Literature DB >> 21206062

Structures of human thymidylate synthase R163K with dUMP, FdUMP and glutathione show asymmetric ligand binding.

Lydia M Gibson1, Lesa R Celeste, Leslie L Lovelace, Lukasz Lebioda.   

Abstract

Thymidylate synthase (TS) is a well validated target in cancer chemotherapy. Here, a new crystal form of the R163K variant of human TS (hTS) with five subunits per asymmetric part of the unit cell, all with loop 181-197 in the active conformation, is reported. This form allows binding studies by soaking crystals in artificial mother liquors containing ligands that bind in the active site. Using this approach, crystal structures of hTS complexes with FdUMP and dUMP were obtained, indicating that this form should facilitate high-throughput analysis of hTS complexes with drug candidates. Crystal soaking experiments using oxidized glutathione revealed that hTS binds this ligand. Interestingly, the two types of binding observed are both asymmetric. In one subunit of the physiological dimer covalent modification of the catalytic nucleophile Cys195 takes place, while in another dimer a noncovalent adduct with reduced glutathione is formed in one of the active sites.

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Year:  2010        PMID: 21206062      PMCID: PMC3016017          DOI: 10.1107/S0907444910044732

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  24 in total

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-11-01

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Authors:  Robert M Stroud; Janet S Finer-Moore
Journal:  Biochemistry       Date:  2003-01-21       Impact factor: 3.162

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Journal:  Arch Biochem Biophys       Date:  1958-12       Impact factor: 4.013

4.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

5.  Crystal structure of a deletion mutant of human thymidylate synthase Delta (7-29) and its ternary complex with Tomudex and dUMP.

Authors:  R Almog; C A Waddling; F Maley; G F Maley; P Van Roey
Journal:  Protein Sci       Date:  2001-05       Impact factor: 6.725

6.  The structural mechanism for half-the-sites reactivity in an enzyme, thymidylate synthase, involves a relay of changes between subunits.

Authors:  A C Anderson; R H O'Neil; W L DeLano; R M Stroud
Journal:  Biochemistry       Date:  1999-10-19       Impact factor: 3.162

7.  Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability .

Authors:  Xiao Huang; Lydia M Gibson; Brittnaie J Bell; Leslie L Lovelace; Maria Marjorette O Peña; Franklin G Berger; Sondra H Berger; Lukasz Lebioda
Journal:  Biochemistry       Date:  2010-03-23       Impact factor: 3.162

8.  Cooperative inhibition of human thymidylate synthase by mixtures of active site binding and allosteric inhibitors.

Authors:  Leslie L Lovelace; Lydia M Gibson; Lukasz Lebioda
Journal:  Biochemistry       Date:  2007-02-13       Impact factor: 3.162

9.  Mode of binding of folate analogs to thymidylate synthase. Evidence for two asymmetric but interactive substrate binding sites.

Authors:  I K Dev; W S Dallas; R Ferone; M Hanlon; D D McKee; B B Yates
Journal:  J Biol Chem       Date:  1994-01-21       Impact factor: 5.157

10.  Crystal structure of human thymidylate synthase: a structural mechanism for guiding substrates into the active site.

Authors:  C A Schiffer; I J Clifton; V J Davisson; D V Santi; R M Stroud
Journal:  Biochemistry       Date:  1995-12-19       Impact factor: 3.162

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  5 in total

1.  Virtual screening reveals allosteric inhibitors of the Toxoplasma gondii thymidylate synthase-dihydrofolate reductase.

Authors:  Hitesh Sharma; Mark J Landau; Todd J Sullivan; Vidya P Kumar; Markus K Dahlgren; William L Jorgensen; Karen S Anderson
Journal:  Bioorg Med Chem Lett       Date:  2013-12-31       Impact factor: 2.823

2.  Crystal structure of the active form of native human thymidylate synthase in the absence of bound substrates.

Authors:  P Deschamps; S Réty; J Bareille; N Leulliot
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-05-25       Impact factor: 1.056

3.  Selective peptide inhibitors of bifunctional thymidylate synthase-dihydrofolate reductase from Toxoplasma gondii provide insights into domain-domain communication and allosteric regulation.

Authors:  Mark J Landau; Hitesh Sharma; Karen S Anderson
Journal:  Protein Sci       Date:  2013-08-01       Impact factor: 6.725

4.  Analysis of mRNA recognition by human thymidylate synthase.

Authors:  Nicholas D Brunn; Sergey M Dibrov; Melody B Kao; Majid Ghassemian; Thomas Hermann
Journal:  Biosci Rep       Date:  2014-12-23       Impact factor: 3.840

Review 5.  Analogues of Pyrimidine Nucleosides as Mycobacteria Growth Inhibitors.

Authors:  Liudmila A Alexandrova; Anastasia L Khandazhinskaya; Elena S Matyugina; Dmitriy A Makarov; Sergey N Kochetkov
Journal:  Microorganisms       Date:  2022-06-27
  5 in total

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