| Literature DB >> 21201896 |
Xiao Tao, Xiao-Qing Zhang, Lin Yuan, Jin-Tang Wang.
Abstract
The title compound, C(19)H(21)NOS, is an inter-mediate for the synthesis of duloxetine hydro-chloride. In the mol-ecular structure, the thio-phene and naphthalene ring systems make a dihedral angle of 87.5°. All bond lengths and angles involving heteroatoms are as expected. In the crystal structure, no classical hydrogen bonds are found.Entities:
Year: 2008 PMID: 21201896 PMCID: PMC2960821 DOI: 10.1107/S1600536808003255
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H21NOS | |
| Monoclinic, | Melting point = 386–388 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 25 reflections | |
| θ = 10–13º | |
| µ = 0.19 mm−1 | |
| β = 104.53 (3)º | |
| Block, brown | |
| 0.40 × 0.30 × 0.10 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 26.0º |
| Monochromator: graphite | θmin = 2.4º |
| ω/2θ scans | |
| Absorption correction: ψ scan(North | |
| 3 standard reflections | |
| 3550 measured reflections | every 200 reflections |
| 3352 independent reflections | intensity decay: <1% |
| 2009 reflections with |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 3352 reflections | Δρmax = 0.45 e Å−3 |
| 199 parameters | Δρmin = −0.32 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| S | 0.03342 (12) | 0.25309 (6) | 0.17997 (10) | 0.0561 (3) | |
| O | 0.1693 (2) | 0.34125 (12) | 0.0007 (2) | 0.0445 (6) | |
| N | −0.1370 (3) | 0.47356 (16) | −0.2560 (3) | 0.0517 (8) | |
| C1 | −0.2401 (5) | 0.4470 (2) | −0.3807 (5) | 0.0777 (14) | |
| H1A | −0.2777 | 0.4015 | −0.3607 | 0.117* | |
| H1B | −0.1929 | 0.4412 | −0.4547 | 0.117* | |
| H1C | −0.3173 | 0.4809 | −0.4086 | 0.117* | |
| C2 | −0.0803 (5) | 0.5421 (2) | −0.2843 (5) | 0.0753 (13) | |
| H2A | −0.0133 | 0.5593 | −0.2016 | 0.113* | |
| H2B | −0.1575 | 0.5760 | −0.3123 | 0.113* | |
| H2C | −0.0322 | 0.5367 | −0.3577 | 0.113* | |
| C3 | −0.0227 (4) | 0.4218 (2) | −0.2029 (4) | 0.0517 (10) | |
| H3A | 0.0559 | 0.4461 | −0.1383 | 0.062* | |
| H3B | 0.0131 | 0.4041 | −0.2800 | 0.062* | |
| C4 | −0.0708 (4) | 0.3584 (2) | −0.1295 (4) | 0.0506 (10) | |
| H4A | −0.1016 | 0.3758 | −0.0493 | 0.061* | |
| H4B | −0.1527 | 0.3357 | −0.1924 | 0.061* | |
| C5 | 0.0463 (4) | 0.30309 (19) | −0.0816 (4) | 0.0439 (9) | |
| H5A | 0.0711 | 0.2822 | −0.1634 | 0.053* | |
| C6 | 0.0029 (4) | 0.24339 (18) | 0.0033 (4) | 0.0406 (8) | |
| C7 | −0.0719 (4) | 0.17959 (18) | −0.0465 (4) | 0.043 | |
| H7A | −0.0997 | 0.1649 | −0.1392 | 0.052* | |
| C8 | −0.0976 (4) | 0.1414 (2) | 0.0708 (4) | 0.0542 (10) | |
| H8A | −0.1447 | 0.0973 | 0.0620 | 0.065* | |
| C9 | −0.0482 (4) | 0.1743 (2) | 0.1943 (4) | 0.0510 (10) | |
| H9A | −0.0580 | 0.1556 | 0.2785 | 0.061* | |
| C10 | 0.3039 (4) | 0.31259 (19) | 0.0180 (3) | 0.0403 (8) | |
| C11 | 0.3328 (4) | 0.2446 (2) | −0.0182 (4) | 0.0498 (9) | |
| H11A | 0.2584 | 0.2131 | −0.0572 | 0.060* | |
| C12 | 0.4781 (5) | 0.2225 (2) | 0.0045 (4) | 0.0574 (11) | |
| H12A | 0.4982 | 0.1762 | −0.0211 | 0.069* | |
| C13 | 0.5882 (5) | 0.2673 (2) | 0.0627 (4) | 0.0603 (11) | |
| H13A | 0.6825 | 0.2515 | 0.0761 | 0.072* | |
| C14 | 0.5612 (4) | 0.3372 (2) | 0.1027 (4) | 0.0496 (10) | |
| C15 | 0.6714 (4) | 0.3854 (3) | 0.1646 (4) | 0.0677 (13) | |
| H15A | 0.7665 | 0.3704 | 0.1814 | 0.081* | |
| C16 | 0.6431 (5) | 0.4528 (3) | 0.2002 (5) | 0.0746 (13) | |
| H16A | 0.7185 | 0.4836 | 0.2397 | 0.089* | |
| C17 | 0.5021 (5) | 0.4765 (2) | 0.1781 (4) | 0.0655 (12) | |
| H17A | 0.4837 | 0.5230 | 0.2040 | 0.079* | |
| C18 | 0.3900 (4) | 0.4320 (2) | 0.1186 (4) | 0.0481 (9) | |
| H18A | 0.2961 | 0.4485 | 0.1038 | 0.058* | |
| C19 | 0.4161 (4) | 0.36147 (19) | 0.0798 (3) | 0.0409 (8) |
| S | 0.0651 (7) | 0.0585 (6) | 0.0425 (5) | −0.0028 (5) | 0.0094 (5) | −0.0023 (5) |
| O | 0.0335 (13) | 0.0410 (14) | 0.0566 (15) | −0.0007 (11) | 0.0070 (11) | −0.0068 (11) |
| N | 0.0482 (19) | 0.0464 (18) | 0.058 (2) | 0.0008 (15) | 0.0083 (15) | 0.0088 (15) |
| C1 | 0.065 (3) | 0.070 (3) | 0.081 (3) | −0.003 (2) | −0.011 (2) | 0.018 (3) |
| C2 | 0.074 (3) | 0.054 (3) | 0.095 (4) | −0.003 (2) | 0.017 (3) | 0.013 (3) |
| C3 | 0.041 (2) | 0.055 (2) | 0.057 (2) | −0.0018 (18) | 0.0077 (18) | 0.0090 (19) |
| C4 | 0.040 (2) | 0.055 (2) | 0.053 (2) | 0.0009 (18) | 0.0033 (17) | 0.0086 (19) |
| C5 | 0.044 (2) | 0.045 (2) | 0.0414 (19) | −0.0021 (17) | 0.0088 (16) | −0.0027 (16) |
| C6 | 0.0393 (19) | 0.044 (2) | 0.0367 (17) | 0.0071 (16) | 0.0068 (14) | 0.0008 (16) |
| C7 | 0.043 | 0.043 | 0.043 | 0.000 | 0.011 | 0.000 |
| C8 | 0.060 (3) | 0.041 (2) | 0.059 (3) | −0.0030 (19) | 0.012 (2) | −0.0004 (19) |
| C9 | 0.062 (3) | 0.047 (2) | 0.046 (2) | 0.0077 (19) | 0.0170 (19) | 0.0069 (18) |
| C10 | 0.0380 (19) | 0.048 (2) | 0.0372 (19) | 0.0080 (16) | 0.0127 (15) | 0.0072 (16) |
| C11 | 0.055 (2) | 0.050 (2) | 0.048 (2) | 0.0039 (19) | 0.0182 (18) | 0.0050 (19) |
| C12 | 0.069 (3) | 0.056 (2) | 0.055 (2) | 0.022 (2) | 0.029 (2) | 0.011 (2) |
| C13 | 0.050 (2) | 0.084 (3) | 0.049 (2) | 0.025 (2) | 0.0167 (19) | 0.016 (2) |
| C14 | 0.041 (2) | 0.070 (3) | 0.039 (2) | 0.0091 (19) | 0.0118 (17) | 0.0115 (19) |
| C15 | 0.039 (2) | 0.103 (4) | 0.059 (3) | −0.002 (2) | 0.008 (2) | 0.005 (3) |
| C16 | 0.051 (3) | 0.101 (4) | 0.067 (3) | −0.019 (3) | 0.004 (2) | −0.007 (3) |
| C17 | 0.064 (3) | 0.060 (3) | 0.069 (3) | −0.009 (2) | 0.011 (2) | −0.010 (2) |
| C18 | 0.046 (2) | 0.052 (2) | 0.046 (2) | −0.0025 (18) | 0.0120 (17) | 0.0017 (18) |
| C19 | 0.0399 (19) | 0.050 (2) | 0.0324 (18) | 0.0023 (17) | 0.0085 (15) | 0.0062 (16) |
| S—C6 | 1.709 (3) | C7—H7A | 0.9300 |
| S—C9 | 1.683 (4) | C8—C9 | 1.343 (5) |
| O—C10 | 1.370 (4) | C8—H8A | 0.9300 |
| O—C5 | 1.443 (4) | C9—H9A | 0.9300 |
| N—C2 | 1.440 (5) | C10—C11 | 1.360 (5) |
| N—C3 | 1.455 (5) | C10—C19 | 1.425 (5) |
| N—C1 | 1.462 (5) | C11—C12 | 1.419 (5) |
| C1—H1A | 0.9600 | C11—H11A | 0.9300 |
| C1—H1B | 0.9600 | C12—C13 | 1.357 (6) |
| C1—H1C | 0.9600 | C12—H12A | 0.9300 |
| C2—H2A | 0.9600 | C13—C14 | 1.400 (5) |
| C2—H2B | 0.9600 | C13—H13A | 0.9300 |
| C2—H2C | 0.9600 | C14—C15 | 1.406 (6) |
| C3—C4 | 1.517 (5) | C14—C19 | 1.429 (5) |
| C3—H3A | 0.9700 | C15—C16 | 1.345 (6) |
| C3—H3B | 0.9700 | C15—H15A | 0.9300 |
| C4—C5 | 1.511 (5) | C16—C17 | 1.390 (6) |
| C4—H4A | 0.9700 | C16—H16A | 0.9300 |
| C4—H4B | 0.9700 | C17—C18 | 1.369 (5) |
| C5—C6 | 1.513 (5) | C17—H17A | 0.9300 |
| C5—H5A | 0.9800 | C18—C19 | 1.405 (5) |
| C6—C7 | 1.410 (5) | C18—H18A | 0.9300 |
| C7—C8 | 1.435 (5) | ||
| C9—S—C6 | 91.74 (18) | C6—C7—H7A | 126.0 |
| C10—O—C5 | 119.6 (3) | C8—C7—H7A | 126.0 |
| C2—N—C3 | 111.4 (3) | C9—C8—C7 | 114.8 (3) |
| C2—N—C1 | 110.1 (3) | C9—C8—H8A | 122.6 |
| C3—N—C1 | 111.9 (3) | C7—C8—H8A | 122.6 |
| N—C1—H1A | 109.5 | C8—C9—S | 112.6 (3) |
| N—C1—H1B | 109.5 | C8—C9—H9A | 123.7 |
| H1A—C1—H1B | 109.5 | S—C9—H9A | 123.7 |
| N—C1—H1C | 109.5 | C11—C10—O | 125.2 (3) |
| H1A—C1—H1C | 109.5 | C11—C10—C19 | 121.4 (3) |
| H1B—C1—H1C | 109.5 | O—C10—C19 | 113.3 (3) |
| N—C2—H2A | 109.5 | C10—C11—C12 | 119.1 (4) |
| N—C2—H2B | 109.5 | C10—C11—H11A | 120.5 |
| H2A—C2—H2B | 109.5 | C12—C11—H11A | 120.5 |
| N—C2—H2C | 109.5 | C13—C12—C11 | 121.4 (4) |
| H2A—C2—H2C | 109.5 | C13—C12—H12A | 119.3 |
| H2B—C2—H2C | 109.5 | C11—C12—H12A | 119.3 |
| N—C3—C4 | 113.1 (3) | C12—C13—C14 | 120.6 (4) |
| N—C3—H3A | 109.0 | C12—C13—H13A | 119.7 |
| C4—C3—H3A | 109.0 | C14—C13—H13A | 119.7 |
| N—C3—H3B | 109.0 | C13—C14—C15 | 122.7 (4) |
| C4—C3—H3B | 109.0 | C13—C14—C19 | 119.4 (4) |
| H3A—C3—H3B | 107.8 | C15—C14—C19 | 117.8 (4) |
| C5—C4—C3 | 112.7 (3) | C16—C15—C14 | 121.8 (4) |
| C5—C4—H4A | 109.1 | C16—C15—H15A | 119.1 |
| C3—C4—H4A | 109.1 | C14—C15—H15A | 119.1 |
| C5—C4—H4B | 109.1 | C15—C16—C17 | 120.5 (4) |
| C3—C4—H4B | 109.1 | C15—C16—H16A | 119.8 |
| H4A—C4—H4B | 107.8 | C17—C16—H16A | 119.8 |
| O—C5—C4 | 106.5 (3) | C18—C17—C16 | 120.5 (4) |
| O—C5—C6 | 110.3 (3) | C18—C17—H17A | 119.8 |
| C4—C5—C6 | 112.7 (3) | C16—C17—H17A | 119.8 |
| O—C5—H5A | 109.1 | C17—C18—C19 | 120.4 (4) |
| C4—C5—H5A | 109.1 | C17—C18—H18A | 119.8 |
| C6—C5—H5A | 109.1 | C19—C18—H18A | 119.8 |
| C7—C6—C5 | 127.5 (3) | C18—C19—C10 | 122.9 (3) |
| C7—C6—S | 112.9 (3) | C18—C19—C14 | 119.0 (3) |
| C5—C6—S | 119.4 (3) | C10—C19—C14 | 118.1 (3) |
| C6—C7—C8 | 108.0 (3) | ||
| C2—N—C3—C4 | 161.7 (4) | C19—C10—C11—C12 | −0.9 (5) |
| C1—N—C3—C4 | −74.6 (4) | C10—C11—C12—C13 | 0.7 (6) |
| N—C3—C4—C5 | 176.9 (3) | C11—C12—C13—C14 | 0.2 (6) |
| C10—O—C5—C4 | −157.5 (3) | C12—C13—C14—C15 | 179.4 (4) |
| C10—O—C5—C6 | 80.0 (4) | C12—C13—C14—C19 | −1.0 (6) |
| C3—C4—C5—O | 53.6 (4) | C13—C14—C15—C16 | 178.9 (4) |
| C3—C4—C5—C6 | 174.6 (3) | C19—C14—C15—C16 | −0.8 (6) |
| O—C5—C6—C7 | −154.8 (3) | C14—C15—C16—C17 | 0.9 (7) |
| C4—C5—C6—C7 | 86.3 (4) | C15—C16—C17—C18 | −0.7 (7) |
| O—C5—C6—S | 30.0 (4) | C16—C17—C18—C19 | 0.4 (6) |
| C4—C5—C6—S | −88.8 (3) | C17—C18—C19—C10 | 179.7 (3) |
| C9—S—C6—C7 | 0.6 (3) | C17—C18—C19—C14 | −0.3 (5) |
| C9—S—C6—C5 | 176.4 (3) | C11—C10—C19—C18 | −179.9 (3) |
| C5—C6—C7—C8 | −176.3 (3) | O—C10—C19—C18 | −0.1 (5) |
| S—C6—C7—C8 | −0.8 (4) | C11—C10—C19—C14 | 0.2 (5) |
| C6—C7—C8—C9 | 0.7 (5) | O—C10—C19—C14 | 180.0 (3) |
| C7—C8—C9—S | −0.3 (4) | C13—C14—C19—C18 | −179.2 (3) |
| C6—S—C9—C8 | −0.2 (3) | C15—C14—C19—C18 | 0.5 (5) |
| C5—O—C10—C11 | −10.8 (5) | C13—C14—C19—C10 | 0.8 (5) |
| C5—O—C10—C19 | 169.4 (3) | C15—C14—C19—C10 | −179.6 (3) |
| O—C10—C11—C12 | 179.3 (3) |