Literature DB >> 21202641

2,2'-(Biphenyl-2,2'-diyldi-oxy)diaceto-hydrazide.

Farooq Ibad, Asra Mustafa, Muhammad Raza Shah, Donald Vanderveer.   

Abstract

In the mol-ecule of the title compound, C(16)H(18)N(4)O(4), the dihedral angle between the mean planes of the two benzene rings is 56.76 (5)°. The crystal structure reveals extensive inter-molecular hydrogen bonds between carbonyl O atoms and primary amines, as well as between primary and secondary amines of hydrazide, forming rings of R(2) (2)(10) and R(2) (2)(6) motifs, respectively. The structure is further stabilized by intra-molecular and non-classical hydrogen bonds of the types N-H⋯O and C-H⋯O, respectively. The structure does not show any π-π inter-actions.

Entities:  

Year:  2008        PMID: 21202641      PMCID: PMC2961455          DOI: 10.1107/S1600536808014864

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature see: Dekeyser et al. (2003 ▶); Ali et al. (2008 ▶); Baudry et al. (2006 ▶); Bhat et al. (1974 ▶); Etter (1990 ▶); Kakefuda et al. (2002 ▶); Litvinchuk et al. (2004 ▶); Priebe et al. (2008 ▶); Sisson et al. (2006 ▶); Thaker & Patel (2008 ▶); Yan et al. (1993 ▶).

Experimental

Crystal data

C16H18N4O4 M = 330.34 Triclinic, a = 8.4041 (17) Å b = 9.7148 (19) Å c = 10.465 (2) Å α = 99.27 (3)° β = 92.50 (3)° γ = 113.85 (3)° V = 765.7 (3) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 153 (2) K 0.31 × 0.29 × 0.22 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.968, T max = 0.977 5673 measured reflections 2695 independent reflections 2440 reflections with I > 2σ(I) R int = 0.009

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.092 S = 1.05 2695 reflections 237 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2006 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL (Sheldrick, 2008 ▶); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808014864/pv2081sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014864/pv2081Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H18N4O4Z = 2
Mr = 330.34F000 = 348
Triclinic, P1Dx = 1.433 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.4041 (17) ÅCell parameters from 2518 reflections
b = 9.7148 (19) Åθ = 2.7–26.4º
c = 10.465 (2) ŵ = 0.11 mm1
α = 99.27 (3)ºT = 153 (2) K
β = 92.50 (3)ºChip, colorless
γ = 113.85 (3)º0.31 × 0.29 × 0.22 mm
V = 765.7 (3) Å3
Rigaku Mercury CCD diffractometer2695 independent reflections
Radiation source: Sealed Tube2440 reflections with I > 2σ(I)
Monochromator: Graphite MonochromatorRint = 0.009
Detector resolution: 14.6306 pixels mm-1θmax = 25.2º
T = 153(2) Kθmin = 2.0º
ω scansh = −10→9
Absorption correction: multi-scan(REQAB; Jacobson, 1998)k = −10→11
Tmin = 0.968, Tmax = 0.977l = −12→12
5673 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.092  w = 1/[σ2(Fo2) + (0.0447P)2 + 0.3477P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2695 reflectionsΔρmax = 0.20 e Å3
237 parametersΔρmin = −0.20 e Å3
6 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.32268 (15)−0.23766 (13)−0.20890 (9)0.0317 (3)
O20.26996 (14)−0.02884 (11)0.08294 (9)0.0263 (2)
O30.33765 (13)0.10884 (10)0.50896 (8)0.0242 (2)
O40.41183 (15)0.35080 (12)0.81794 (9)0.0313 (3)
N10.28627 (18)−0.42946 (14)−0.03033 (12)0.0282 (3)
H1A0.389 (2)−0.419 (2)0.0137 (16)0.034*
H1B0.293 (2)−0.452 (2)−0.1191 (14)0.034*
N20.28707 (16)−0.28115 (14)−0.00437 (11)0.0253 (3)
H20.253 (2)−0.254 (2)0.0732 (15)0.035 (5)*
N30.41999 (16)0.39435 (13)0.61151 (11)0.0236 (3)
H30.428 (2)0.362 (2)0.5272 (14)0.038 (5)*
N40.46353 (18)0.55390 (14)0.64554 (12)0.0271 (3)
H4A0.544 (2)0.5916 (19)0.7182 (15)0.032*
H4B0.364 (2)0.565 (2)0.6732 (16)0.032*
C10.29940 (17)−0.19832 (16)−0.09628 (12)0.0216 (3)
C20.28191 (18)−0.04884 (16)−0.05358 (12)0.0217 (3)
H2B0.38510.0379−0.07260.026*
H2C0.1756−0.0523−0.10130.026*
C30.21044 (17)0.07599 (15)0.14010 (12)0.0196 (3)
C40.20643 (18)0.19491 (15)0.08338 (13)0.0224 (3)
H4C0.24370.2059−0.00020.027*
C50.14735 (18)0.29724 (16)0.15019 (14)0.0253 (3)
H5A0.14300.37790.11160.030*
C60.09474 (18)0.28244 (15)0.27275 (14)0.0246 (3)
H6A0.05440.35270.31810.029*
C70.10118 (17)0.16440 (15)0.32919 (13)0.0212 (3)
H7A0.06640.15570.41370.025*
C80.15766 (16)0.05875 (14)0.26424 (12)0.0187 (3)
C90.15926 (17)−0.07024 (15)0.32413 (12)0.0187 (3)
C100.25033 (17)−0.04279 (15)0.44785 (12)0.0189 (3)
C110.25260 (18)−0.16331 (16)0.50320 (13)0.0229 (3)
H11A0.3164−0.14310.58640.028*
C120.1608 (2)−0.31304 (16)0.43565 (14)0.0261 (3)
H12A0.1631−0.39560.47240.031*
C130.0658 (2)−0.34330 (16)0.31497 (14)0.0271 (3)
H13A0.0014−0.44620.27000.033*
C140.06546 (18)−0.22235 (15)0.26023 (13)0.0229 (3)
H14A0.0000−0.24360.17760.028*
C150.36921 (19)0.14095 (16)0.64783 (12)0.0242 (3)
H15A0.47200.12280.67570.029*
H15B0.26630.07170.68370.029*
C160.40281 (17)0.30626 (16)0.69949 (12)0.0218 (3)
U11U22U33U12U13U23
O10.0463 (7)0.0413 (6)0.0184 (5)0.0285 (5)0.0086 (4)0.0069 (4)
O20.0425 (6)0.0299 (5)0.0148 (5)0.0231 (5)0.0048 (4)0.0048 (4)
O30.0358 (6)0.0189 (5)0.0135 (4)0.0073 (4)0.0008 (4)0.0026 (4)
O40.0438 (6)0.0325 (6)0.0156 (5)0.0157 (5)0.0017 (4)0.0004 (4)
N10.0377 (7)0.0248 (6)0.0259 (6)0.0165 (6)0.0055 (5)0.0054 (5)
N20.0358 (7)0.0251 (6)0.0193 (6)0.0164 (5)0.0066 (5)0.0051 (5)
N30.0307 (6)0.0196 (6)0.0179 (6)0.0087 (5)0.0049 (5)0.0008 (4)
N40.0358 (7)0.0210 (6)0.0224 (6)0.0111 (5)0.0055 (5)0.0004 (5)
C10.0205 (6)0.0282 (7)0.0173 (6)0.0112 (6)0.0020 (5)0.0045 (5)
C20.0250 (7)0.0252 (7)0.0150 (6)0.0103 (6)0.0024 (5)0.0051 (5)
C30.0210 (6)0.0182 (6)0.0184 (6)0.0079 (5)−0.0007 (5)0.0016 (5)
C40.0239 (7)0.0216 (7)0.0204 (6)0.0071 (5)0.0010 (5)0.0075 (5)
C50.0266 (7)0.0184 (7)0.0311 (7)0.0081 (6)−0.0006 (6)0.0094 (6)
C60.0265 (7)0.0183 (7)0.0300 (7)0.0116 (6)0.0013 (6)0.0026 (5)
C70.0215 (7)0.0202 (7)0.0208 (6)0.0080 (5)0.0014 (5)0.0032 (5)
C80.0197 (6)0.0159 (6)0.0185 (6)0.0058 (5)−0.0006 (5)0.0029 (5)
C90.0217 (6)0.0187 (7)0.0179 (6)0.0101 (5)0.0051 (5)0.0044 (5)
C100.0222 (6)0.0173 (6)0.0169 (6)0.0080 (5)0.0051 (5)0.0025 (5)
C110.0281 (7)0.0259 (7)0.0183 (6)0.0138 (6)0.0036 (5)0.0071 (5)
C120.0351 (8)0.0219 (7)0.0271 (7)0.0154 (6)0.0063 (6)0.0102 (6)
C130.0337 (8)0.0175 (7)0.0289 (7)0.0102 (6)0.0016 (6)0.0030 (5)
C140.0279 (7)0.0207 (7)0.0200 (6)0.0105 (6)0.0003 (5)0.0028 (5)
C150.0325 (7)0.0252 (7)0.0134 (6)0.0104 (6)0.0021 (5)0.0041 (5)
C160.0204 (6)0.0251 (7)0.0176 (6)0.0080 (5)0.0017 (5)0.0019 (5)
O1—C11.2284 (17)C4—H4C0.9500
O2—C31.3736 (16)C5—C61.385 (2)
O2—C21.4242 (15)C5—H5A0.9500
O3—C101.3779 (17)C6—C71.3901 (19)
O3—C151.4259 (15)C6—H6A0.9500
O4—C161.2338 (16)C7—C81.3922 (19)
N1—N21.4198 (17)C7—H7A0.9500
N1—H1A0.925 (14)C8—C91.4931 (18)
N1—H1B0.930 (14)C9—C141.3949 (19)
N2—C11.3320 (18)C9—C101.4037 (19)
N2—H20.907 (14)C10—C111.3937 (19)
N3—C161.3291 (18)C11—C121.387 (2)
N3—N41.4196 (17)C11—H11A0.9500
N3—H30.904 (14)C12—C131.386 (2)
N4—H4A0.914 (14)C12—H12A0.9500
N4—H4B0.936 (14)C13—C141.3888 (19)
C1—C21.5164 (19)C13—H13A0.9500
C2—H2B0.9900C14—H14A0.9500
C2—H2C0.9900C15—C161.514 (2)
C3—C41.3924 (19)C15—H15A0.9900
C3—C81.4046 (18)C15—H15B0.9900
C4—C51.389 (2)
C3—O2—C2119.52 (10)C7—C6—H6A120.1
C10—O3—C15117.33 (10)C6—C7—C8121.29 (12)
N2—N1—H1A105.6 (11)C6—C7—H7A119.4
N2—N1—H1B106.5 (11)C8—C7—H7A119.4
H1A—N1—H1B107.7 (15)C7—C8—C3117.98 (12)
C1—N2—N1122.76 (12)C7—C8—C9120.86 (11)
C1—N2—H2119.5 (11)C3—C8—C9121.16 (12)
N1—N2—H2116.3 (11)C14—C9—C10117.93 (12)
C16—N3—N4123.00 (11)C14—C9—C8120.81 (11)
C16—N3—H3121.4 (12)C10—C9—C8121.23 (12)
N4—N3—H3114.3 (12)O3—C10—C11122.79 (11)
N3—N4—H4A106.8 (11)O3—C10—C9116.07 (11)
N3—N4—H4B107.6 (11)C11—C10—C9121.13 (12)
H4A—N4—H4B105.1 (15)C12—C11—C10119.35 (12)
O1—C1—N2123.62 (13)C12—C11—H11A120.3
O1—C1—C2120.88 (12)C10—C11—H11A120.3
N2—C1—C2115.50 (11)C13—C12—C11120.59 (13)
O2—C2—C1108.04 (11)C13—C12—H12A119.7
O2—C2—H2B110.1C11—C12—H12A119.7
C1—C2—H2B110.1C12—C13—C14119.61 (13)
O2—C2—H2C110.1C12—C13—H13A120.2
C1—C2—H2C110.1C14—C13—H13A120.2
H2B—C2—H2C108.4C13—C14—C9121.34 (12)
O2—C3—C4123.65 (12)C13—C14—H14A119.3
O2—C3—C8115.15 (11)C9—C14—H14A119.3
C4—C3—C8121.17 (12)O3—C15—C16109.67 (11)
C5—C4—C3119.38 (13)O3—C15—H15A109.7
C5—C4—H4C120.3C16—C15—H15A109.7
C3—C4—H4C120.3O3—C15—H15B109.7
C6—C5—C4120.42 (12)C16—C15—H15B109.7
C6—C5—H5A119.8H15A—C15—H15B108.2
C4—C5—H5A119.8O4—C16—N3124.25 (13)
C5—C6—C7119.76 (13)O4—C16—C15119.25 (12)
C5—C6—H6A120.1N3—C16—C15116.49 (11)
N1—N2—C1—O1−5.0 (2)C7—C8—C9—C10−55.87 (18)
N1—N2—C1—C2174.76 (12)C3—C8—C9—C10125.09 (14)
C3—O2—C2—C1−163.98 (11)C15—O3—C10—C11−25.80 (18)
O1—C1—C2—O2−175.55 (12)C15—O3—C10—C9155.02 (12)
N2—C1—C2—O24.71 (16)C14—C9—C10—O3−178.44 (11)
C2—O2—C3—C4−18.76 (19)C8—C9—C10—O3−0.38 (18)
C2—O2—C3—C8163.23 (12)C14—C9—C10—C112.38 (19)
O2—C3—C4—C5−178.61 (12)C8—C9—C10—C11−179.57 (12)
C8—C3—C4—C5−0.7 (2)O3—C10—C11—C12179.79 (12)
C3—C4—C5—C60.7 (2)C9—C10—C11—C12−1.1 (2)
C4—C5—C6—C70.0 (2)C10—C11—C12—C13−0.8 (2)
C5—C6—C7—C8−0.8 (2)C11—C12—C13—C141.2 (2)
C6—C7—C8—C30.82 (19)C12—C13—C14—C90.1 (2)
C6—C7—C8—C9−178.24 (12)C10—C9—C14—C13−1.9 (2)
O2—C3—C8—C7178.01 (11)C8—C9—C14—C13−179.96 (13)
C4—C3—C8—C7−0.05 (19)C10—O3—C15—C16−159.34 (11)
O2—C3—C8—C9−2.93 (18)N4—N3—C16—O44.7 (2)
C4—C3—C8—C9179.01 (12)N4—N3—C16—C15−175.62 (12)
C7—C8—C9—C14122.12 (14)O3—C15—C16—O4171.27 (12)
C3—C8—C9—C14−56.91 (18)O3—C15—C16—N3−8.42 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O4i0.924 (14)2.192 (15)3.059 (2)155.7 (15)
N1—H1B···O4ii0.930 (14)2.510 (17)3.0112 (18)114.1 (13)
N3—H3···N4iii0.900 (13)2.191 (15)2.9524 (18)141.9 (14)
N4—H4B···O1iv0.936 (14)2.267 (16)2.9873 (18)133.3 (14)
N1—H1B···O10.930 (14)2.348 (17)2.7873 (18)108.6 (13)
N2—H2···O20.906 (14)2.118 (17)2.5375 (16)107.1 (13)
N3—H3···O30.900 (13)2.230 (16)2.5977 (17)103.9 (12)
C5—H5A···N1v0.952.533.359 (2)146
C11—H11A···O1vi0.952.473.292 (2)145
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O4i0.924 (14)2.192 (15)3.059 (2)155.7 (15)
N1—H1B⋯O4ii0.930 (14)2.510 (17)3.0112 (18)114.1 (13)
N3—H3⋯N4iii0.900 (13)2.191 (15)2.9524 (18)141.9 (14)
N4—H4B⋯O1iv0.936 (14)2.267 (16)2.9873 (18)133.3 (14)
N1—H1B⋯O10.930 (14)2.348 (17)2.7873 (18)108.6 (13)
N2—H2⋯O20.906 (14)2.118 (17)2.5375 (16)107.1 (13)
N3—H3⋯O30.900 (13)2.230 (16)2.5977 (17)103.9 (12)
C5—H5A⋯N1v0.952.533.359 (2)146
C11—H11A⋯O1vi0.952.473.292 (2)145

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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Review 2.  Synthetic ion channels and pores (2004-2005).

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-18

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1.  Di-tert-butyl 2,2'-(biphenyl-2,2'-diyl-dioxy)diacetate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05

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Authors:  Qamar Ali; Zahid Hussain; Muhammad Raza Shah; Donald Vanderveer
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10

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