Literature DB >> 21201561

(2-Methyl-1-phenyl-sulfonyl-1H-indol-3-yl)methanol.

G Chakkaravarthi, V Dhayalan, A K Mohanakrishnan, V Manivannan.   

Abstract

In the title compound, C(16)H(15)NO(3)S, the plane of the phenyl ring forms a dihedral angle of 80.37 (8)° with the indole ring system. The crystal packing is stabilized by weak O-H⋯O hydrogen bonds which link the mol-ecules into infinite chains along the a axis of the crystal.

Entities:  

Year:  2008        PMID: 21201561      PMCID: PMC2960400          DOI: 10.1107/S1600536808003024

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological activity, see: Nieto et al. (2005 ▶); Pomarnacka & Kozlarska-Kedra (2003 ▶). For the structure of closely related compounds, see: Chakkaravarthi et al. (2007 ▶); Liu et al. (2007 ▶).

Experimental

Crystal data

C16H15NO3S M = 301.35 Triclinic, a = 8.3780 (4) Å b = 9.6969 (5) Å c = 9.9630 (4) Å α = 78.718 (2)° β = 65.347 (3)° γ = 78.884 (2)° V = 715.77 (6) Å3 Z = 2 Mo Kα radiation μ = 0.23 mm−1 T = 295 (2) K 0.22 × 0.18 × 0.16 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.920, T max = 0.963 14857 measured reflections 4088 independent reflections 3267 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.241 S = 1.05 4088 reflections 191 parameters H-atom parameters constrained Δρmax = 0.43 e Å−3 Δρmin = −0.48 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808003024/ya2066sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003024/ya2066Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15NO3SZ = 2
Mr = 301.35F000 = 316
Triclinic, P1Dx = 1.398 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.3780 (4) ÅCell parameters from 8443 reflections
b = 9.6969 (5) Åθ = 2.7–26.2º
c = 9.9630 (4) ŵ = 0.23 mm1
α = 78.718 (2)ºT = 295 (2) K
β = 65.347 (3)ºBlock, colourless
γ = 78.884 (2)º0.22 × 0.18 × 0.16 mm
V = 715.77 (6) Å3
Bruker Kappa APEXII diffractometer4088 independent reflections
Radiation source: fine-focus sealed tube3267 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.021
T = 295(2) Kθmax = 30.0º
ω and φ scansθmin = 2.2º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.920, Tmax = 0.963k = −13→13
14857 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.058H-atom parameters constrained
wR(F2) = 0.241  w = 1/[σ2(Fo2) + (0.0931P)2 + 0.2366P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
4088 reflectionsΔρmax = 0.43 e Å3
191 parametersΔρmin = −0.48 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
xyzUiso*/Ueq
S10.70206 (7)0.26671 (6)0.24015 (6)0.0505 (2)
O10.7232 (3)0.1941 (2)0.1217 (2)0.0682 (6)
O20.5477 (2)0.3641 (2)0.2984 (3)0.0705 (6)
O31.1581 (6)0.5512 (4)0.3706 (4)0.1316 (14)
H31.26400.54500.35190.197*
N10.8742 (2)0.35733 (18)0.17689 (19)0.0434 (4)
C10.7297 (3)0.1424 (2)0.3853 (2)0.0464 (4)
C20.7397 (5)0.0001 (3)0.3817 (4)0.0705 (8)
H20.7350−0.03170.30130.085*
C30.7567 (6)−0.0952 (3)0.4989 (4)0.0831 (10)
H3A0.7620−0.19170.49820.100*
C40.7657 (4)−0.0484 (3)0.6162 (3)0.0709 (8)
H40.7779−0.11330.69460.085*
C50.7569 (5)0.0929 (3)0.6185 (3)0.0705 (8)
H50.76470.12360.69810.085*
C60.7364 (4)0.1917 (3)0.5037 (3)0.0594 (6)
H60.72750.28830.50640.071*
C70.8842 (3)0.4756 (2)0.2371 (2)0.0449 (4)
C81.0560 (3)0.4853 (2)0.2018 (2)0.0453 (4)
C91.1626 (3)0.3694 (2)0.1214 (2)0.0413 (4)
C101.3442 (3)0.3292 (3)0.0597 (3)0.0537 (5)
H101.42190.38250.06520.064*
C111.4065 (4)0.2092 (3)−0.0093 (3)0.0594 (6)
H111.52750.1794−0.04810.071*
C121.2929 (4)0.1321 (3)−0.0224 (3)0.0615 (6)
H121.33930.0523−0.07180.074*
C131.1125 (4)0.1701 (2)0.0358 (3)0.0525 (5)
H131.03630.11710.02770.063*
C141.0485 (3)0.2911 (2)0.1073 (2)0.0400 (4)
C150.7267 (4)0.5750 (3)0.3152 (3)0.0650 (7)
H15A0.66120.53030.41330.097*
H15B0.65250.59930.26010.097*
H15C0.76480.65940.32260.097*
C161.1300 (4)0.5945 (3)0.2393 (3)0.0649 (7)
H16A1.24130.61430.15800.078*
H16B1.04880.68160.24940.078*
U11U22U33U12U13U23
S10.0467 (3)0.0609 (4)0.0548 (4)−0.0134 (2)−0.0299 (3)−0.0024 (2)
O10.0776 (13)0.0891 (14)0.0633 (11)−0.0306 (11)−0.0455 (10)−0.0057 (10)
O20.0440 (9)0.0813 (13)0.0859 (14)−0.0033 (9)−0.0311 (9)−0.0021 (11)
O30.224 (4)0.128 (3)0.104 (2)−0.087 (3)−0.104 (2)0.0019 (19)
N10.0453 (9)0.0437 (8)0.0451 (9)−0.0082 (7)−0.0214 (7)−0.0037 (6)
C10.0469 (10)0.0499 (10)0.0458 (10)−0.0151 (8)−0.0192 (8)−0.0027 (8)
C20.100 (2)0.0570 (14)0.0674 (16)−0.0225 (14)−0.0387 (16)−0.0107 (12)
C30.122 (3)0.0477 (13)0.081 (2)−0.0179 (16)−0.043 (2)0.0014 (13)
C40.085 (2)0.0636 (15)0.0549 (14)−0.0142 (14)−0.0242 (13)0.0098 (11)
C50.094 (2)0.0730 (17)0.0455 (12)−0.0156 (15)−0.0283 (13)−0.0044 (11)
C60.0810 (17)0.0508 (12)0.0519 (12)−0.0122 (11)−0.0300 (12)−0.0066 (9)
C70.0538 (11)0.0378 (9)0.0425 (9)−0.0039 (8)−0.0198 (8)−0.0041 (7)
C80.0566 (12)0.0404 (9)0.0430 (9)−0.0100 (8)−0.0218 (9)−0.0055 (7)
C90.0468 (10)0.0430 (9)0.0384 (8)−0.0086 (7)−0.0207 (8)−0.0031 (7)
C100.0458 (11)0.0631 (13)0.0558 (12)−0.0105 (10)−0.0229 (10)−0.0058 (10)
C110.0522 (13)0.0661 (14)0.0540 (12)0.0030 (11)−0.0202 (10)−0.0070 (11)
C120.0697 (16)0.0582 (13)0.0569 (13)0.0096 (11)−0.0272 (12)−0.0205 (10)
C130.0667 (14)0.0486 (11)0.0529 (11)−0.0072 (10)−0.0307 (10)−0.0137 (9)
C140.0472 (10)0.0410 (9)0.0363 (8)−0.0073 (7)−0.0210 (7)−0.0023 (7)
C150.0632 (15)0.0511 (12)0.0709 (16)0.0048 (11)−0.0186 (12)−0.0157 (11)
C160.0821 (18)0.0538 (13)0.0680 (15)−0.0242 (13)−0.0294 (13)−0.0134 (11)
S1—O21.421 (2)C7—C81.350 (3)
S1—O11.422 (2)C7—C151.491 (3)
S1—N11.6619 (18)C8—C91.439 (3)
S1—C11.757 (2)C8—C161.499 (3)
O3—C161.396 (4)C9—C101.389 (3)
O3—H30.8200C9—C141.394 (3)
N1—C141.412 (3)C10—C111.371 (4)
N1—C71.425 (3)C10—H100.9300
C1—C21.373 (4)C11—C121.377 (4)
C1—C61.382 (3)C11—H110.9300
C2—C31.380 (4)C12—C131.377 (4)
C2—H20.9300C12—H120.9300
C3—C41.368 (5)C13—C141.391 (3)
C3—H3A0.9300C13—H130.9300
C4—C51.362 (5)C15—H15A0.9600
C4—H40.9300C15—H15B0.9600
C5—C61.388 (4)C15—H15C0.9600
C5—H50.9300C16—H16A0.9700
C6—H60.9300C16—H16B0.9700
O2—S1—O1119.32 (13)C7—C8—C16127.6 (2)
O2—S1—N1106.85 (11)C9—C8—C16123.9 (2)
O1—S1—N1106.16 (11)C10—C9—C14119.9 (2)
O2—S1—C1109.90 (12)C10—C9—C8132.5 (2)
O1—S1—C1109.10 (12)C14—C9—C8107.59 (18)
N1—S1—C1104.41 (9)C11—C10—C9118.6 (2)
C16—O3—H3109.5C11—C10—H10120.7
C14—N1—C7107.57 (17)C9—C10—H10120.7
C14—N1—S1120.92 (14)C10—C11—C12121.1 (2)
C7—N1—S1125.77 (15)C10—C11—H11119.4
C2—C1—C6121.3 (2)C12—C11—H11119.4
C2—C1—S1120.2 (2)C13—C12—C11121.6 (2)
C6—C1—S1118.42 (18)C13—C12—H12119.2
C1—C2—C3119.1 (3)C11—C12—H12119.2
C1—C2—H2120.4C12—C13—C14117.4 (2)
C3—C2—H2120.4C12—C13—H13121.3
C4—C3—C2120.4 (3)C14—C13—H13121.3
C4—C3—H3A119.8C13—C14—C9121.3 (2)
C2—C3—H3A119.8C13—C14—N1131.2 (2)
C5—C4—C3120.1 (3)C9—C14—N1107.57 (17)
C5—C4—H4119.9C7—C15—H15A109.5
C3—C4—H4119.9C7—C15—H15B109.5
C4—C5—C6120.9 (3)H15A—C15—H15B109.5
C4—C5—H5119.5C7—C15—H15C109.5
C6—C5—H5119.5H15A—C15—H15C109.5
C1—C6—C5118.1 (2)H15B—C15—H15C109.5
C1—C6—H6121.0O3—C16—C8112.6 (2)
C5—C6—H6121.0O3—C16—H16A109.1
C8—C7—N1108.74 (19)C8—C16—H16A109.1
C8—C7—C15127.7 (2)O3—C16—H16B109.1
N1—C7—C15123.4 (2)C8—C16—H16B109.1
C7—C8—C9108.49 (19)H16A—C16—H16B107.8
O2—S1—N1—C14−178.08 (15)C15—C7—C8—C9−177.5 (2)
O1—S1—N1—C14−49.73 (17)N1—C7—C8—C16178.9 (2)
C1—S1—N1—C1465.49 (17)C15—C7—C8—C163.4 (4)
O2—S1—N1—C732.0 (2)C7—C8—C9—C10180.0 (2)
O1—S1—N1—C7160.38 (18)C16—C8—C9—C10−0.9 (4)
C1—S1—N1—C7−84.39 (18)C7—C8—C9—C141.1 (2)
O2—S1—C1—C2123.0 (3)C16—C8—C9—C14−179.8 (2)
O1—S1—C1—C2−9.6 (3)C14—C9—C10—C11−2.3 (3)
N1—S1—C1—C2−122.7 (2)C8—C9—C10—C11178.9 (2)
O2—S1—C1—C6−55.4 (2)C9—C10—C11—C122.2 (4)
O1—S1—C1—C6172.0 (2)C10—C11—C12—C13−1.4 (4)
N1—S1—C1—C658.9 (2)C11—C12—C13—C140.7 (4)
C6—C1—C2—C30.0 (5)C12—C13—C14—C9−0.9 (3)
S1—C1—C2—C3−178.3 (3)C12—C13—C14—N1179.7 (2)
C1—C2—C3—C4−0.8 (6)C10—C9—C14—C131.8 (3)
C2—C3—C4—C50.4 (6)C8—C9—C14—C13−179.15 (18)
C3—C4—C5—C60.8 (5)C10—C9—C14—N1−178.74 (18)
C2—C1—C6—C51.1 (4)C8—C9—C14—N10.3 (2)
S1—C1—C6—C5179.5 (2)C7—N1—C14—C13177.9 (2)
C4—C5—C6—C1−1.6 (5)S1—N1—C14—C1323.2 (3)
C14—N1—C7—C82.2 (2)C7—N1—C14—C9−1.5 (2)
S1—N1—C7—C8155.38 (16)S1—N1—C14—C9−156.26 (14)
C14—N1—C7—C15178.0 (2)C7—C8—C16—O393.7 (4)
S1—N1—C7—C15−28.9 (3)C9—C8—C16—O3−85.2 (3)
N1—C7—C8—C9−2.0 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2i0.822.593.276 (5)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O2i0.822.593.276 (5)142

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Benzenesulfonamide analogs of fluoroquinolones. Antibacterial activity and QSAR studies.

Authors:  M J Nieto; F L Alovero; R H Manzo; Maria R Mazzieri
Journal:  Eur J Med Chem       Date:  2005-04       Impact factor: 6.514

3.  Synthesis of 1-(6-chloro-1,1-dioxo-1,4,2-benzodithiazin-3-yl)semi-carbazides and their transformation into 4-chloro-2-mercapto-N-(4,5-dihydro-5-oxo-4-phenyl-1H-1,2,4-triazol-3-yl)benzenesulfonamides as potential anticancer and anti-HIV agents.

Authors:  Elzbieta Pomarnacka; Iwona Kozlarska-Kedra
Journal:  Farmaco       Date:  2003-06
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  24 in total

1.  Diethyl 2-{[3-(2,4,6-trimethyl-benz-yl)-1-phenyl-sulfonyl-1H-indol-2-yl]methyl-idene}propane-dioate.

Authors:  B Saravanan; V Dhayalan; A K Mohanakrishnan; G Chakkaravarthi; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-29

2.  1-(Phenyl-sulfon-yl)benzo[1,2:2',3']thieno[5',4'-b]carbazole.

Authors:  S Thenmozhi; A Subbiahpandi; V Dhayalan; A K Mohanakrishnan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-27

3.  4-Bromo-meth-yl-1-phenyl-sulfon-yl-1H-indole.

Authors:  G Chakkaravarthi; Radhakrishnan Sureshbabu; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-29

4.  Ethyl 1,3-dimethyl-1H-indole-2-carboxyl-ate.

Authors:  A Marx; G Chakkaravarthi; G Gobirajeshwaran; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-25

5.  (2-Methyl-1-phenyl-sulfonyl-1H-indol-3-yl)phenyl-methyl acetate.

Authors:  B Saravanan; V Dhayalan; A K Mohanakrishnan; G Chakkaravarthi; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28

6.  2-Chloro-methyl-3-methyl-1-phenyl-sulfonyl-1H-indole.

Authors:  B Saravanan; V Dhayalan; A K Mohanakrishnan; G Chakkaravarthi; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-17

7.  7,9-Dimethyl-5-phenyl-sulfonyl-5H-benzo[b]carbazole.

Authors:  G Chakkaravarthi; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06

8.  9-Meth-oxy-5-phenyl-sulfonyl-5H-benzo[b]carbazole.

Authors:  G Chakkaravarthi; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06

9.  (Phen-yl)(1-phenyl-sulfonyl-1H-indol-3-yl)methanone.

Authors:  G Chakkaravarthi; R Panchatcharam; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-23

10.  Ethyl (2E,4E)-5-(3-bromo-phenyl-sulfon-yl)penta-2,4-dienoate.

Authors:  V Sabari; Ulaganathan Sankar; Ramakrishnan Uma; S Aravindhan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-06
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