Literature DB >> 19576384

Two-dimensional wavelet analysis based classification of gas chromatogram differential mobility spectrometry signals.

Weixiang Zhao1, Shankar Sankaran, Ana M Ibáñez, Abhaya M Dandekar, Cristina E Davis.   

Abstract

This study introduces two-dimensional (2-D) wavelet analysis to the classification of gas chromatogram differential mobility spectrometry (GC/DMS) data which are composed of retention time, compensation voltage, and corresponding intensities. One reported method to process such large data sets is to convert 2-D signals to 1-D signals by summing intensities either across retention time or compensation voltage, but it can lose important signal information in one data dimension. A 2-D wavelet analysis approach keeps the 2-D structure of original signals, while significantly reducing data size. We applied this feature extraction method to 2-D GC/DMS signals measured from control and disordered fruit and then employed two typical classification algorithms to testify the effects of the resultant features on chemical pattern recognition. Yielding a 93.3% accuracy of separating data from control and disordered fruit samples, 2-D wavelet analysis not only proves its feasibility to extract feature from original 2-D signals but also shows its superiority over the conventional feature extraction methods including converting 2-D to 1-D and selecting distinguishable pixels from training set. Furthermore, this process does not require coupling with specific pattern recognition methods, which may help ensure wide applications of this method to 2-D spectrometry data.

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Year:  2009        PMID: 19576384     DOI: 10.1016/j.aca.2009.05.029

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  5 in total

1.  Portable combination of Fourier transform infrared spectroscopy and differential mobility spectrometry for advanced vapor phase analysis.

Authors:  L Tamina Hagemann; Mitchell M McCartney; Alexander G Fung; Daniel J Peirano; Cristina E Davis; Boris Mizaikoff
Journal:  Analyst       Date:  2018-11-19       Impact factor: 4.616

2.  Supervised Semi-Automated Data Analysis Software for Gas Chromatography / Differential Mobility Spectrometry (GC/DMS) Metabolomics Applications.

Authors:  Daniel J Peirano; Alberto Pasamontes; Cristina E Davis
Journal:  Int J Ion Mobil Spectrom       Date:  2016-05-20

3.  Swarm intelligence based wavelet coefficient feature selection for mass spectral classification: an application to proteomics data.

Authors:  Weixiang Zhao; Cristina E Davis
Journal:  Anal Chim Acta       Date:  2009-08-15       Impact factor: 6.558

4.  The Highs and Lows of FAIMS: Predictions and Future Trends for High Field Asymmetric Waveform Ion Mobility Spectrometry.

Authors:  Yuriy Zrodnikov; Cristina E Davis
Journal:  J Nanomed Nanotechnol       Date:  2012-05-19

5.  Automated peak detection and matching algorithm for gas chromatography-differential mobility spectrometry.

Authors:  Sim S Fong; Preshious Rearden; Chitra Kanchagar; Christopher Sassetti; Jose Trevejo; Richard G Brereton
Journal:  Anal Chem       Date:  2011-01-04       Impact factor: 6.986

  5 in total

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