guzei; Douglas B Weibel
Journal:  ACS Med Chem Lett       Date:  2013-09-12       Impact factor: 4.345

8.  All signals lost.

Authors:  Kaelyn E Wilke; Erin E Carlson
Journal:  Sci Transl Med       Date:  2013-09-18       Impact factor: 17.956

9.  Bacterial cytological profiling rapidly identifies the cellular pathways targeted by antibacterial molecules.

Authors:  Poochit Nonejuie; Michael Burkart; Kit Pogliano; Joe Pogliano
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-17       Impact factor: 11.205

10.  Beta-lactam antibiotics induce a lethal malfunctioning of the bacterial cell wall synthesis machinery.

Authors:  Hongbaek Cho; Tsuyoshi Uehara; Thomas G Bernhardt
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

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