| Literature DB >> 21202962 |
Jian-Feng Liu, Xiao-Lan Liu, Yong-Hong Liu.
Abstract
Mol-ecules of the title compound, C(18)H(16)N(2)S(2), exist as the (2E, 1'Z)-isomer. The 1,3-dithiol-ane ring has an envelope conformation; the atoms of the C-C bond are disordered over two positions with occupancies of 0.47 (7) and 0.53 (7). The structure exhibits inter-molecular C-H⋯S and C-H⋯π(arene) hydrogen bonds.Entities:
Year: 2008 PMID: 21202962 PMCID: PMC2961686 DOI: 10.1107/S1600536808018606
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H16N2S2 | |
| Melting point: 442 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 2883 reflections |
| θ = 2.6–28.1° | |
| µ = 0.33 mm−1 | |
| Block, yellow | |
| 0.30 × 0.30 × 0.20 mm | |
| Bruker SMART 1000 CCD diffractometer | 3339 independent reflections |
| Radiation source: fine-focus sealed tube | 2833 reflections with |
| graphite | |
| ω scans | θmax = 28.4°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 7320 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.003 | |
| 3339 reflections | Δρmax = 0.47 e Å−3 |
| 206 parameters | Δρmin = −0.34 e Å−3 |
| 7 restraints | Absolute structure: Flack (1983), 1186 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.03 (9) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.00882 (11) | 1.1023 (6) | 0.9703 (5) | 0.0507 (8) | |
| H1 | −0.0016 | 1.0304 | 0.8863 | 0.061* | |
| C2 | −0.01559 (12) | 1.2737 (7) | 1.0391 (5) | 0.0569 (10) | |
| H2 | −0.0428 | 1.3112 | 1.0024 | 0.068* | |
| C3 | −0.00045 (12) | 1.3879 (6) | 1.1592 (4) | 0.0526 (9) | |
| H3 | −0.0168 | 1.5053 | 1.2025 | 0.063* | |
| C4 | 0.03941 (11) | 1.3275 (7) | 1.2162 (5) | 0.0547 (9) | |
| H4 | 0.0500 | 1.4039 | 1.2985 | 0.066* | |
| C5 | 0.06363 (10) | 1.1535 (6) | 1.1509 (4) | 0.0423 (7) | |
| H5 | 0.0903 | 1.1133 | 1.1908 | 0.051* | |
| C6 | 0.04918 (9) | 1.0381 (5) | 1.0281 (3) | 0.0321 (6) | |
| C7 | 0.07453 (9) | 0.8558 (5) | 0.9542 (3) | 0.0318 (6) | |
| H7 | 0.0679 | 0.8263 | 0.8568 | 0.038* | |
| C8 | 0.10609 (9) | 0.7288 (5) | 1.0139 (3) | 0.0302 (6) | |
| H8 | 0.1126 | 0.7561 | 1.1117 | 0.036* | |
| C9 | 0.13112 (8) | 0.5516 (5) | 0.9387 (3) | 0.0288 (6) | |
| C10 | 0.13030 (9) | 0.5395 (5) | 0.7762 (3) | 0.0287 (6) | |
| C11 | 0.11505 (11) | 0.3437 (6) | 0.7030 (4) | 0.0400 (7) | |
| H11 | 0.1039 | 0.2189 | 0.7559 | 0.048* | |
| C12 | 0.11627 (13) | 0.3328 (7) | 0.5522 (4) | 0.0485 (9) | |
| H12 | 0.1059 | 0.2011 | 0.5044 | 0.058* | |
| C13 | 0.13278 (10) | 0.5157 (6) | 0.4720 (4) | 0.0457 (8) | |
| H13 | 0.1341 | 0.5062 | 0.3706 | 0.055* | |
| C14 | 0.14728 (10) | 0.7122 (6) | 0.5424 (4) | 0.0424 (8) | |
| H14 | 0.1581 | 0.8365 | 0.4883 | 0.051* | |
| C15 | 0.14592 (9) | 0.7269 (6) | 0.6941 (3) | 0.0352 (7) | |
| H15 | 0.1554 | 0.8615 | 0.7408 | 0.042* | |
| C16 | 0.19817 (8) | 0.1107 (5) | 1.0334 (3) | 0.0267 (6) | |
| C17 | 0.2416 (6) | −0.261 (2) | 1.1233 (8) | 0.061 (3) | 0.427 (7) |
| H17C | 0.2319 | −0.4193 | 1.1064 | 0.073* | 0.427 (7) |
| H17D | 0.2724 | −0.2661 | 1.1438 | 0.073* | 0.427 (7) |
| C18 | 0.2200 (3) | −0.1717 (16) | 1.2466 (9) | 0.0409 (13) | 0.427 (7) |
| H18C | 0.2410 | −0.1558 | 1.3248 | 0.049* | 0.427 (7) |
| H18D | 0.1989 | −0.2864 | 1.2778 | 0.049* | 0.427 (7) |
| C17' | 0.2517 (3) | −0.1970 (15) | 1.1350 (5) | 0.061 (3) | 0.573 (7) |
| H17A | 0.2432 | −0.3591 | 1.1449 | 0.073* | 0.573 (7) |
| H17B | 0.2830 | −0.1927 | 1.1340 | 0.073* | 0.573 (7) |
| C18' | 0.2375 (2) | −0.0777 (12) | 1.2611 (6) | 0.0409 (13) | 0.573 (7) |
| H18A | 0.2612 | 0.0151 | 1.2993 | 0.049* | 0.573 (7) |
| H18B | 0.2295 | −0.1906 | 1.3353 | 0.049* | 0.573 (7) |
| N1 | 0.15384 (7) | 0.4150 (4) | 1.0215 (3) | 0.0303 (5) | |
| N2 | 0.17893 (8) | 0.2525 (4) | 0.9464 (3) | 0.0326 (5) | |
| S1 | 0.23331 (2) | −0.09801 (13) | 0.96398 (8) | 0.0371 (2) | |
| S2 | 0.19208 (2) | 0.10941 (13) | 1.22517 (8) | 0.03412 (18) |
| C1 | 0.0449 (17) | 0.054 (2) | 0.0529 (19) | 0.0162 (16) | −0.0127 (17) | −0.0014 (18) |
| C2 | 0.0450 (18) | 0.064 (3) | 0.062 (2) | 0.025 (2) | −0.0003 (18) | 0.011 (2) |
| C3 | 0.0468 (19) | 0.048 (2) | 0.063 (2) | 0.0138 (16) | 0.0177 (17) | 0.0037 (17) |
| C4 | 0.0448 (17) | 0.057 (2) | 0.062 (2) | 0.0032 (17) | 0.0105 (19) | −0.014 (2) |
| C5 | 0.0282 (14) | 0.0498 (19) | 0.0489 (19) | 0.0002 (14) | 0.0035 (13) | −0.0052 (15) |
| C6 | 0.0304 (13) | 0.0307 (15) | 0.0353 (14) | 0.0037 (12) | 0.0044 (11) | 0.0105 (12) |
| C7 | 0.0307 (13) | 0.0326 (14) | 0.0321 (13) | −0.0017 (12) | −0.0014 (12) | 0.0042 (13) |
| C8 | 0.0300 (12) | 0.0319 (15) | 0.0287 (13) | 0.0000 (12) | 0.0000 (10) | 0.0062 (11) |
| C9 | 0.0245 (12) | 0.0292 (14) | 0.0326 (14) | −0.0031 (11) | 0.0000 (10) | 0.0083 (11) |
| C10 | 0.0256 (12) | 0.0277 (14) | 0.0328 (13) | 0.0085 (11) | 0.0001 (11) | 0.0060 (11) |
| C11 | 0.0465 (16) | 0.0330 (16) | 0.0405 (18) | 0.0057 (14) | −0.0028 (14) | 0.0068 (14) |
| C12 | 0.061 (2) | 0.0419 (19) | 0.0426 (18) | 0.0144 (18) | −0.0111 (16) | −0.0071 (15) |
| C13 | 0.0507 (18) | 0.056 (2) | 0.0300 (14) | 0.0256 (17) | 0.0009 (16) | 0.0032 (16) |
| C14 | 0.0417 (16) | 0.050 (2) | 0.0358 (16) | 0.0093 (16) | 0.0069 (14) | 0.0178 (15) |
| C15 | 0.0303 (13) | 0.0381 (17) | 0.0373 (16) | 0.0033 (13) | 0.0026 (11) | 0.0097 (13) |
| C16 | 0.0260 (12) | 0.0276 (15) | 0.0266 (12) | −0.0049 (11) | −0.0006 (10) | 0.0055 (11) |
| C17 | 0.087 (6) | 0.050 (6) | 0.046 (2) | 0.039 (5) | −0.018 (3) | −0.001 (3) |
| C18 | 0.038 (3) | 0.039 (4) | 0.046 (3) | 0.009 (2) | −0.016 (2) | 0.008 (3) |
| C17' | 0.087 (6) | 0.050 (6) | 0.046 (2) | 0.039 (5) | −0.018 (3) | −0.001 (3) |
| C18' | 0.038 (3) | 0.039 (4) | 0.046 (3) | 0.009 (2) | −0.016 (2) | 0.008 (3) |
| N1 | 0.0260 (11) | 0.0347 (13) | 0.0302 (11) | 0.0046 (10) | 0.0023 (9) | 0.0081 (10) |
| N2 | 0.0315 (11) | 0.0357 (13) | 0.0306 (12) | 0.0058 (10) | 0.0038 (9) | 0.0078 (10) |
| S1 | 0.0372 (4) | 0.0369 (4) | 0.0373 (4) | 0.0088 (3) | 0.0046 (3) | 0.0062 (4) |
| S2 | 0.0336 (3) | 0.0405 (4) | 0.0283 (3) | 0.0076 (3) | −0.0037 (3) | 0.0034 (3) |
| C1—C2 | 1.389 (5) | C13—C14 | 1.373 (5) |
| C1—C6 | 1.404 (4) | C13—H13 | 0.9300 |
| C1—H1 | 0.9300 | C14—C15 | 1.391 (4) |
| C2—C3 | 1.362 (6) | C14—H14 | 0.9300 |
| C2—H2 | 0.9300 | C15—H15 | 0.9300 |
| C3—C4 | 1.381 (5) | C16—N2 | 1.284 (3) |
| C3—H3 | 0.9300 | C16—S1 | 1.736 (3) |
| C4—C5 | 1.383 (5) | C16—S2 | 1.765 (3) |
| C4—H4 | 0.9300 | C17—C18 | 1.406 (5) |
| C5—C6 | 1.378 (4) | C17—S1 | 1.750 (5) |
| C5—H5 | 0.9300 | C17—H17C | 0.9700 |
| C6—C7 | 1.471 (4) | C17—H17D | 0.9700 |
| C7—C8 | 1.334 (4) | C18—S2 | 1.839 (8) |
| C7—H7 | 0.9300 | C18—H18C | 0.9700 |
| C8—C9 | 1.451 (4) | C18—H18D | 0.9700 |
| C8—H8 | 0.9300 | C17'—C18' | 1.410 (5) |
| C9—N1 | 1.296 (3) | C17'—S1 | 1.759 (4) |
| C9—C10 | 1.489 (4) | C17'—H17A | 0.9700 |
| C10—C11 | 1.390 (5) | C17'—H17B | 0.9700 |
| C10—C15 | 1.397 (4) | C18'—S2 | 1.798 (5) |
| C11—C12 | 1.382 (5) | C18'—H18A | 0.9700 |
| C11—H11 | 0.9300 | C18'—H18B | 0.9700 |
| C12—C13 | 1.378 (5) | N1—N2 | 1.394 (3) |
| C12—H12 | 0.9300 | ||
| C2—C1—C6 | 119.8 (4) | C13—C14—C15 | 120.5 (3) |
| C2—C1—H1 | 120.1 | C13—C14—H14 | 119.7 |
| C6—C1—H1 | 120.1 | C15—C14—H14 | 119.7 |
| C3—C2—C1 | 121.3 (3) | C14—C15—C10 | 120.0 (3) |
| C3—C2—H2 | 119.4 | C14—C15—H15 | 120.0 |
| C1—C2—H2 | 119.4 | C10—C15—H15 | 120.0 |
| C2—C3—C4 | 119.3 (3) | N2—C16—S1 | 120.0 (2) |
| C2—C3—H3 | 120.3 | N2—C16—S2 | 124.7 (2) |
| C4—C3—H3 | 120.3 | S1—C16—S2 | 115.30 (15) |
| C3—C4—C5 | 120.0 (4) | C18—C17—S1 | 113.9 (6) |
| C3—C4—H4 | 120.0 | C18—C17—H17C | 108.8 |
| C5—C4—H4 | 120.0 | S1—C17—H17C | 108.8 |
| C6—C5—C4 | 121.5 (3) | C18—C17—H17D | 108.8 |
| C6—C5—H5 | 119.2 | S1—C17—H17D | 108.8 |
| C4—C5—H5 | 119.2 | H17C—C17—H17D | 107.7 |
| C5—C6—C1 | 118.0 (3) | C17—C18—S2 | 117.1 (6) |
| C5—C6—C7 | 122.9 (3) | C17—C18—H18C | 108.0 |
| C1—C6—C7 | 119.1 (3) | S2—C18—H18C | 108.0 |
| C8—C7—C6 | 126.1 (3) | C17—C18—H18D | 108.0 |
| C8—C7—H7 | 117.0 | S2—C18—H18D | 108.0 |
| C6—C7—H7 | 117.0 | H18C—C18—H18D | 107.3 |
| C7—C8—C9 | 125.3 (3) | C18'—C17'—S1 | 118.1 (5) |
| C7—C8—H8 | 117.3 | C18'—C17'—H17A | 107.8 |
| C9—C8—H8 | 117.3 | S1—C17'—H17A | 107.8 |
| N1—C9—C8 | 115.8 (2) | C18'—C17'—H17B | 107.8 |
| N1—C9—C10 | 124.4 (3) | S1—C17'—H17B | 107.8 |
| C8—C9—C10 | 119.8 (2) | H17A—C17'—H17B | 107.1 |
| C11—C10—C15 | 118.6 (3) | C17'—C18'—S2 | 112.4 (5) |
| C11—C10—C9 | 121.7 (3) | C17'—C18'—H18A | 109.1 |
| C15—C10—C9 | 119.7 (3) | S2—C18'—H18A | 109.1 |
| C12—C11—C10 | 120.6 (4) | C17'—C18'—H18B | 109.1 |
| C12—C11—H11 | 119.7 | S2—C18'—H18B | 109.1 |
| C10—C11—H11 | 119.7 | H18A—C18'—H18B | 107.8 |
| C13—C12—C11 | 120.5 (4) | C9—N1—N2 | 114.7 (2) |
| C13—C12—H12 | 119.8 | C16—N2—N1 | 112.1 (2) |
| C11—C12—H12 | 119.8 | C16—S1—C17 | 98.9 (3) |
| C14—C13—C12 | 119.7 (3) | C16—S1—C17' | 95.7 (3) |
| C14—C13—H13 | 120.1 | C16—S2—C18' | 95.8 (2) |
| C12—C13—H13 | 120.1 | C16—S2—C18 | 93.4 (3) |
| H··· | ||||
| C17'—H17B···Cgi | 0.97 | 2.94 | 3.842 (9) | 156 |
| C18'—H18A···S1ii | 0.97 | 2.69 | 3.439 (6) | 135 |
| C18'—H18B···S1i | 0.97 | 2.86 | 3.628 (7) | 137 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C17′—H17 | 0.97 | 2.94 | 3.842 (9) | 156 |
| C18′—H18 | 0.97 | 2.69 | 3.439 (6) | 135 |
| C18′—H18 | 0.97 | 2.86 | 3.628 (7) | 137 |
Symmetry codes: (i) ; (ii) . Cg is the centroid of atoms C10–C15.