Literature DB >> 21204557

Automated peak detection and matching algorithm for gas chromatography-differential mobility spectrometry.

Sim S Fong1, Preshious Rearden, Chitra Kanchagar, Christopher Sassetti, Jose Trevejo, Richard G Brereton.   

Abstract

A gas chromatography-differential mobility spectrometer (GC-DMS) involves a portable and selective mass analyzer that may be applied to chemical detection in the field. Existing approaches examine whole profiles and do not attempt to resolve peaks. A new approach for peak detection in the 2D GC-DMS chromatograms is reported. This method is demonstrated on three case studies: a simulated case study; a case study of headspace gas analysis of Mycobacterium tuberculosis (MTb) cultures consisting of three matching GC-DMS and GC-MS chromatograms; a case study consisting of 41 GC-DMS chromatograms of headspace gas analysis of MTb culture and media.

Entities:  

Mesh:

Year:  2011        PMID: 21204557      PMCID: PMC3694766          DOI: 10.1021/ac102110y

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  17 in total

Review 1.  Comprehensive two-dimensional gas chromatography: a hyphenated method with strong coupling between the two dimensions.

Authors:  J B Phillips; J Beens
Journal:  J Chromatogr A       Date:  1999-09-24       Impact factor: 4.759

2.  Fast quantitative characterisation of differential mobility responses.

Authors:  Catherine A Veasey; C L P Thomas
Journal:  Analyst       Date:  2004-01-20       Impact factor: 4.616

3.  Development of an algorithm for peak detection in comprehensive two-dimensional chromatography.

Authors:  Sonja Peters; Gabriel Vivó-Truyols; Philip J Marriott; Peter J Schoenmakers
Journal:  J Chromatogr A       Date:  2006-11-21       Impact factor: 4.759

4.  Increasing analytical space in gas chromatography-differential mobility spectrometry with dispersion field amplitude programming.

Authors:  M Basanta; D Singh; S Fowler; I Wilson; R Dennis; C L P Thomas
Journal:  J Chromatogr A       Date:  2007-10-11       Impact factor: 4.759

5.  Optimising cell temperature and dispersion field strength for the screening for putrescine and cadaverine with thermal desorption-gas chromatography-differential mobility spectrometry.

Authors:  M Ali Awan; I Fleet; C L Paul Thomas
Journal:  Anal Chim Acta       Date:  2008-02-12       Impact factor: 6.558

6.  Pretreatment of mass spectral profiles: application to proteomic data.

Authors:  Reidar Arneberg; Tarja Rajalahti; Kristian Flikka; Frode S Berven; Ann C Kroksveen; Magnus Berle; Kjell-Morten Myhr; Christian A Vedeler; Rune J Ulvik; Olav M Kvalheim
Journal:  Anal Chem       Date:  2007-08-21       Impact factor: 6.986

7.  Discrimination of bacteria using pyrolysis-gas chromatography-differential mobility spectrometry (Py-GC-DMS) and chemometrics.

Authors:  William Cheung; Yu Xu; C L Paul Thomas; Royston Goodacre
Journal:  Analyst       Date:  2008-12-16       Impact factor: 4.616

8.  Two-dimensional wavelet analysis based classification of gas chromatogram differential mobility spectrometry signals.

Authors:  Weixiang Zhao; Shankar Sankaran; Ana M Ibáñez; Abhaya M Dandekar; Cristina E Davis
Journal:  Anal Chim Acta       Date:  2009-05-25       Impact factor: 6.558

9.  Microfabricated differential mobility spectrometry with pyrolysis gas chromatography for chemical characterization of bacteria.

Authors:  Hartwig Schmidt; Fathulla Tadjimukhamedov; Isabelle V Mohrenz; Geoffrey B Smith; Gary A Eiceman
Journal:  Anal Chem       Date:  2004-09-01       Impact factor: 6.986

10.  Forensic application of gas chromatography-differential mobility spectrometry with two-way classification of ignitable liquids from fire debris.

Authors:  Yao Lu; Peter B Harrington
Journal:  Anal Chem       Date:  2007-08-08       Impact factor: 6.986

View more
  7 in total

1.  Automated Algorithm for Detection of Transient Adenosine Release.

Authors:  Ryan P Borman; Ying Wang; Michael D Nguyen; Mallikarjunarao Ganesana; Scott T Lee; B Jill Venton
Journal:  ACS Chem Neurosci       Date:  2016-12-08       Impact factor: 4.418

2.  Quantitative detection of trace explosive vapors by programmed temperature desorption gas chromatography-electron capture detector.

Authors:  Christopher R Field; Adam Lubrano; Morgan Woytowitz; Braden C Giordano; Susan L Rose-Pehrsson
Journal:  J Vis Exp       Date:  2014-07-25       Impact factor: 1.355

3.  Supervised Semi-Automated Data Analysis Software for Gas Chromatography / Differential Mobility Spectrometry (GC/DMS) Metabolomics Applications.

Authors:  Daniel J Peirano; Alberto Pasamontes; Cristina E Davis
Journal:  Int J Ion Mobil Spectrom       Date:  2016-05-20

4.  Automated chemical identification and library building using dispersion plots for differential mobility spectrometry.

Authors:  Maneeshin Y Rajapakse; Eva Borras; Danny Yeap; Daniel J Peirano; Nicholas J Kenyon; Cristina E Davis
Journal:  Anal Methods       Date:  2018-08-14       Impact factor: 2.896

5.  Synchronized Analysis of FTIR Spectra and GCMS Chromatograms for Evaluation of the Thermally Degraded Vegetable Oils.

Authors:  Siong Fong Sim; Terri Zhuan Ean Lee; Nurul Aida Lu Mohd Irwan Lu; Benedict Samling
Journal:  J Anal Methods Chem       Date:  2014-01-19       Impact factor: 2.193

6.  A modular computational framework for automated peak extraction from ion mobility spectra.

Authors:  Marianna D'Addario; Dominik Kopczynski; Jörg Ingo Baumbach; Sven Rahmann
Journal:  BMC Bioinformatics       Date:  2014-01-22       Impact factor: 3.169

7.  Peak detection method evaluation for ion mobility spectrometry by using machine learning approaches.

Authors:  Anne-Christin Hauschild; Dominik Kopczynski; Marianna D'Addario; Jörg Ingo Baumbach; Sven Rahmann; Jan Baumbach
Journal:  Metabolites       Date:  2013-04-16
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.