| Literature DB >> 21202060 |
Abstract
In the title compound, C(4)H(12)N(2) (2+)·2C(6)H(2)N(3)O(7) (-)·C(4)H(10)N(2), the piperazine-1,4-diium cations and piperazine mol-ecules lie on crystallographic inversion centres. In the crystal structure, inter-molecular N-H⋯O and N-H⋯N hydrogen bonds link the components to form two-dimensional layers parallel to the (001) plane. These layers are, in turn, connected by weak inter-molecular C-H⋯O hydrogen bonds and π-π stacking inter-actions [centroid-centroid distance between parallel aryl rings = 3.764 (2) Å, interplanar spacing = 3.500 (2) Å and ring offset = 1.387 (2) Å], forming a three-dimensional framework.Entities:
Year: 2008 PMID: 21202060 PMCID: PMC2960966 DOI: 10.1107/S1600536808005710
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H12N22+·2C6H2N3O7–·C4H10N2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2518 reflections | |
| θ = 2.7–26.2º | |
| µ = 0.14 mm−1 | |
| α = 98.140 (1)º | |
| β = 98.974 (1)º | Plate, yellow |
| γ = 109.250 (1)º | 0.20 × 0.10 × 0.06 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 2258 independent reflections |
| Radiation source: fine focus sealed Siemens Mo tube | 1917 reflections with |
| Monochromator: graphite | |
| θmax = 25.0º | |
| 0.3° wide ω exposures scans | θmin = 2.7º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1997) | |
| 6131 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2258 reflections | Δρmax = 0.27 e Å−3 |
| 208 parameters | Δρmin = −0.27 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.1576 (5) | 0.8052 (4) | 0.9002 (3) | 0.0332 (8) | |
| C2 | 0.2353 (5) | 0.7965 (5) | 1.0152 (3) | 0.0378 (9) | |
| H2 | 0.2296 | 0.6883 | 1.0348 | 0.045* | |
| C3 | 0.3230 (5) | 0.9530 (5) | 1.1019 (3) | 0.0348 (8) | |
| C4 | 0.3317 (5) | 1.1141 (5) | 1.0738 (3) | 0.0380 (9) | |
| H4 | 0.3912 | 1.2181 | 1.1329 | 0.046* | |
| C5 | 0.2518 (5) | 1.1200 (5) | 0.9578 (3) | 0.0371 (8) | |
| C6 | 0.1526 (5) | 0.9660 (5) | 0.8609 (3) | 0.0333 (8) | |
| C7 | 0.1883 (5) | 1.0168 (5) | 0.4896 (3) | 0.0392 (9) | |
| H7A | 0.3073 | 1.0068 | 0.5226 | 0.047* | |
| H7B | 0.1971 | 1.0570 | 0.4132 | 0.047* | |
| C8 | 0.0332 (5) | 0.8378 (5) | 0.4654 (3) | 0.0381 (9) | |
| H8A | 0.0549 | 0.7561 | 0.4034 | 0.046* | |
| H8B | 0.0337 | 0.7912 | 0.5397 | 0.046* | |
| C9 | 0.3474 (5) | 1.5596 (5) | 0.4793 (4) | 0.0405 (9) | |
| H9A | 0.4124 | 1.6869 | 0.4938 | 0.049* | |
| H9B | 0.2133 | 1.5352 | 0.4581 | 0.049* | |
| C10 | 0.5940 (5) | 1.5299 (5) | 0.6247 (3) | 0.0386 (9) | |
| H10A | 0.6210 | 1.4848 | 0.6976 | 0.046* | |
| H10B | 0.6639 | 1.6566 | 0.6425 | 0.046* | |
| N1 | 0.0732 (4) | 0.6390 (4) | 0.8092 (3) | 0.0405 (8) | |
| N2 | 0.4143 (5) | 0.9504 (4) | 1.2226 (3) | 0.0443 (8) | |
| N3 | 0.2705 (6) | 1.2965 (4) | 0.9349 (3) | 0.0528 (9) | |
| N4 | 0.1521 (4) | 1.1476 (4) | 0.5768 (3) | 0.0364 (7) | |
| H4A | 0.157 (6) | 1.118 (5) | 0.647 (4) | 0.044* | |
| H4B | 0.228 (6) | 1.255 (6) | 0.584 (4) | 0.044* | |
| N5 | 0.3922 (5) | 1.4953 (4) | 0.5905 (3) | 0.0383 (7) | |
| H5A | 0.359 (6) | 1.548 (5) | 0.649 (4) | 0.046* | |
| O1 | 0.0655 (4) | 0.9638 (4) | 0.7581 (2) | 0.0471 (7) | |
| O2 | 0.1103 (5) | 0.6367 (4) | 0.7077 (3) | 0.0579 (8) | |
| O3 | −0.0265 (5) | 0.5088 (4) | 0.8379 (3) | 0.0720 (10) | |
| O4 | 0.4179 (6) | 0.8106 (4) | 1.2447 (3) | 0.0925 (14) | |
| O5 | 0.4870 (5) | 1.0892 (4) | 1.2985 (3) | 0.0599 (9) | |
| O6 | 0.3035 (6) | 1.4152 (4) | 1.0227 (3) | 0.0831 (12) | |
| O7 | 0.2583 (6) | 1.3203 (4) | 0.8304 (3) | 0.0799 (12) |
| C1 | 0.0349 (19) | 0.0294 (18) | 0.0331 (19) | 0.0089 (15) | 0.0063 (15) | 0.0074 (15) |
| C2 | 0.044 (2) | 0.0331 (19) | 0.036 (2) | 0.0137 (17) | 0.0052 (17) | 0.0123 (16) |
| C3 | 0.041 (2) | 0.039 (2) | 0.0265 (18) | 0.0153 (16) | 0.0073 (15) | 0.0104 (15) |
| C4 | 0.043 (2) | 0.0330 (19) | 0.037 (2) | 0.0147 (16) | 0.0079 (16) | 0.0037 (15) |
| C5 | 0.048 (2) | 0.034 (2) | 0.0346 (19) | 0.0204 (17) | 0.0097 (17) | 0.0113 (15) |
| C6 | 0.0357 (19) | 0.038 (2) | 0.0319 (19) | 0.0159 (16) | 0.0114 (16) | 0.0127 (15) |
| C7 | 0.0343 (19) | 0.041 (2) | 0.043 (2) | 0.0122 (16) | 0.0077 (16) | 0.0143 (17) |
| C8 | 0.045 (2) | 0.0317 (19) | 0.040 (2) | 0.0151 (16) | 0.0065 (17) | 0.0120 (16) |
| C9 | 0.035 (2) | 0.0284 (18) | 0.055 (2) | 0.0098 (15) | 0.0019 (17) | 0.0097 (17) |
| C10 | 0.047 (2) | 0.0268 (18) | 0.0346 (19) | 0.0065 (16) | 0.0011 (16) | 0.0090 (15) |
| N1 | 0.0443 (19) | 0.0374 (18) | 0.0353 (18) | 0.0124 (15) | 0.0026 (14) | 0.0059 (14) |
| N2 | 0.052 (2) | 0.0418 (19) | 0.0361 (18) | 0.0139 (16) | 0.0038 (15) | 0.0122 (15) |
| N3 | 0.081 (3) | 0.0366 (19) | 0.045 (2) | 0.0290 (18) | 0.0066 (18) | 0.0097 (16) |
| N4 | 0.0375 (17) | 0.0305 (16) | 0.0325 (17) | 0.0015 (13) | 0.0018 (13) | 0.0119 (13) |
| N5 | 0.0465 (19) | 0.0312 (16) | 0.0364 (17) | 0.0113 (14) | 0.0139 (14) | 0.0050 (13) |
| O1 | 0.0584 (17) | 0.0417 (15) | 0.0355 (15) | 0.0130 (13) | −0.0024 (13) | 0.0163 (12) |
| O2 | 0.083 (2) | 0.0518 (18) | 0.0359 (16) | 0.0215 (16) | 0.0153 (15) | 0.0029 (13) |
| O3 | 0.082 (2) | 0.0404 (17) | 0.070 (2) | −0.0071 (16) | 0.0138 (18) | 0.0096 (16) |
| O4 | 0.140 (4) | 0.0456 (19) | 0.063 (2) | 0.017 (2) | −0.035 (2) | 0.0223 (17) |
| O5 | 0.082 (2) | 0.0534 (19) | 0.0335 (15) | 0.0252 (17) | −0.0068 (15) | −0.0042 (14) |
| O6 | 0.150 (4) | 0.0452 (19) | 0.061 (2) | 0.053 (2) | 0.010 (2) | 0.0046 (16) |
| O7 | 0.142 (4) | 0.0444 (19) | 0.049 (2) | 0.030 (2) | 0.005 (2) | 0.0194 (15) |
| C1—C2 | 1.366 (5) | C9—N5 | 1.465 (5) |
| C1—C6 | 1.454 (5) | C9—C10ii | 1.504 (5) |
| C1—N1 | 1.461 (5) | C9—H9A | 0.9700 |
| C2—C3 | 1.385 (5) | C9—H9B | 0.9700 |
| C2—H2 | 0.9300 | C10—N5 | 1.465 (5) |
| C3—C4 | 1.380 (5) | C10—C9ii | 1.504 (5) |
| C3—N2 | 1.441 (5) | C10—H10A | 0.9700 |
| C4—C5 | 1.373 (5) | C10—H10B | 0.9700 |
| C4—H4 | 0.9300 | N1—O3 | 1.210 (4) |
| C5—C6 | 1.442 (5) | N1—O2 | 1.224 (4) |
| C5—N3 | 1.464 (5) | N2—O4 | 1.210 (4) |
| C6—O1 | 1.243 (4) | N2—O5 | 1.221 (4) |
| C7—N4 | 1.475 (5) | N3—O6 | 1.215 (4) |
| C7—C8 | 1.508 (5) | N3—O7 | 1.219 (4) |
| C7—H7A | 0.9700 | N4—C8i | 1.484 (5) |
| C7—H7B | 0.9700 | N4—H4A | 0.86 (4) |
| C8—N4i | 1.484 (5) | N4—H4B | 0.86 (4) |
| C8—H8A | 0.9700 | N5—H5A | 0.86 (4) |
| C8—H8B | 0.9700 | ||
| C2—C1—C6 | 125.4 (3) | N5—C9—C10ii | 110.2 (3) |
| C2—C1—N1 | 117.1 (3) | N5—C9—H9A | 109.6 |
| C6—C1—N1 | 117.5 (3) | C10ii—C9—H9A | 109.6 |
| C1—C2—C3 | 118.3 (3) | N5—C9—H9B | 109.6 |
| C1—C2—H2 | 120.8 | C10ii—C9—H9B | 109.6 |
| C3—C2—H2 | 120.8 | H9A—C9—H9B | 108.1 |
| C4—C3—C2 | 121.2 (3) | N5—C10—C9ii | 109.1 (3) |
| C4—C3—N2 | 118.7 (3) | N5—C10—H10A | 109.9 |
| C2—C3—N2 | 120.0 (3) | C9ii—C10—H10A | 109.9 |
| C5—C4—C3 | 119.5 (3) | N5—C10—H10B | 109.9 |
| C5—C4—H4 | 120.2 | C9ii—C10—H10B | 109.9 |
| C3—C4—H4 | 120.2 | H10A—C10—H10B | 108.3 |
| C4—C5—C6 | 124.3 (3) | O3—N1—O2 | 122.7 (3) |
| C4—C5—N3 | 116.0 (3) | O3—N1—C1 | 118.9 (3) |
| C6—C5—N3 | 119.7 (3) | O2—N1—C1 | 118.3 (3) |
| O1—C6—C5 | 126.4 (3) | O4—N2—O5 | 122.3 (3) |
| O1—C6—C1 | 122.4 (3) | O4—N2—C3 | 118.7 (3) |
| C5—C6—C1 | 111.1 (3) | O5—N2—C3 | 119.0 (3) |
| N4—C7—C8 | 110.9 (3) | O6—N3—O7 | 122.6 (4) |
| N4—C7—H7A | 109.5 | O6—N3—C5 | 117.9 (3) |
| C8—C7—H7A | 109.5 | O7—N3—C5 | 119.5 (3) |
| N4—C7—H7B | 109.5 | C7—N4—C8i | 112.2 (3) |
| C8—C7—H7B | 109.5 | C7—N4—H4A | 109 (3) |
| H7A—C7—H7B | 108.0 | C8i—N4—H4A | 109 (3) |
| N4i—C8—C7 | 110.4 (3) | C7—N4—H4B | 114 (3) |
| N4i—C8—H8A | 109.6 | C8i—N4—H4B | 102 (3) |
| C7—C8—H8A | 109.6 | H4A—N4—H4B | 110 (4) |
| N4i—C8—H8B | 109.6 | C10—N5—C9 | 110.9 (3) |
| C7—C8—H8B | 109.6 | C10—N5—H5A | 109 (3) |
| H8A—C8—H8B | 108.1 | C9—N5—H5A | 109 (3) |
| C6—C1—C2—C3 | −2.3 (6) | N4—C7—C8—N4i | 55.1 (4) |
| N1—C1—C2—C3 | 177.5 (3) | C2—C1—N1—O3 | 44.6 (5) |
| C1—C2—C3—C4 | 0.2 (6) | C6—C1—N1—O3 | −135.6 (4) |
| C1—C2—C3—N2 | −177.1 (3) | C2—C1—N1—O2 | −133.7 (4) |
| C2—C3—C4—C5 | 0.2 (6) | C6—C1—N1—O2 | 46.1 (5) |
| N2—C3—C4—C5 | 177.5 (3) | C4—C3—N2—O4 | −175.0 (4) |
| C3—C4—C5—C6 | 1.6 (6) | C2—C3—N2—O4 | 2.4 (6) |
| C3—C4—C5—N3 | −178.8 (3) | C4—C3—N2—O5 | 4.3 (5) |
| C4—C5—C6—O1 | 173.8 (4) | C2—C3—N2—O5 | −178.4 (4) |
| N3—C5—C6—O1 | −5.7 (6) | C4—C5—N3—O6 | −20.6 (6) |
| C4—C5—C6—C1 | −3.2 (5) | C6—C5—N3—O6 | 159.0 (4) |
| N3—C5—C6—C1 | 177.2 (3) | C4—C5—N3—O7 | 157.2 (4) |
| C2—C1—C6—O1 | −173.5 (4) | C6—C5—N3—O7 | −23.2 (6) |
| N1—C1—C6—O1 | 6.7 (5) | C8—C7—N4—C8i | −56.1 (4) |
| C2—C1—C6—C5 | 3.7 (5) | C9ii—C10—N5—C9 | −58.5 (4) |
| N1—C1—C6—C5 | −176.1 (3) | C10ii—C9—N5—C10 | 59.1 (4) |
| H··· | ||||
| N4—H4A···O1 | 0.86 (4) | 1.95 (4) | 2.745 (4) | 153 (4) |
| N4—H4A···O7 | 0.86 (4) | 2.31 (4) | 2.870 (5) | 123 (3) |
| N4—H4B···N5 | 0.86 (4) | 1.94 (4) | 2.799 (4) | 176 (4) |
| N5—H5A···O2iii | 0.86 (4) | 2.41 (4) | 3.153 (5) | 145 (4) |
| C2—H2···O6iv | 0.93 | 2.47 | 3.335 (5) | 155 |
| C7—H7B···O1i | 0.97 | 2.52 | 3.211 (5) | 128 |
| C8—H8B···O1 | 0.97 | 2.60 | 3.267 (5) | 127 |
| C8—H8B···O2 | 0.97 | 2.52 | 3.458 (5) | 162 |
| C9—H9A···O5v | 0.97 | 2.60 | 3.272 (5) | 127 |
| C10—H10A···O4vi | 0.97 | 2.52 | 3.310 (5) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.86 (4) | 1.95 (4) | 2.745 (4) | 153 (4) |
| N4—H4 | 0.86 (4) | 2.31 (4) | 2.870 (5) | 123 (3) |
| N4—H4 | 0.86 (4) | 1.94 (4) | 2.799 (4) | 176 (4) |
| N5—H5 | 0.86 (4) | 2.41 (4) | 3.153 (5) | 145 (4) |
| C2—H2⋯O6ii | 0.93 | 2.47 | 3.335 (5) | 155 |
| C7—H7 | 0.97 | 2.52 | 3.211 (5) | 128 |
| C8—H8 | 0.97 | 2.60 | 3.267 (5) | 127 |
| C8—H8 | 0.97 | 2.52 | 3.458 (5) | 162 |
| C9—H9 | 0.97 | 2.60 | 3.272 (5) | 127 |
| C10—H10 | 0.97 | 2.52 | 3.310 (5) | 138 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .