| Literature DB >> 21202966 |
Kong Wai Tan, Chew Hee Ng, Mohd Jamil Maah, Seik Weng Ng.
Abstract
The planar mol-ecules of the title compound, C(9)H(11)N(3)O(2)S, are linked into a supra-molecualr chain via O-H⋯S hydrogen bonds. These chains are connected into a two-dimensional array via N-H⋯O hydrogen bonds; an intra-molecular O-H⋯N hydrogen bond is also present.Entities:
Year: 2008 PMID: 21202966 PMCID: PMC2961871 DOI: 10.1107/S1600536808018801
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11N3O2S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 558 reflections | |
| θ = 2.9–23.0º | |
| µ = 0.31 mm−1 | |
| α = 78.552 (4)º | |
| β = 74.181 (4)º | Plate, yellow |
| γ = 81.743 (4)º | 0.24 × 0.16 × 0.02 mm |
| Bruker SMART APEX diffractometer | 2258 independent reflections |
| Radiation source: fine-focus sealed tube | 1580 reflections with |
| Monochromator: graphite | |
| θmax = 27.5º | |
| ω scans | θmin = 2.5º |
| Absorption correction: Multi-scan(SADABS; Sheldrick, 1996) | |
| 4189 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 2258 reflections | Δρmax = 0.32 e Å−3 |
| 153 parameters | Δρmin = −0.47 e Å−3 |
| 4 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| S1 | 0.44298 (12) | 0.47335 (9) | 0.72966 (7) | 0.0189 (2) | |
| O1 | 1.3132 (3) | 0.8655 (2) | 0.47568 (18) | 0.0188 (4) | |
| O2 | 1.2446 (3) | 1.1893 (2) | −0.03406 (18) | 0.0200 (5) | |
| N1 | 0.8637 (4) | 0.5405 (3) | 0.7312 (2) | 0.0147 (5) | |
| N2 | 0.7415 (4) | 0.6387 (3) | 0.5359 (2) | 0.0159 (5) | |
| N3 | 0.9289 (4) | 0.7298 (3) | 0.4833 (2) | 0.0145 (5) | |
| C1 | 0.8391 (5) | 0.4576 (3) | 0.8709 (2) | 0.0188 (6) | |
| H1A | 0.9802 | 0.4633 | 0.8996 | 0.028* | |
| H1B | 0.8160 | 0.3447 | 0.8763 | 0.028* | |
| H1C | 0.7044 | 0.5088 | 0.9310 | 0.028* | |
| C2 | 0.7001 (4) | 0.5552 (3) | 0.6642 (2) | 0.0134 (6) | |
| C3 | 0.9368 (4) | 0.8121 (3) | 0.3637 (2) | 0.0136 (6) | |
| H3 | 0.8213 | 0.8018 | 0.3194 | 0.016* | |
| C4 | 1.1147 (4) | 0.9200 (3) | 0.2937 (2) | 0.0133 (6) | |
| C5 | 1.2915 (4) | 0.9450 (3) | 0.3503 (2) | 0.0140 (6) | |
| C6 | 1.4505 (5) | 1.0551 (3) | 0.2796 (2) | 0.0157 (6) | |
| H6 | 1.5673 | 1.0745 | 0.3193 | 0.019* | |
| C7 | 1.4389 (5) | 1.1372 (3) | 0.1504 (3) | 0.0153 (6) | |
| H7 | 1.5496 | 1.2111 | 0.1016 | 0.018* | |
| C8 | 1.2669 (4) | 1.1117 (3) | 0.0929 (2) | 0.0149 (6) | |
| C9 | 1.1055 (4) | 1.0049 (3) | 0.1638 (2) | 0.0146 (6) | |
| H9 | 0.9866 | 0.9887 | 0.1243 | 0.018* | |
| H1o | 1.206 (4) | 0.805 (3) | 0.511 (3) | 0.048 (12)* | |
| H2o | 1.352 (5) | 1.245 (4) | −0.082 (3) | 0.059 (13)* | |
| H1n | 0.988 (3) | 0.581 (4) | 0.689 (3) | 0.032 (9)* | |
| H2n | 0.640 (4) | 0.656 (4) | 0.491 (3) | 0.042 (10)* |
| S1 | 0.0149 (4) | 0.0241 (4) | 0.0175 (3) | −0.0083 (3) | −0.0051 (3) | 0.0033 (3) |
| O1 | 0.0222 (11) | 0.0221 (12) | 0.0140 (9) | −0.0081 (9) | −0.0089 (8) | 0.0025 (8) |
| O2 | 0.0244 (11) | 0.0202 (12) | 0.0149 (9) | −0.0088 (9) | −0.0059 (8) | 0.0047 (8) |
| N1 | 0.0114 (12) | 0.0181 (13) | 0.0148 (11) | −0.0035 (10) | −0.0038 (9) | −0.0007 (9) |
| N2 | 0.0153 (12) | 0.0168 (13) | 0.0158 (11) | −0.0060 (10) | −0.0056 (9) | 0.0024 (9) |
| N3 | 0.0121 (11) | 0.0136 (12) | 0.0175 (11) | −0.0050 (9) | −0.0013 (9) | −0.0023 (9) |
| C1 | 0.0198 (15) | 0.0231 (16) | 0.0128 (12) | −0.0048 (12) | −0.0051 (11) | 0.0015 (11) |
| C2 | 0.0137 (13) | 0.0106 (14) | 0.0155 (12) | −0.0011 (11) | −0.0032 (10) | −0.0022 (11) |
| C3 | 0.0136 (13) | 0.0138 (14) | 0.0147 (12) | −0.0019 (11) | −0.0053 (10) | −0.0025 (11) |
| C4 | 0.0134 (13) | 0.0118 (14) | 0.0153 (12) | −0.0008 (10) | −0.0034 (10) | −0.0038 (11) |
| C5 | 0.0137 (13) | 0.0154 (15) | 0.0133 (12) | 0.0001 (11) | −0.0041 (10) | −0.0034 (11) |
| C6 | 0.0139 (13) | 0.0162 (15) | 0.0193 (13) | −0.0029 (11) | −0.0070 (10) | −0.0039 (11) |
| C7 | 0.0163 (14) | 0.0102 (14) | 0.0178 (13) | −0.0021 (11) | −0.0024 (10) | −0.0006 (11) |
| C8 | 0.0160 (14) | 0.0144 (15) | 0.0143 (12) | 0.0006 (11) | −0.0050 (10) | −0.0023 (11) |
| C9 | 0.0158 (14) | 0.0156 (15) | 0.0140 (12) | −0.0021 (11) | −0.0059 (10) | −0.0031 (11) |
| S1—C2 | 1.695 (3) | C1—H1B | 0.9800 |
| O1—C5 | 1.367 (3) | C1—H1C | 0.9800 |
| O1—H1o | 0.84 (3) | C3—C4 | 1.450 (4) |
| O2—C8 | 1.379 (3) | C3—H3 | 0.9500 |
| O2—H2o | 0.84 (3) | C4—C5 | 1.401 (4) |
| N1—C2 | 1.325 (3) | C4—C9 | 1.403 (3) |
| N1—C1 | 1.453 (3) | C5—C6 | 1.388 (4) |
| N1—H1n | 0.84 (3) | C6—C7 | 1.393 (3) |
| N2—C2 | 1.349 (3) | C6—H6 | 0.9500 |
| N2—N3 | 1.382 (3) | C7—C8 | 1.383 (4) |
| N2—H2n | 0.84 (3) | C7—H7 | 0.9500 |
| N3—C3 | 1.286 (3) | C8—C9 | 1.379 (4) |
| C1—H1A | 0.9800 | C9—H9 | 0.9500 |
| C5—O1—H1O | 110 (2) | C4—C3—H3 | 118.6 |
| C8—O2—H2O | 117 (3) | C5—C4—C9 | 118.9 (2) |
| C2—N1—C1 | 123.8 (2) | C5—C4—C3 | 123.2 (2) |
| C2—N1—H1N | 117 (2) | C9—C4—C3 | 117.9 (2) |
| C1—N1—H1N | 119 (2) | O1—C5—C6 | 117.7 (2) |
| C2—N2—N3 | 121.3 (2) | O1—C5—C4 | 122.3 (2) |
| C2—N2—H2N | 122 (2) | C6—C5—C4 | 120.0 (2) |
| N3—N2—H2N | 116 (2) | C5—C6—C7 | 120.1 (3) |
| C3—N3—N2 | 114.5 (2) | C5—C6—H6 | 120.0 |
| N1—C1—H1A | 109.5 | C7—C6—H6 | 120.0 |
| N1—C1—H1B | 109.5 | C8—C7—C6 | 120.3 (2) |
| H1A—C1—H1B | 109.5 | C8—C7—H7 | 119.9 |
| N1—C1—H1C | 109.5 | C6—C7—H7 | 119.9 |
| H1A—C1—H1C | 109.5 | O2—C8—C9 | 116.7 (2) |
| H1B—C1—H1C | 109.5 | O2—C8—C7 | 123.3 (2) |
| N1—C2—N2 | 118.2 (2) | C9—C8—C7 | 119.9 (2) |
| N1—C2—S1 | 123.80 (19) | C8—C9—C4 | 120.8 (2) |
| N2—C2—S1 | 118.0 (2) | C8—C9—H9 | 119.6 |
| N3—C3—C4 | 122.7 (2) | C4—C9—H9 | 119.6 |
| N3—C3—H3 | 118.6 | ||
| C2—N2—N3—C3 | −175.1 (2) | C3—C4—C5—C6 | −177.4 (2) |
| C1—N1—C2—N2 | 178.3 (2) | O1—C5—C6—C7 | 178.8 (2) |
| C1—N1—C2—S1 | −2.5 (4) | C4—C5—C6—C7 | −2.0 (4) |
| N3—N2—C2—N1 | −11.0 (4) | C5—C6—C7—C8 | 1.1 (4) |
| N3—N2—C2—S1 | 169.69 (19) | C6—C7—C8—O2 | 179.7 (2) |
| N2—N3—C3—C4 | 177.5 (2) | C6—C7—C8—C9 | 0.2 (4) |
| N3—C3—C4—C5 | −0.6 (4) | O2—C8—C9—C4 | 179.8 (2) |
| N3—C3—C4—C9 | −179.5 (2) | C7—C8—C9—C4 | −0.7 (4) |
| C9—C4—C5—O1 | −179.3 (2) | C5—C4—C9—C8 | −0.2 (4) |
| C3—C4—C5—O1 | 1.8 (4) | C3—C4—C9—C8 | 178.8 (2) |
| C9—C4—C5—C6 | 1.5 (4) |
| H··· | ||||
| O1—H1o···N3 | 0.84 (3) | 1.97 (2) | 2.698 (3) | 144 (3) |
| O2—H2o···S1i | 0.84 (3) | 2.46 (2) | 3.182 (2) | 144 (3) |
| N2—H2n···O1ii | 0.84 (3) | 2.47 (3) | 3.111 (3) | 134 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.84 (3) | 1.97 (2) | 2.698 (3) | 144 (3) |
| O2—H2 | 0.84 (3) | 2.46 (2) | 3.182 (2) | 144 (3) |
| N2—H2 | 0.84 (3) | 2.47 (3) | 3.111 (3) | 134 (3) |
Symmetry codes: (i) ; (ii) .