| Literature DB >> 21201169 |
Abstract
Two mol-ecules of the title compound, C(15)H(13)N(3)O(3)S, are linked by an inter-molecular N-H⋯S hydrogen bond. There is also an intra-molecular N-H⋯O hydrogen bond, forming a six-membered ring. The steric restriction of the m-methyl and p-nitro groups, as well as the intra-molecular hydrogen bond, are the main factors influencing the mol-ecular conformation.Entities:
Year: 2008 PMID: 21201169 PMCID: PMC2959244 DOI: 10.1107/S1600536808029425
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H13N3O3S | |
| Monoclinic, | Mo |
| Cell parameters from 2974 reflections | |
| θ = 2.7–29.0° | |
| µ = 0.24 mm−1 | |
| β = 108.012 (16)° | |
| Block, yellow | |
| 0.30 × 0.29 × 0.26 mm |
| Bruker APEXII CCD area-detector diffractometer | 2692 independent reflections |
| Radiation source: fine-focus sealed tube | 2072 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.5°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 2000) | |
| 7125 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2692 reflections | Δρmax = 0.29 e Å−3 |
| 201 parameters | Δρmin = −0.22 e Å−3 |
| 0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.038 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.16111 (5) | 0.07187 (6) | 0.10213 (3) | 0.0457 (2) | |
| C6 | −0.05997 (17) | 0.3452 (2) | −0.17937 (12) | 0.0385 (5) | |
| C8 | 0.14304 (16) | 0.2443 (2) | 0.05209 (11) | 0.0368 (5) | |
| N2 | 0.05371 (14) | 0.25694 (19) | −0.03121 (10) | 0.0395 (4) | |
| H2' | 0.0037 | 0.1792 | −0.0469 | 0.047* | |
| C9 | 0.30022 (17) | 0.3945 (2) | 0.16605 (12) | 0.0379 (5) | |
| C7 | 0.03499 (18) | 0.3776 (3) | −0.09162 (13) | 0.0413 (5) | |
| O3 | 0.09358 (15) | 0.4980 (2) | −0.07658 (10) | 0.0612 (5) | |
| N4 | 0.20710 (15) | 0.3727 (2) | 0.08184 (10) | 0.0416 (4) | |
| H4' | 0.1908 | 0.4522 | 0.0464 | 0.050* | |
| C10 | 0.28304 (18) | 0.3445 (3) | 0.24483 (12) | 0.0427 (5) | |
| H10 | 0.2111 | 0.2913 | 0.2433 | 0.051* | |
| N1 | −0.30000 (18) | 0.2241 (2) | −0.43126 (12) | 0.0545 (5) | |
| C3 | −0.21803 (18) | 0.2731 (2) | −0.34317 (12) | 0.0406 (5) | |
| C1 | −0.16868 (17) | 0.2707 (2) | −0.18569 (12) | 0.0391 (5) | |
| H1 | −0.1879 | 0.2449 | −0.1338 | 0.047* | |
| C2 | −0.24957 (18) | 0.2339 (2) | −0.26833 (13) | 0.0422 (5) | |
| H2 | −0.3239 | 0.1835 | −0.2733 | 0.051* | |
| C12 | 0.4762 (2) | 0.4543 (3) | 0.32628 (15) | 0.0544 (6) | |
| H12 | 0.5374 | 0.4737 | 0.3804 | 0.065* | |
| C11 | 0.37229 (19) | 0.3729 (3) | 0.32641 (13) | 0.0465 (5) | |
| C5 | −0.03345 (18) | 0.3910 (3) | −0.25606 (13) | 0.0465 (5) | |
| H5 | 0.0384 | 0.4468 | −0.2515 | 0.056* | |
| C4 | −0.11358 (19) | 0.3537 (3) | −0.33902 (13) | 0.0470 (5) | |
| H4 | −0.0967 | 0.3830 | −0.3912 | 0.056* | |
| C14 | 0.40313 (18) | 0.4767 (3) | 0.16660 (14) | 0.0479 (5) | |
| H14 | 0.4140 | 0.5118 | 0.1133 | 0.058* | |
| C13 | 0.49105 (19) | 0.5068 (3) | 0.24843 (16) | 0.0539 (6) | |
| H13 | 0.5613 | 0.5639 | 0.2501 | 0.065* | |
| O1 | −0.27911 (18) | 0.2717 (3) | −0.49730 (10) | 0.0787 (6) | |
| O2 | −0.38159 (19) | 0.1337 (3) | −0.43392 (12) | 0.0918 (7) | |
| C15 | 0.3541 (3) | 0.3154 (4) | 0.41178 (14) | 0.0725 (8) | |
| H15A | 0.3351 | 0.2057 | 0.4065 | 0.109* | |
| H15B | 0.2872 | 0.3715 | 0.4228 | 0.109* | |
| H15C | 0.4284 | 0.3321 | 0.4607 | 0.109* |
| S1 | 0.0441 (4) | 0.0420 (4) | 0.0431 (3) | 0.0008 (2) | 0.0017 (2) | 0.0030 (2) |
| C6 | 0.0384 (10) | 0.0398 (11) | 0.0356 (10) | 0.0041 (9) | 0.0088 (8) | 0.0034 (9) |
| C8 | 0.0325 (9) | 0.0458 (12) | 0.0321 (9) | 0.0017 (8) | 0.0100 (8) | −0.0033 (8) |
| N2 | 0.0390 (9) | 0.0397 (9) | 0.0346 (8) | −0.0011 (7) | 0.0039 (7) | 0.0009 (7) |
| C9 | 0.0325 (9) | 0.0403 (11) | 0.0369 (10) | 0.0032 (8) | 0.0050 (8) | −0.0037 (9) |
| C7 | 0.0398 (11) | 0.0424 (11) | 0.0392 (10) | −0.0006 (9) | 0.0083 (8) | 0.0004 (9) |
| O3 | 0.0644 (10) | 0.0559 (10) | 0.0488 (9) | −0.0186 (9) | −0.0035 (7) | 0.0098 (8) |
| N4 | 0.0423 (9) | 0.0412 (10) | 0.0357 (8) | −0.0034 (8) | 0.0038 (7) | 0.0016 (8) |
| C10 | 0.0379 (10) | 0.0470 (12) | 0.0408 (11) | −0.0010 (9) | 0.0086 (8) | −0.0046 (10) |
| N1 | 0.0497 (11) | 0.0658 (13) | 0.0411 (10) | 0.0018 (10) | 0.0036 (8) | −0.0009 (9) |
| C3 | 0.0378 (10) | 0.0457 (12) | 0.0339 (10) | 0.0052 (9) | 0.0045 (8) | −0.0005 (9) |
| C1 | 0.0433 (11) | 0.0407 (11) | 0.0342 (9) | 0.0019 (9) | 0.0134 (8) | 0.0035 (9) |
| C2 | 0.0349 (10) | 0.0448 (11) | 0.0458 (11) | 0.0011 (9) | 0.0108 (8) | 0.0029 (9) |
| C12 | 0.0398 (12) | 0.0633 (15) | 0.0474 (12) | 0.0050 (11) | −0.0051 (9) | −0.0084 (11) |
| C11 | 0.0470 (12) | 0.0497 (12) | 0.0379 (10) | 0.0091 (10) | 0.0058 (9) | −0.0015 (10) |
| C5 | 0.0362 (10) | 0.0610 (14) | 0.0415 (11) | −0.0053 (10) | 0.0110 (9) | 0.0039 (10) |
| C4 | 0.0450 (11) | 0.0609 (14) | 0.0365 (10) | 0.0010 (10) | 0.0145 (9) | 0.0052 (10) |
| C14 | 0.0391 (11) | 0.0546 (13) | 0.0490 (12) | 0.0009 (10) | 0.0120 (9) | 0.0014 (10) |
| C13 | 0.0313 (10) | 0.0620 (15) | 0.0617 (13) | −0.0068 (10) | 0.0046 (9) | −0.0052 (12) |
| O1 | 0.0929 (14) | 0.0997 (16) | 0.0343 (8) | −0.0134 (12) | 0.0062 (8) | 0.0072 (9) |
| O2 | 0.0754 (12) | 0.1309 (19) | 0.0583 (11) | −0.0485 (14) | 0.0046 (9) | −0.0138 (12) |
| C15 | 0.0825 (18) | 0.090 (2) | 0.0401 (12) | −0.0026 (16) | 0.0122 (12) | 0.0013 (13) |
| S1—C8 | 1.652 (3) | C3—C4 | 1.358 (3) |
| C6—C1 | 1.368 (3) | C3—C2 | 1.369 (3) |
| C6—C5 | 1.382 (3) | C1—C2 | 1.372 (3) |
| C6—C7 | 1.488 (3) | C1—H1 | 0.9300 |
| C8—N4 | 1.320 (3) | C2—H2 | 0.9300 |
| C8—N2 | 1.388 (2) | C12—C13 | 1.358 (4) |
| N2—C7 | 1.371 (3) | C12—C11 | 1.372 (3) |
| N2—H2' | 0.8600 | C12—H12 | 0.9300 |
| C9—C14 | 1.364 (3) | C11—C15 | 1.497 (3) |
| C9—C10 | 1.375 (3) | C5—C4 | 1.374 (3) |
| C9—N4 | 1.425 (3) | C5—H5 | 0.9300 |
| C7—O3 | 1.210 (3) | C4—H4 | 0.9300 |
| N4—H4' | 0.8600 | C14—C13 | 1.384 (3) |
| C10—C11 | 1.385 (3) | C14—H14 | 0.9300 |
| C10—H10 | 0.9300 | C13—H13 | 0.9300 |
| N1—O2 | 1.199 (3) | C15—H15A | 0.9600 |
| N1—O1 | 1.201 (3) | C15—H15B | 0.9600 |
| N1—C3 | 1.467 (3) | C15—H15C | 0.9600 |
| C1—C6—C5 | 120.32 (18) | C2—C1—H1 | 119.9 |
| C1—C6—C7 | 122.42 (18) | C3—C2—C1 | 118.3 (2) |
| C5—C6—C7 | 117.25 (19) | C3—C2—H2 | 120.9 |
| N4—C8—N2 | 115.52 (18) | C1—C2—H2 | 120.9 |
| N4—C8—S1 | 126.90 (15) | C13—C12—C11 | 121.0 (2) |
| N2—C8—S1 | 117.56 (15) | C13—C12—H12 | 119.5 |
| C7—N2—C8 | 128.27 (18) | C11—C12—H12 | 119.5 |
| C7—N2—H2' | 115.9 | C12—C11—C10 | 118.3 (2) |
| C8—N2—H2' | 115.9 | C12—C11—C15 | 121.7 (2) |
| C14—C9—C10 | 120.97 (18) | C10—C11—C15 | 120.1 (2) |
| C14—C9—N4 | 117.68 (18) | C4—C5—C6 | 119.7 (2) |
| C10—C9—N4 | 121.17 (19) | C4—C5—H5 | 120.1 |
| O3—C7—N2 | 123.19 (19) | C6—C5—H5 | 120.1 |
| O3—C7—C6 | 122.51 (19) | C3—C4—C5 | 118.59 (19) |
| N2—C7—C6 | 114.24 (18) | C3—C4—H4 | 120.7 |
| C8—N4—C9 | 127.32 (17) | C5—C4—H4 | 120.7 |
| C8—N4—H4' | 116.3 | C9—C14—C13 | 118.4 (2) |
| C9—N4—H4' | 116.3 | C9—C14—H14 | 120.8 |
| C9—C10—C11 | 120.3 (2) | C13—C14—H14 | 120.8 |
| C9—C10—H10 | 119.8 | C12—C13—C14 | 120.9 (2) |
| C11—C10—H10 | 119.8 | C12—C13—H13 | 119.5 |
| O2—N1—O1 | 123.1 (2) | C14—C13—H13 | 119.5 |
| O2—N1—C3 | 118.5 (2) | C11—C15—H15A | 109.5 |
| O1—N1—C3 | 118.3 (2) | C11—C15—H15B | 109.5 |
| C4—C3—C2 | 122.73 (18) | H15A—C15—H15B | 109.5 |
| C4—C3—N1 | 118.87 (18) | C11—C15—H15C | 109.5 |
| C2—C3—N1 | 118.4 (2) | H15A—C15—H15C | 109.5 |
| C6—C1—C2 | 120.21 (18) | H15B—C15—H15C | 109.5 |
| C6—C1—H1 | 119.9 | ||
| N4—C8—N2—C7 | 9.9 (3) | C5—C6—C1—C2 | 3.3 (3) |
| S1—C8—N2—C7 | −168.46 (16) | C7—C6—C1—C2 | −175.48 (19) |
| C8—N2—C7—O3 | −4.2 (3) | C4—C3—C2—C1 | −3.5 (3) |
| C8—N2—C7—C6 | 173.12 (17) | N1—C3—C2—C1 | 175.73 (18) |
| C1—C6—C7—O3 | −141.1 (2) | C6—C1—C2—C3 | 0.2 (3) |
| C5—C6—C7—O3 | 40.1 (3) | C13—C12—C11—C10 | 0.5 (3) |
| C1—C6—C7—N2 | 41.5 (3) | C13—C12—C11—C15 | −179.4 (2) |
| C5—C6—C7—N2 | −137.3 (2) | C9—C10—C11—C12 | 1.2 (3) |
| N2—C8—N4—C9 | 177.28 (17) | C9—C10—C11—C15 | −178.8 (2) |
| S1—C8—N4—C9 | −4.5 (3) | C1—C6—C5—C4 | −3.6 (3) |
| C14—C9—N4—C8 | 138.7 (2) | C7—C6—C5—C4 | 175.16 (19) |
| C10—C9—N4—C8 | −46.1 (3) | C2—C3—C4—C5 | 3.1 (3) |
| C14—C9—C10—C11 | −2.0 (3) | N1—C3—C4—C5 | −176.1 (2) |
| N4—C9—C10—C11 | −177.11 (18) | C6—C5—C4—C3 | 0.5 (3) |
| O2—N1—C3—C4 | 169.0 (2) | C10—C9—C14—C13 | 1.0 (3) |
| O1—N1—C3—C4 | −8.1 (3) | N4—C9—C14—C13 | 176.2 (2) |
| O2—N1—C3—C2 | −10.3 (3) | C11—C12—C13—C14 | −1.5 (4) |
| O1—N1—C3—C2 | 172.6 (2) | C9—C14—C13—C12 | 0.8 (4) |
| H··· | ||||
| N2—H2'···S1i | 0.86 | 2.81 | 3.665 (4) | 179. |
| N4—H4'···O3 | 0.86 | 1.94 | 2.643 (3) | 138. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2′⋯S1i | 0.86 | 2.81 | 3.665 (4) | 179 |
| N4—H4′⋯O3 | 0.86 | 1.94 | 2.643 (3) | 138 |
Symmetry code: (i) .