Literature DB >> 21211722

DNA repair factor APLF is a histone chaperone.

Pawan Vinod Mehrotra1, Dragana Ahel, Daniel P Ryan, Ria Weston, Nicola Wiechens, Rolf Kraehenbuehl, Tom Owen-Hughes, Ivan Ahel.   

Abstract

Poly(ADP-ribosyl)ation plays a major role in DNA repair, where it regulates chromatin relaxation as one of the critical events in the repair process. However, the molecular mechanism by which poly(ADP-ribose) modulates chromatin remains poorly understood. Here we identify the poly(ADP-ribose)-regulated protein APLF as a DNA-damage-specific histone chaperone. APLF preferentially binds to the histone H3/H4 tetramer via its C-terminal acidic motif, which is homologous to the motif conserved in the histone chaperones of the NAP1L family (NAP1L motif). We further demonstrate that APLF exhibits histone chaperone activities in a manner that is dependent on its acidic domain and that the NAP1L motif is critical for the repair capacity of APLF in vivo. Finally, we identify structural analogs of APLF in lower eukaryotes with the ability to bind histones and localize to the sites of DNA-damage-induced poly(ADP-ribosyl)ation. Collectively, these findings define the involvement of histone chaperones in poly(ADP-ribose)-regulated DNA repair reactions. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21211722      PMCID: PMC3443741          DOI: 10.1016/j.molcel.2010.12.008

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  24 in total

1.  Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly.

Authors:  Alexandra Lusser; Debra L Urwin; James T Kadonaga
Journal:  Nat Struct Mol Biol       Date:  2005-01-09       Impact factor: 15.369

2.  The structure of nucleosome assembly protein 1.

Authors:  Young-Jun Park; Karolin Luger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

Review 3.  Poly(ADP-ribosyl)ation by PARP-1: 'PAR-laying' NAD+ into a nuclear signal.

Authors:  Mi Young Kim; Tong Zhang; W Lee Kraus
Journal:  Genes Dev       Date:  2005-09-01       Impact factor: 11.361

4.  The histone chaperone Nap1 promotes nucleosome assembly by eliminating nonnucleosomal histone DNA interactions.

Authors:  Andrew J Andrews; Xu Chen; Alexander Zevin; Laurie A Stargell; Karolin Luger
Journal:  Mol Cell       Date:  2010-03-26       Impact factor: 17.970

5.  APLF (C2orf13) facilitates nonhomologous end-joining and undergoes ATM-dependent hyperphosphorylation following ionizing radiation.

Authors:  Chloe J Macrae; Richard D McCulloch; Jarkko Ylanko; Daniel Durocher; C Anne Koch
Journal:  DNA Repair (Amst)       Date:  2008-02-01

6.  APLF (C2orf13) is a novel component of poly(ADP-ribose) signaling in mammalian cells.

Authors:  Stuart L Rulten; Felipe Cortes-Ledesma; Liandi Guo; Natasha J Iles; Keith W Caldecott
Journal:  Mol Cell Biol       Date:  2008-05-12       Impact factor: 4.272

7.  A novel human AP endonuclease with conserved zinc-finger-like motifs involved in DNA strand break responses.

Authors:  Shin-ichiro Kanno; Hiroyuki Kuzuoka; Shigeru Sasao; Zehui Hong; Li Lan; Satoshi Nakajima; Akira Yasui
Journal:  EMBO J       Date:  2007-03-29       Impact factor: 11.598

8.  Human Xip1 (C2orf13) is a novel regulator of cellular responses to DNA strand breaks.

Authors:  Simon Bekker-Jensen; Kasper Fugger; Jannie Rendtlew Danielsen; Irina Gromova; Maxwell Sehested; Julio Celis; Jiri Bartek; Jiri Lukas; Niels Mailand
Journal:  J Biol Chem       Date:  2007-05-16       Impact factor: 5.157

9.  Identification of multiple distinct Snf2 subfamilies with conserved structural motifs.

Authors:  Andrew Flaus; David M A Martin; Geoffrey J Barton; Tom Owen-Hughes
Journal:  Nucleic Acids Res       Date:  2006-05-31       Impact factor: 16.971

10.  Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose).

Authors:  Sebastian Eustermann; Christoph Brockmann; Pawan Vinod Mehrotra; Ji-Chun Yang; David Loakes; Stephen C West; Ivan Ahel; David Neuhaus
Journal:  Nat Struct Mol Biol       Date:  2010-01-24       Impact factor: 15.369

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  75 in total

Review 1.  More than just a focus: The chromatin response to DNA damage and its role in genome integrity maintenance.

Authors:  Jiri Lukas; Claudia Lukas; Jiri Bartek
Journal:  Nat Cell Biol       Date:  2011-10-03       Impact factor: 28.824

Review 2.  The right place at the right time: chaperoning core histone variants.

Authors:  Francesca Mattiroli; Sheena D'Arcy; Karolin Luger
Journal:  EMBO Rep       Date:  2015-10-12       Impact factor: 8.807

Review 3.  Structural insights into NHEJ: building up an integrated picture of the dynamic DSB repair super complex, one component and interaction at a time.

Authors:  Gareth J Williams; Michal Hammel; Sarvan Kumar Radhakrishnan; Dale Ramsden; Susan P Lees-Miller; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2014-03-20

Review 4.  What Combined Measurements From Structures and Imaging Tell Us About DNA Damage Responses.

Authors:  Chris A Brosey; Zamal Ahmed; Susan P Lees-Miller; John A Tainer
Journal:  Methods Enzymol       Date:  2017-05-29       Impact factor: 1.600

Review 5.  Fly Fishing for Histones: Catch and Release by Histone Chaperone Intrinsically Disordered Regions and Acidic Stretches.

Authors:  Christopher Warren; David Shechter
Journal:  J Mol Biol       Date:  2017-06-10       Impact factor: 5.469

Review 6.  Variants of core histones and their roles in cell fate decisions, development and cancer.

Authors:  Marcus Buschbeck; Sandra B Hake
Journal:  Nat Rev Mol Cell Biol       Date:  2017-02-01       Impact factor: 94.444

7.  MacroH2A histone variants limit chromatin plasticity through two distinct mechanisms.

Authors:  Marek Kozlowski; David Corujo; Michael Hothorn; Iva Guberovic; Imke K Mandemaker; Charlotte Blessing; Judith Sporn; Arturo Gutierrez-Triana; Rebecca Smith; Thomas Portmann; Mathias Treier; Klaus Scheffzek; Sebastien Huet; Gyula Timinszky; Marcus Buschbeck; Andreas G Ladurner
Journal:  EMBO Rep       Date:  2018-09-03       Impact factor: 8.807

Review 8.  Non-homologous DNA end joining and alternative pathways to double-strand break repair.

Authors:  Howard H Y Chang; Nicholas R Pannunzio; Noritaka Adachi; Michael R Lieber
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

Review 9.  Non-homologous end joining: emerging themes and unanswered questions.

Authors:  Sarvan Kumar Radhakrishnan; Nicholas Jette; Susan P Lees-Miller
Journal:  DNA Repair (Amst)       Date:  2014-02-26

10.  DNA repair factor APLF acts as a H2A-H2B histone chaperone through binding its DNA interaction surface.

Authors:  Ivan Corbeski; Klemen Dolinar; Hans Wienk; Rolf Boelens; Hugo van Ingen
Journal:  Nucleic Acids Res       Date:  2018-08-21       Impact factor: 16.971

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