| Literature DB >> 21589077 |
Ping-Xian Liu, Zhi-An Li, Dao-Yong Chen.
Abstract
During the crystallization of the title compound, 4C(3)H(5)N(2) (+)·C(4)H(12)N(2) (+)·2C(9)H(3)O(6) (3-)·2H(2)O, the acidic protons were transferred to the imidazole and piperazine N atoms, forming the final 4:1:2:2 hydrated mixed salt. The mean planes of the three carboxyl-ate groups in the anion are twisted with respect to the the central benzene ring, making dihedral angles of 13.5 (1), 14.5 (1) and 16.9 (1)°. In the crystal, the component ions are linked into a three-dimensional network by a combination of inter-molecular N-H⋯O, O-H⋯O and weak C-H⋯O hydrogen bonds. Further stabilization is provided by π-π stacking inter-actions with centroid-centroid distances of 3.393 (2) Å and weak C=O⋯π inter-actions [O-centroid = 3.363 (2) Å].Entities:
Year: 2010 PMID: 21589077 PMCID: PMC3009064 DOI: 10.1107/S1600536810041310
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2102 reflections | |
| θ = 2.4–23.2° | |
| µ = 0.12 mm−1 | |
| α = 96.895 (1)° | |
| β = 95.201 (1)° | Block, colorless |
| γ = 101.439 (2)° | 0.20 × 0.13 × 0.10 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 3925 independent reflections |
| Radiation source: fine focus sealed Siemens Mo tube | 2757 reflections with |
| graphite | |
| 0.3° wide ω scans | θmax = 27.0°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 10341 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3925 reflections | (Δ/σ)max = 0.001 |
| 286 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2128 (2) | −0.05764 (17) | 0.89657 (11) | 0.0263 (4) | |
| C2 | 0.1004 (2) | −0.17749 (17) | 0.84080 (11) | 0.0263 (4) | |
| H2 | 0.0409 | −0.2481 | 0.8743 | 0.032* | |
| C3 | 0.0756 (2) | −0.19338 (17) | 0.73487 (11) | 0.0274 (4) | |
| C4 | 0.1609 (2) | −0.08588 (18) | 0.68651 (12) | 0.0295 (4) | |
| H4 | 0.1465 | −0.0964 | 0.6159 | 0.035* | |
| C5 | 0.2676 (2) | 0.03761 (17) | 0.74101 (12) | 0.0267 (4) | |
| C6 | 0.2947 (2) | 0.04896 (17) | 0.84640 (12) | 0.0274 (4) | |
| H6 | 0.3694 | 0.1297 | 0.8838 | 0.033* | |
| C7 | 0.2458 (2) | −0.04026 (18) | 1.01134 (12) | 0.0297 (4) | |
| C8 | −0.0459 (2) | −0.32408 (19) | 0.67241 (12) | 0.0332 (4) | |
| C9 | 0.3502 (2) | 0.15651 (19) | 0.68720 (13) | 0.0310 (4) | |
| C10 | 0.2728 (3) | −0.0067 (2) | 1.32738 (13) | 0.0391 (5) | |
| H10 | 0.3430 | 0.0790 | 1.3175 | 0.047* | |
| C11 | 0.1114 (3) | −0.2190 (2) | 1.29964 (14) | 0.0432 (5) | |
| H11 | 0.0505 | −0.3063 | 1.2661 | 0.052* | |
| C12 | 0.1222 (3) | −0.1753 (2) | 1.39965 (13) | 0.0421 (5) | |
| H12 | 0.0702 | −0.2261 | 1.4484 | 0.051* | |
| C13 | 0.2479 (3) | 0.3752 (2) | 0.99158 (14) | 0.0401 (5) | |
| H13 | 0.2379 | 0.2876 | 1.0111 | 0.048* | |
| C14 | 0.2247 (3) | 0.4896 (2) | 1.04845 (14) | 0.0396 (5) | |
| H14 | 0.1949 | 0.4961 | 1.1150 | 0.048* | |
| C15 | 0.2920 (3) | 0.5449 (2) | 0.90127 (14) | 0.0400 (5) | |
| H15 | 0.3176 | 0.5954 | 0.8480 | 0.048* | |
| C16 | 0.3894 (3) | 0.4987 (2) | 0.58396 (13) | 0.0422 (5) | |
| H16A | 0.3773 | 0.5318 | 0.6539 | 0.051* | |
| H16B | 0.2710 | 0.4341 | 0.5557 | 0.051* | |
| C17 | 0.5803 (3) | 0.3814 (2) | 0.47501 (14) | 0.0462 (5) | |
| H17A | 0.4688 | 0.3126 | 0.4428 | 0.055* | |
| H17B | 0.6910 | 0.3387 | 0.4747 | 0.055* | |
| N1 | 0.2057 (2) | −0.11215 (17) | 1.25638 (11) | 0.0396 (4) | |
| H1A | 0.217 (3) | −0.111 (2) | 1.1923 (16) | 0.048* | |
| N2 | 0.2245 (2) | −0.04171 (17) | 1.41557 (11) | 0.0389 (4) | |
| H2A | 0.265 (3) | 0.014 (2) | 1.4745 (16) | 0.047* | |
| N3 | 0.2891 (2) | 0.41179 (16) | 0.89917 (12) | 0.0374 (4) | |
| H3A | 0.320 (3) | 0.355 (2) | 0.8468 (14) | 0.045* | |
| N4 | 0.2528 (2) | 0.59528 (17) | 0.99092 (11) | 0.0361 (4) | |
| H4A | 0.240 (3) | 0.686 (2) | 1.0107 (14) | 0.043* | |
| N5 | 0.5516 (2) | 0.42669 (17) | 0.58090 (11) | 0.0388 (4) | |
| H5A | 0.667 (3) | 0.486 (2) | 0.6204 (14) | 0.047* | |
| H5B | 0.520 (3) | 0.350 (2) | 0.6120 (15) | 0.047* | |
| O1 | 0.3047 (2) | 0.07841 (13) | 1.05718 (9) | 0.0488 (4) | |
| O2 | 0.21058 (18) | −0.14867 (12) | 1.05409 (8) | 0.0379 (3) | |
| O3 | −0.15144 (18) | −0.40803 (13) | 0.71833 (9) | 0.0450 (4) | |
| O4 | −0.0363 (2) | −0.34118 (16) | 0.58017 (9) | 0.0617 (5) | |
| O5 | 0.3573 (2) | 0.13542 (13) | 0.59351 (9) | 0.0436 (3) | |
| O6 | 0.41142 (19) | 0.27435 (12) | 0.73950 (9) | 0.0415 (3) | |
| O7 | 0.4407 (2) | 0.26393 (16) | 1.22724 (10) | 0.0498 (4) | |
| H7A | 0.407 (3) | 0.201 (3) | 1.1749 (19) | 0.075* | |
| H7B | 0.342 (3) | 0.306 (3) | 1.2364 (18) | 0.075* |
| C1 | 0.0326 (9) | 0.0259 (9) | 0.0207 (8) | 0.0069 (7) | 0.0028 (6) | 0.0045 (6) |
| C2 | 0.0329 (9) | 0.0236 (9) | 0.0223 (8) | 0.0025 (7) | 0.0046 (6) | 0.0073 (6) |
| C3 | 0.0293 (8) | 0.0277 (10) | 0.0243 (8) | 0.0042 (7) | 0.0023 (6) | 0.0038 (7) |
| C4 | 0.0368 (9) | 0.0330 (10) | 0.0186 (7) | 0.0064 (8) | 0.0040 (6) | 0.0047 (7) |
| C5 | 0.0301 (9) | 0.0256 (9) | 0.0265 (8) | 0.0071 (7) | 0.0068 (6) | 0.0069 (7) |
| C6 | 0.0330 (9) | 0.0218 (9) | 0.0261 (8) | 0.0036 (7) | 0.0025 (7) | 0.0027 (7) |
| C7 | 0.0397 (10) | 0.0282 (10) | 0.0213 (8) | 0.0080 (8) | 0.0034 (7) | 0.0026 (7) |
| C8 | 0.0360 (9) | 0.0336 (11) | 0.0256 (8) | 0.0009 (8) | −0.0006 (7) | 0.0013 (7) |
| C9 | 0.0357 (9) | 0.0301 (10) | 0.0307 (9) | 0.0095 (8) | 0.0088 (7) | 0.0103 (7) |
| C10 | 0.0498 (11) | 0.0398 (12) | 0.0308 (9) | 0.0124 (9) | 0.0099 (8) | 0.0090 (8) |
| C11 | 0.0501 (11) | 0.0425 (12) | 0.0332 (10) | 0.0025 (9) | 0.0019 (8) | 0.0040 (9) |
| C12 | 0.0477 (11) | 0.0478 (13) | 0.0322 (10) | 0.0064 (10) | 0.0094 (8) | 0.0140 (9) |
| C13 | 0.0473 (11) | 0.0327 (11) | 0.0427 (10) | 0.0080 (9) | 0.0089 (8) | 0.0128 (9) |
| C14 | 0.0465 (11) | 0.0394 (12) | 0.0352 (10) | 0.0105 (9) | 0.0087 (8) | 0.0086 (8) |
| C15 | 0.0500 (11) | 0.0342 (12) | 0.0376 (10) | 0.0081 (9) | 0.0112 (8) | 0.0097 (8) |
| C16 | 0.0441 (11) | 0.0506 (13) | 0.0269 (9) | −0.0014 (9) | 0.0040 (8) | 0.0040 (8) |
| C17 | 0.0566 (12) | 0.0361 (12) | 0.0432 (11) | 0.0085 (10) | −0.0001 (9) | 0.0013 (9) |
| N1 | 0.0508 (10) | 0.0500 (11) | 0.0216 (7) | 0.0155 (8) | 0.0074 (7) | 0.0090 (7) |
| N2 | 0.0487 (9) | 0.0454 (11) | 0.0233 (7) | 0.0121 (8) | 0.0055 (7) | 0.0035 (7) |
| N3 | 0.0446 (9) | 0.0289 (9) | 0.0390 (9) | 0.0081 (7) | 0.0091 (7) | 0.0020 (7) |
| N4 | 0.0434 (9) | 0.0264 (9) | 0.0391 (8) | 0.0086 (7) | 0.0076 (7) | 0.0037 (7) |
| N5 | 0.0455 (10) | 0.0309 (9) | 0.0344 (8) | −0.0067 (8) | −0.0049 (7) | 0.0143 (7) |
| O1 | 0.0874 (11) | 0.0259 (7) | 0.0268 (6) | 0.0060 (7) | −0.0025 (6) | −0.0047 (5) |
| O2 | 0.0642 (9) | 0.0285 (7) | 0.0213 (6) | 0.0072 (6) | 0.0072 (5) | 0.0076 (5) |
| O3 | 0.0521 (8) | 0.0360 (8) | 0.0371 (7) | −0.0124 (6) | 0.0057 (6) | 0.0016 (6) |
| O4 | 0.0783 (11) | 0.0614 (10) | 0.0263 (7) | −0.0223 (8) | 0.0034 (7) | −0.0059 (6) |
| O5 | 0.0648 (9) | 0.0375 (8) | 0.0297 (7) | 0.0058 (6) | 0.0163 (6) | 0.0107 (5) |
| O6 | 0.0592 (8) | 0.0252 (7) | 0.0393 (7) | 0.0009 (6) | 0.0146 (6) | 0.0079 (6) |
| O7 | 0.0637 (10) | 0.0433 (9) | 0.0349 (7) | −0.0004 (7) | 0.0066 (7) | −0.0058 (6) |
| C1—C6 | 1.382 (2) | C12—H12 | 0.9300 |
| C1—C2 | 1.385 (2) | C13—C14 | 1.337 (3) |
| C1—C7 | 1.513 (2) | C13—N3 | 1.369 (2) |
| C2—C3 | 1.396 (2) | C13—H13 | 0.9300 |
| C2—H2 | 0.9300 | C14—N4 | 1.369 (2) |
| C3—C4 | 1.382 (2) | C14—H14 | 0.9300 |
| C3—C8 | 1.517 (2) | C15—N3 | 1.317 (2) |
| C4—C5 | 1.390 (2) | C15—N4 | 1.318 (2) |
| C4—H4 | 0.9300 | C15—H15 | 0.9300 |
| C5—C6 | 1.391 (2) | C16—N5 | 1.481 (3) |
| C5—C9 | 1.506 (2) | C16—C17i | 1.497 (3) |
| C6—H6 | 0.9300 | C16—H16A | 0.9700 |
| C7—O1 | 1.236 (2) | C16—H16B | 0.9700 |
| C7—O2 | 1.272 (2) | C17—N5 | 1.477 (2) |
| C8—O4 | 1.233 (2) | C17—C16i | 1.497 (3) |
| C8—O3 | 1.265 (2) | C17—H17A | 0.9700 |
| C9—O5 | 1.251 (2) | C17—H17B | 0.9700 |
| C9—O6 | 1.264 (2) | N1—H1A | 0.87 (2) |
| C10—N1 | 1.307 (2) | N2—H2A | 0.90 (2) |
| C10—N2 | 1.324 (2) | N3—H3A | 0.915 (19) |
| C10—H10 | 0.9300 | N4—H4A | 0.93 (2) |
| C11—C12 | 1.345 (3) | N5—H5A | 0.98 (2) |
| C11—N1 | 1.361 (2) | N5—H5B | 0.91 (2) |
| C11—H11 | 0.9300 | O7—H7A | 0.86 (3) |
| C12—N2 | 1.365 (2) | O7—H7B | 0.90 (3) |
| C6—C1—C2 | 119.32 (14) | N3—C13—H13 | 126.6 |
| C6—C1—C7 | 119.29 (14) | C13—C14—N4 | 107.51 (16) |
| C2—C1—C7 | 121.39 (15) | C13—C14—H14 | 126.2 |
| C1—C2—C3 | 120.66 (15) | N4—C14—H14 | 126.2 |
| C1—C2—H2 | 119.7 | N3—C15—N4 | 109.13 (17) |
| C3—C2—H2 | 119.7 | N3—C15—H15 | 125.4 |
| C4—C3—C2 | 118.85 (14) | N4—C15—H15 | 125.4 |
| C4—C3—C8 | 119.66 (14) | N5—C16—C17i | 110.90 (16) |
| C2—C3—C8 | 121.48 (15) | N5—C16—H16A | 109.5 |
| C3—C4—C5 | 121.49 (14) | C17i—C16—H16A | 109.5 |
| C3—C4—H4 | 119.3 | N5—C16—H16B | 109.5 |
| C5—C4—H4 | 119.3 | C17i—C16—H16B | 109.5 |
| C4—C5—C6 | 118.38 (15) | H16A—C16—H16B | 108.0 |
| C4—C5—C9 | 120.74 (14) | N5—C17—C16i | 111.07 (16) |
| C6—C5—C9 | 120.88 (15) | N5—C17—H17A | 109.4 |
| C1—C6—C5 | 121.22 (15) | C16i—C17—H17A | 109.4 |
| C1—C6—H6 | 119.4 | N5—C17—H17B | 109.4 |
| C5—C6—H6 | 119.4 | C16i—C17—H17B | 109.4 |
| O1—C7—O2 | 124.44 (15) | H17A—C17—H17B | 108.0 |
| O1—C7—C1 | 117.75 (16) | C10—N1—C11 | 108.59 (15) |
| O2—C7—C1 | 117.81 (14) | C10—N1—H1A | 124.3 (14) |
| O4—C8—O3 | 124.28 (16) | C11—N1—H1A | 127.1 (14) |
| O4—C8—C3 | 117.93 (16) | C10—N2—C12 | 108.49 (16) |
| O3—C8—C3 | 117.79 (14) | C10—N2—H2A | 122.6 (13) |
| O5—C9—O6 | 122.58 (16) | C12—N2—H2A | 128.7 (13) |
| O5—C9—C5 | 119.37 (16) | C15—N3—C13 | 108.45 (16) |
| O6—C9—C5 | 118.05 (14) | C15—N3—H3A | 125.6 (13) |
| N1—C10—N2 | 108.95 (18) | C13—N3—H3A | 125.7 (12) |
| N1—C10—H10 | 125.5 | C15—N4—C14 | 108.03 (16) |
| N2—C10—H10 | 125.5 | C15—N4—H4A | 126.1 (12) |
| C12—C11—N1 | 107.52 (17) | C14—N4—H4A | 125.8 (12) |
| C12—C11—H11 | 126.2 | C17—N5—C16 | 110.82 (14) |
| N1—C11—H11 | 126.2 | C17—N5—H5A | 113.0 (11) |
| C11—C12—N2 | 106.45 (17) | C16—N5—H5A | 110.0 (11) |
| C11—C12—H12 | 126.8 | C17—N5—H5B | 108.4 (13) |
| N2—C12—H12 | 126.8 | C16—N5—H5B | 107.1 (13) |
| C14—C13—N3 | 106.88 (17) | H5A—N5—H5B | 107.3 (16) |
| C14—C13—H13 | 126.6 | H7A—O7—H7B | 108 (2) |
| C6—C1—C2—C3 | 2.5 (2) | C4—C3—C8—O3 | −166.35 (16) |
| C7—C1—C2—C3 | −178.26 (15) | C2—C3—C8—O3 | 12.2 (3) |
| C1—C2—C3—C4 | −1.7 (3) | C4—C5—C9—O5 | −14.7 (3) |
| C1—C2—C3—C8 | 179.66 (15) | C6—C5—C9—O5 | 165.86 (16) |
| C2—C3—C4—C5 | −1.0 (3) | C4—C5—C9—O6 | 165.85 (16) |
| C8—C3—C4—C5 | 177.65 (15) | C6—C5—C9—O6 | −13.6 (2) |
| C3—C4—C5—C6 | 2.9 (3) | N1—C11—C12—N2 | −0.3 (2) |
| C3—C4—C5—C9 | −176.58 (15) | N3—C13—C14—N4 | −0.3 (2) |
| C2—C1—C6—C5 | −0.5 (2) | N2—C10—N1—C11 | −0.1 (2) |
| C7—C1—C6—C5 | −179.78 (15) | C12—C11—N1—C10 | 0.3 (2) |
| C4—C5—C6—C1 | −2.1 (2) | N1—C10—N2—C12 | 0.0 (2) |
| C9—C5—C6—C1 | 177.32 (15) | C11—C12—N2—C10 | 0.2 (2) |
| C6—C1—C7—O1 | 17.1 (2) | N4—C15—N3—C13 | −0.5 (2) |
| C2—C1—C7—O1 | −162.20 (16) | C14—C13—N3—C15 | 0.5 (2) |
| C6—C1—C7—O2 | −163.16 (15) | N3—C15—N4—C14 | 0.3 (2) |
| C2—C1—C7—O2 | 17.6 (2) | C13—C14—N4—C15 | 0.0 (2) |
| C4—C3—C8—O4 | 13.2 (3) | C16i—C17—N5—C16 | 56.2 (2) |
| C2—C3—C8—O4 | −168.22 (17) | C17i—C16—N5—C17 | −56.1 (2) |
| H··· | ||||
| N1—H1A···O2 | 0.87 (2) | 1.83 (2) | 2.6870 (18) | 166.9 (19) |
| N2—H2A···O5ii | 0.90 (2) | 1.86 (2) | 2.7522 (19) | 177.4 (19) |
| N3—H3A···O6 | 0.915 (19) | 1.80 (2) | 2.701 (2) | 168.8 (18) |
| N4—H4A···O2iii | 0.93 (2) | 1.74 (2) | 2.668 (2) | 176.6 (18) |
| N5—H5A···O3iv | 0.98 (2) | 1.83 (2) | 2.7872 (19) | 166.7 (17) |
| N5—H5A···O4iv | 0.98 (2) | 2.60 (2) | 3.366 (2) | 135.7 (14) |
| N5—H5B···O5 | 0.91 (2) | 2.19 (2) | 2.985 (2) | 145.2 (16) |
| N5—H5B···O6 | 0.91 (2) | 2.10 (2) | 2.888 (2) | 145.1 (18) |
| O7—H7A···O1 | 0.86 (3) | 1.86 (3) | 2.7184 (17) | 171 (2) |
| O7—H7B···O3v | 0.90 (3) | 1.95 (3) | 2.840 (2) | 169 (2) |
| C10—H10···O7 | 0.93 | 2.35 | 3.217 (3) | 156 |
| C12—H12···O4ii | 0.93 | 2.32 | 3.244 (2) | 175 |
| C13—H13···O1 | 0.93 | 2.36 | 3.267 (2) | 164 |
| C14—H14···O3v | 0.93 | 2.51 | 3.372 (2) | 154 |
| C15—H15···O7vi | 0.93 | 2.38 | 3.186 (2) | 145 |
| C16—H16B···O4vii | 0.97 | 2.32 | 3.200 (2) | 150 |
| C16—H16A···O7vi | 0.97 | 2.48 | 3.207 (2) | 132 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.87 (2) | 1.83 (2) | 2.6870 (18) | 166.9 (19) |
| N2—H2 | 0.90 (2) | 1.86 (2) | 2.7522 (19) | 177.4 (19) |
| N3—H3 | 0.915 (19) | 1.80 (2) | 2.701 (2) | 168.8 (18) |
| N4—H4 | 0.93 (2) | 1.74 (2) | 2.668 (2) | 176.6 (18) |
| N5—H5 | 0.98 (2) | 1.83 (2) | 2.7872 (19) | 166.7 (17) |
| N5—H5 | 0.98 (2) | 2.60 (2) | 3.366 (2) | 135.7 (14) |
| N5—H5 | 0.91 (2) | 2.19 (2) | 2.985 (2) | 145.2 (16) |
| N5—H5 | 0.91 (2) | 2.10 (2) | 2.888 (2) | 145.1 (18) |
| O7—H7 | 0.86 (3) | 1.86 (3) | 2.7184 (17) | 171 (2) |
| O7—H7 | 0.90 (3) | 1.95 (3) | 2.840 (2) | 169 (2) |
| C10—H10⋯O7 | 0.93 | 2.35 | 3.217 (3) | 156 |
| C12—H12⋯O4i | 0.93 | 2.32 | 3.244 (2) | 175 |
| C13—H13⋯O1 | 0.93 | 2.36 | 3.267 (2) | 164 |
| C14—H14⋯O3iv | 0.93 | 2.51 | 3.372 (2) | 154 |
| C15—H15⋯O7v | 0.93 | 2.38 | 3.186 (2) | 145 |
| C16—H16 | 0.97 | 2.32 | 3.200 (2) | 150 |
| C16—H16 | 0.97 | 2.48 | 3.207 (2) | 132 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .