Literature DB >> 21221581

A primer on a hepatocellular carcinoma bioresource bank using the cancer genome atlas guidelines: practical issues and pitfalls.

N Thao T Nguyen1, Ron T Cotton, Theresa R Harring, Jacfranz J Guiteau, Marie-Claude Gingras, David A Wheeler, Christine A O'Mahony, Richard A Gibbs, F Charles Brunicardi, John A Goss.   

Abstract

BACKGROUND: Since the advent of the human genome, the era of personalized genomic medicine is indisputably in progress.
METHODS: In an effort to contribute to the evolving knowledge of genomic medicine, we have aimed directly at building a bioresource bank for hepatocellular carcinoma. This tumor bank is based on the rigorous guidelines set forth by the National Cancer Institute, and it offers analytes to help elucidate the mechanisms of progression from cirrhosis to malignancy, risk factors for recurrence, and applicability of current treatment options to a diverse group of people.
CONCLUSIONS: Surgeons have a privileged position between patients (and their cancer) and the benches of basic science. Thus, we offer a primer based on our own experiences, from which surgeons may take elements to build their own bioresource bank for use in collaboration with others. We highlight some practicalities and pitfalls that could be overlooked, as well as a discussion of possible solutions.

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Year:  2011        PMID: 21221581      PMCID: PMC4083491          DOI: 10.1007/s00268-010-0953-y

Source DB:  PubMed          Journal:  World J Surg        ISSN: 0364-2313            Impact factor:   3.352


  21 in total

Review 1.  International efforts to develop biospecimen best practices.

Authors:  Jimmie B Vaught; Elodie Caboux; Pierre Hainaut
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-16       Impact factor: 4.254

2.  Some principles and practices of genetic biobanking studies.

Authors:  A K Macleod; D C M Liewald; M M McGilchrist; A D Morris; S M Kerr; D J Porteous
Journal:  Eur Respir J       Date:  2009-02       Impact factor: 16.671

Review 3.  New concepts of biobanks--strategic chance for uro-oncology.

Authors:  Peter J Goebell; Manuel M Morente
Journal:  Urol Oncol       Date:  2010 Jul-Aug       Impact factor: 3.498

4.  Biobanking, consent, and commercialization in international genetics research: the Type 1 Diabetes Genetics Consortium.

Authors:  Mark A Hall; Nancy M P King; Letitia H Perdue; Joan E Hilner; Beena Akolkar; Carla J Greenbaum; Catherine McKeon
Journal:  Clin Trials       Date:  2010       Impact factor: 2.486

5.  Privacy and property in the biobank context.

Authors:  Lars Oystein Ursin
Journal:  HEC Forum       Date:  2010-09

6.  2009 Biospecimen research network symposium: advancing cancer research through biospecimen science.

Authors:  Helen M Moore; Carolyn C Compton; Mark D Lim; Jimmie Vaught; Katerina N Christiansen; Joe Alper
Journal:  Cancer Res       Date:  2009-08-25       Impact factor: 12.701

Review 7.  Biobanking for better healthcare.

Authors:  Peter H J Riegman; Manuel M Morente; Fay Betsou; Pasquale de Blasio; Peter Geary
Journal:  Mol Oncol       Date:  2008-07-30       Impact factor: 6.603

8.  Influence of evolution in tumor biobanking on the interpretation of translational research.

Authors:  Rebecca O Barnes; Michelle Parisien; Leigh C Murphy; Peter H Watson
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-12       Impact factor: 4.254

Review 9.  Strategies to promote translational research within the European Organisation for Research and Treatment of Cancer (EORTC) Head and Neck Cancer Group: a report from the Translational Research Subcommittee.

Authors:  A Psyrri; L Licitra; D Lacombe; E Schuuring; W Budach; M Ozsahin; R Knecht; J B Vermorken; J A Langendijk
Journal:  Ann Oncol       Date:  2010-03-19       Impact factor: 32.976

10.  Biobanks for genomics and genomics for biobanks.

Authors:  Anne Cambon-Thomsen; Pascal Ducournau; Pierre-Antoine Gourraud; David Pontille
Journal:  Comp Funct Genomics       Date:  2003
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  2 in total

Review 1.  Role of Biobanks for Cancer Research and Precision Medicine in Hepatocellular Carcinoma.

Authors:  Peyda Korhan; Sanem Tercan Avcı; Yeliz Yılmaz; Yasemin Öztemur Islakoğlu; Neşe Atabey
Journal:  J Gastrointest Cancer       Date:  2021-11-22

2.  Shift in VEGFA isoform balance towards more angiogenic variants is associated with tumor stage and differentiation of human hepatocellular carcinoma.

Authors:  Mikhail S Chesnokov; Polina A Khesina; Darya A Shavochkina; Inna F Kustova; Leonid M Dyakov; Olga V Morozova; Nikolai S Mugue; Nikolay E Kudashkin; Ekaterina A Moroz; Yuri I Patyutko; Natalia L Lazarevich
Journal:  PeerJ       Date:  2018-06-05       Impact factor: 2.984

  2 in total

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