Literature DB >> 21578328

2-Chloro-methyl-3-methyl-1-phenyl-sulfonyl-1H-indole.

B Saravanan, V Dhayalan, A K Mohanakrishnan, G Chakkaravarthi, V Manivannan.   

Abstract

In the title compound, C(16)H(14)ClNO(2)S, the phenyl ring makes a dihedral angle of 78.1 (1)° with the indole ring system. The mol-ecular structure is stabilized by weak intra-molecular C-H⋯O inter-actions. The crystal structure exhibits weak inter-molecular C-H⋯O, C-H⋯π and π-π [centroid-centroid distances = 3.620 (1)-3.794 (1) Å] inter-actions.

Entities:  

Year:  2009        PMID: 21578328      PMCID: PMC2970994          DOI: 10.1107/S1600536809041191

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of indole derivatives, see: Okabe & Adachi (1998 ▶); Schollmeyer et al. (1995 ▶). For related crystal structures, see: Chakkaravarthi et al. (2007 ▶, 2008 ▶).

Experimental

Crystal data

C16H14ClNO2S M = 319.79 Monoclinic, a = 7.9769 (6) Å b = 10.8064 (9) Å c = 17.3418 (12) Å β = 97.500 (2)° V = 1482.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.40 mm−1 T = 295 K 0.30 × 0.28 × 0.26 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (; Sheldrick, 1996 ▶) T min = 0.889, T max = 0.903 17616 measured reflections 3885 independent reflections 3201 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.120 S = 1.04 3885 reflections 191 parameters H-atom parameters constrained Δρmax = 0.59 e Å−3 Δρmin = −0.45 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809041191/is2470sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809041191/is2470Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H14ClNO2SF(000) = 664
Mr = 319.79Dx = 1.433 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 8432 reflections
a = 7.9769 (6) Åθ = 2.2–28.8°
b = 10.8064 (9) ŵ = 0.40 mm1
c = 17.3418 (12) ÅT = 295 K
β = 97.500 (2)°Block, colourless
V = 1482.1 (2) Å30.30 × 0.28 × 0.26 mm
Z = 4
Bruker Kappa APEXII diffractometer3885 independent reflections
Radiation source: fine-focus sealed tube3201 reflections with I > 2σ(I)
graphiteRint = 0.024
ω and φ scansθmax = 28.9°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.889, Tmax = 0.903k = −14→14
17616 measured reflectionsl = −13→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0606P)2 + 0.5623P] where P = (Fo2 + 2Fc2)/3
3885 reflections(Δ/σ)max < 0.001
191 parametersΔρmax = 0.59 e Å3
0 restraintsΔρmin = −0.45 e Å3
xyzUiso*/Ueq
C10.2222 (2)0.12567 (15)0.26775 (9)0.0376 (3)
C20.2156 (3)0.03299 (18)0.21251 (11)0.0510 (4)
H20.1172−0.01250.19890.061*
C30.3596 (3)0.0096 (2)0.17795 (12)0.0633 (6)
H30.3576−0.05190.14030.076*
C40.5042 (3)0.0757 (2)0.19847 (13)0.0602 (5)
H40.60060.05730.17580.072*
C50.5086 (3)0.1686 (2)0.25200 (12)0.0554 (5)
H50.60690.21450.26470.067*
C60.3671 (2)0.19466 (18)0.28736 (10)0.0460 (4)
H60.36950.25780.32390.055*
C70.1768 (2)0.16719 (15)0.47207 (10)0.0391 (3)
C80.2587 (2)0.08731 (16)0.52391 (9)0.0408 (4)
C90.2430 (2)−0.03433 (15)0.49110 (9)0.0371 (3)
C100.3019 (3)−0.14938 (18)0.51880 (11)0.0498 (4)
H100.3646−0.15680.56770.060*
C110.2658 (3)−0.25159 (18)0.47269 (13)0.0543 (5)
H110.3054−0.32880.49040.065*
C120.1713 (3)−0.24139 (17)0.40010 (12)0.0503 (4)
H120.1491−0.31210.37000.060*
C130.1090 (2)−0.12916 (16)0.37131 (10)0.0426 (4)
H130.0446−0.12290.32270.051*
C140.14676 (19)−0.02597 (15)0.41808 (9)0.0343 (3)
C150.1467 (3)0.29996 (17)0.48501 (12)0.0530 (5)
H15A0.13760.31300.53960.064*
H15B0.03980.32360.45550.064*
C160.3463 (3)0.1166 (2)0.60340 (11)0.0604 (5)
H16A0.33480.20330.61370.091*
H16B0.46400.09600.60620.091*
H16C0.29630.06940.64140.091*
N10.10231 (17)0.09922 (13)0.40560 (7)0.0370 (3)
O1−0.08880 (16)0.07654 (16)0.28192 (8)0.0602 (4)
O20.0208 (2)0.28227 (14)0.32369 (9)0.0621 (4)
S10.04580 (5)0.15288 (4)0.31625 (2)0.04245 (13)
Cl10.31210 (9)0.39887 (5)0.45712 (4)0.07026 (19)
U11U22U33U12U13U23
C10.0415 (8)0.0392 (8)0.0318 (7)0.0045 (6)0.0032 (6)0.0087 (6)
C20.0614 (11)0.0464 (10)0.0462 (9)−0.0100 (9)0.0108 (8)−0.0018 (8)
C30.0900 (16)0.0496 (12)0.0557 (12)−0.0003 (11)0.0294 (11)−0.0080 (9)
C40.0614 (12)0.0649 (13)0.0592 (12)0.0082 (10)0.0270 (10)0.0068 (10)
C50.0454 (9)0.0698 (14)0.0519 (10)−0.0043 (9)0.0090 (8)0.0039 (9)
C60.0467 (9)0.0519 (10)0.0389 (8)−0.0010 (8)0.0040 (7)−0.0004 (7)
C70.0465 (9)0.0336 (8)0.0401 (8)−0.0044 (7)0.0162 (7)−0.0023 (6)
C80.0469 (9)0.0415 (9)0.0347 (7)−0.0092 (7)0.0082 (6)−0.0005 (6)
C90.0391 (8)0.0374 (8)0.0349 (7)−0.0027 (6)0.0058 (6)0.0039 (6)
C100.0539 (10)0.0460 (10)0.0470 (9)0.0006 (8)−0.0025 (8)0.0117 (8)
C110.0630 (12)0.0355 (9)0.0649 (12)0.0069 (8)0.0097 (9)0.0094 (8)
C120.0585 (11)0.0359 (9)0.0579 (11)−0.0027 (8)0.0130 (9)−0.0072 (8)
C130.0474 (9)0.0413 (9)0.0392 (8)−0.0026 (7)0.0057 (7)−0.0033 (7)
C140.0355 (7)0.0338 (8)0.0344 (7)0.0006 (6)0.0081 (6)0.0029 (6)
C150.0683 (12)0.0373 (9)0.0588 (11)−0.0017 (9)0.0279 (9)−0.0040 (8)
C160.0773 (14)0.0624 (13)0.0397 (9)−0.0185 (11)0.0007 (9)−0.0052 (9)
N10.0423 (7)0.0337 (7)0.0354 (6)0.0033 (5)0.0070 (5)0.0039 (5)
O10.0372 (6)0.0834 (11)0.0567 (8)0.0000 (7)−0.0064 (6)0.0106 (7)
O20.0714 (10)0.0515 (9)0.0644 (9)0.0286 (7)0.0124 (7)0.0183 (7)
S10.0366 (2)0.0485 (3)0.0416 (2)0.01086 (17)0.00270 (15)0.01142 (17)
Cl10.0967 (4)0.0386 (3)0.0815 (4)−0.0169 (3)0.0344 (3)−0.0031 (2)
C1—C61.380 (3)C10—C111.372 (3)
C1—C21.382 (3)C10—H100.9300
C1—S11.7559 (17)C11—C121.385 (3)
C2—C31.387 (3)C11—H110.9300
C2—H20.9300C12—C131.379 (3)
C3—C41.364 (3)C12—H120.9300
C3—H30.9300C13—C141.389 (2)
C4—C51.365 (3)C13—H130.9300
C4—H40.9300C14—N11.408 (2)
C5—C61.382 (3)C15—Cl11.812 (2)
C5—H50.9300C15—H15A0.9700
C6—H60.9300C15—H15B0.9700
C7—C81.352 (2)C16—H16A0.9600
C7—N11.429 (2)C16—H16B0.9600
C7—C151.477 (2)C16—H16C0.9600
C8—C91.431 (2)N1—S11.6607 (13)
C8—C161.496 (2)O1—S11.4216 (15)
C9—C101.392 (2)O2—S11.4206 (15)
C9—C141.395 (2)
C6—C1—C2121.15 (17)C12—C11—H11119.5
C6—C1—S1119.29 (13)C13—C12—C11121.79 (18)
C2—C1—S1119.53 (14)C13—C12—H12119.1
C1—C2—C3118.21 (19)C11—C12—H12119.1
C1—C2—H2120.9C12—C13—C14117.02 (17)
C3—C2—H2120.9C12—C13—H13121.5
C4—C3—C2120.80 (19)C14—C13—H13121.5
C4—C3—H3119.6C13—C14—C9121.98 (15)
C2—C3—H3119.6C13—C14—N1130.59 (15)
C3—C4—C5120.56 (19)C9—C14—N1107.42 (13)
C3—C4—H4119.7C7—C15—Cl1113.22 (13)
C5—C4—H4119.7C7—C15—H15A108.9
C4—C5—C6120.1 (2)Cl1—C15—H15A108.9
C4—C5—H5119.9C7—C15—H15B108.9
C6—C5—H5119.9Cl1—C15—H15B108.9
C1—C6—C5119.14 (18)H15A—C15—H15B107.7
C1—C6—H6120.4C8—C16—H16A109.5
C5—C6—H6120.4C8—C16—H16B109.5
C8—C7—N1108.80 (14)H16A—C16—H16B109.5
C8—C7—C15126.40 (17)C8—C16—H16C109.5
N1—C7—C15124.29 (16)H16A—C16—H16C109.5
C7—C8—C9108.21 (15)H16B—C16—H16C109.5
C7—C8—C16127.22 (17)C14—N1—C7107.46 (13)
C9—C8—C16124.53 (17)C14—N1—S1120.74 (11)
C10—C9—C14119.47 (16)C7—N1—S1127.36 (12)
C10—C9—C8132.44 (16)O2—S1—O1120.13 (10)
C14—C9—C8108.08 (14)O2—S1—N1106.45 (8)
C11—C10—C9118.82 (17)O1—S1—N1106.64 (8)
C11—C10—H10120.6O2—S1—C1109.81 (9)
C9—C10—H10120.6O1—S1—C1108.11 (9)
C10—C11—C12120.91 (18)N1—S1—C1104.57 (7)
C10—C11—H11119.5
C6—C1—C2—C31.0 (3)C10—C9—C14—N1179.02 (15)
S1—C1—C2—C3−176.87 (15)C8—C9—C14—N1−0.22 (18)
C1—C2—C3—C40.5 (3)C8—C7—C15—Cl191.1 (2)
C2—C3—C4—C5−1.8 (4)N1—C7—C15—Cl1−98.03 (19)
C3—C4—C5—C61.6 (3)C13—C14—N1—C7−179.07 (16)
C2—C1—C6—C5−1.2 (3)C9—C14—N1—C71.18 (17)
S1—C1—C6—C5176.64 (15)C13—C14—N1—S1−21.1 (2)
C4—C5—C6—C1−0.1 (3)C9—C14—N1—S1159.16 (11)
N1—C7—C8—C91.60 (19)C8—C7—N1—C14−1.75 (17)
C15—C7—C8—C9173.60 (16)C15—C7—N1—C14−173.96 (15)
N1—C7—C8—C16−176.32 (18)C8—C7—N1—S1−157.84 (13)
C15—C7—C8—C16−4.3 (3)C15—C7—N1—S130.0 (2)
C7—C8—C9—C10−179.98 (19)C14—N1—S1—O2−176.12 (13)
C16—C8—C9—C10−2.0 (3)C7—N1—S1—O2−22.86 (16)
C7—C8—C9—C14−0.87 (19)C14—N1—S1—O154.50 (14)
C16—C8—C9—C14177.12 (17)C7—N1—S1—O1−152.24 (14)
C14—C9—C10—C111.1 (3)C14—N1—S1—C1−59.89 (14)
C8—C9—C10—C11−179.89 (19)C7—N1—S1—C193.37 (15)
C9—C10—C11—C12−0.6 (3)C6—C1—S1—O243.32 (16)
C10—C11—C12—C13−0.3 (3)C2—C1—S1—O2−138.81 (15)
C11—C12—C13—C140.6 (3)C6—C1—S1—O1176.10 (14)
C12—C13—C14—C9−0.1 (2)C2—C1—S1—O1−6.02 (17)
C12—C13—C14—N1−179.82 (17)C6—C1—S1—N1−70.55 (15)
C10—C9—C14—C13−0.8 (2)C2—C1—S1—N1107.33 (15)
C8—C9—C14—C13180.00 (15)
D—H···AD—HH···AD···AD—H···A
C2—H2···O10.932.512.886 (3)104
C13—H13···O10.932.473.033 (2)119
C15—H15B···O20.972.312.853 (3)114
C2—H2···O2i0.932.483.314 (2)149
C16—H16A···Cg2ii0.962.943.777 (2)146
C16—H16B···Cg3iii0.962.923.781 (3)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O10.932.512.886 (3)104
C13—H13⋯O10.932.473.033 (2)119
C15—H15B⋯O20.972.312.853 (3)114
C16—H16ACg2ii0.962.943.777 (2)146
C16—H16BCg3iii0.962.923.781 (3)149

Symmetry codes: (i) ; (ii) ; (iii) . Cg2 and Cg3 are the centroids of the C1–C6 and C9–C14 rings, respectively.

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Authors:  George M Sheldrick
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Authors:  G Chakkaravarthi; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-30

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