| Literature DB >> 21581237 |
Abstract
The title thio-urea mol-ecule, C(13)H(18)N(2)OS, adopts a folded conformation due to the steric hindrance of the two ethyl groups and the acetyl group. In the crystal structure, the acetyl O atom is not involved in hydrogen bonding, but inter-molecular N-H⋯S hydrogen bonds link the mol-ecules into centrosymmetric dimers.Entities:
Year: 2008 PMID: 21581237 PMCID: PMC2959839 DOI: 10.1107/S1600536808035290
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H18N2OS | |
| Monoclinic, | Mo |
| Cell parameters from 3844 reflections | |
| θ = 2.4–29.9º | |
| µ = 0.23 mm−1 | |
| β = 103.842 (10)º | |
| Block, colorless | |
| 0.30 × 0.29 × 0.25 mm |
| Bruker SMART CCD area-detector diffractometer | 3080 independent reflections |
| Radiation source: fine-focus sealed tube | 2484 reflections with |
| Monochromator: graphite | |
| θmax = 28.0º | |
| φ and ω scans | θmin = 1.8º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 2000) | |
| 7619 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 3080 reflections | Δρmax = 0.48 e Å−3 |
| 156 parameters | Δρmin = −0.37 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.61035 (14) | 0.09311 (14) | 0.9820 (2) | 0.0472 (4) | |
| H1 | 0.6752 | 0.0776 | 1.0607 | 0.057* | |
| C2 | 0.53176 (18) | 0.17042 (15) | 0.9993 (2) | 0.0570 (5) | |
| H2 | 0.5441 | 0.2071 | 1.0892 | 0.068* | |
| C3 | 0.43555 (19) | 0.19328 (17) | 0.8842 (3) | 0.0663 (6) | |
| H3 | 0.3821 | 0.2449 | 0.8962 | 0.080* | |
| C4 | 0.41832 (18) | 0.1398 (2) | 0.7515 (3) | 0.0716 (6) | |
| H4 | 0.3531 | 0.1552 | 0.6733 | 0.086* | |
| C5 | 0.49718 (16) | 0.06344 (17) | 0.7335 (2) | 0.0577 (5) | |
| H5 | 0.4856 | 0.0280 | 0.6426 | 0.069* | |
| C6 | 0.59380 (13) | 0.03890 (13) | 0.84970 (19) | 0.0406 (4) | |
| C7 | 0.67692 (14) | −0.04934 (13) | 0.8329 (2) | 0.0457 (4) | |
| H7A | 0.7249 | −0.0684 | 0.9311 | 0.055* | |
| H7B | 0.6303 | −0.1099 | 0.7909 | 0.055* | |
| C8 | 0.75749 (14) | −0.01928 (13) | 0.73300 (19) | 0.0426 (4) | |
| C9 | 0.95069 (13) | 0.06202 (11) | 0.73941 (17) | 0.0359 (3) | |
| C10 | 1.02328 (16) | 0.14815 (14) | 0.5447 (2) | 0.0488 (4) | |
| H10A | 0.9893 | 0.1590 | 0.4384 | 0.059* | |
| H10B | 1.0782 | 0.0899 | 0.5550 | 0.059* | |
| C11 | 1.0909 (2) | 0.24531 (17) | 0.6105 (3) | 0.0755 (6) | |
| H11A | 1.0370 | 0.3033 | 0.5999 | 0.113* | |
| H11B | 1.1517 | 0.2601 | 0.5583 | 0.113* | |
| H11C | 1.1268 | 0.2340 | 0.7149 | 0.113* | |
| C12 | 0.81587 (16) | 0.18024 (14) | 0.5634 (2) | 0.0491 (4) | |
| H12A | 0.8331 | 0.2545 | 0.5695 | 0.059* | |
| H12B | 0.7629 | 0.1657 | 0.6284 | 0.059* | |
| C13 | 0.75285 (19) | 0.15330 (19) | 0.4033 (2) | 0.0675 (6) | |
| H13A | 0.7990 | 0.1781 | 0.3363 | 0.101* | |
| H13B | 0.6759 | 0.1858 | 0.3788 | 0.101* | |
| H13C | 0.7438 | 0.0789 | 0.3935 | 0.101* | |
| N1 | 0.85660 (11) | 0.03650 (10) | 0.80451 (15) | 0.0398 (3) | |
| H1' | 0.8610 | 0.0570 | 0.8949 | 0.048* | |
| N2 | 0.92772 (11) | 0.12212 (10) | 0.61873 (14) | 0.0387 (3) | |
| O1 | 0.73627 (12) | −0.04082 (12) | 0.60141 (15) | 0.0640 (4) | |
| S1 | 1.08598 (3) | 0.01581 (4) | 0.82130 (5) | 0.04902 (16) |
| C1 | 0.0353 (8) | 0.0537 (9) | 0.0528 (10) | −0.0047 (7) | 0.0107 (7) | 0.0001 (8) |
| C2 | 0.0569 (11) | 0.0526 (10) | 0.0681 (12) | −0.0026 (8) | 0.0276 (9) | −0.0033 (9) |
| C3 | 0.0603 (12) | 0.0608 (11) | 0.0887 (16) | 0.0197 (10) | 0.0394 (11) | 0.0248 (11) |
| C4 | 0.0507 (11) | 0.0962 (16) | 0.0667 (13) | 0.0215 (11) | 0.0120 (10) | 0.0285 (12) |
| C5 | 0.0466 (10) | 0.0793 (13) | 0.0460 (10) | 0.0026 (9) | 0.0088 (8) | 0.0047 (9) |
| C6 | 0.0312 (7) | 0.0456 (8) | 0.0473 (9) | −0.0053 (6) | 0.0135 (6) | 0.0047 (7) |
| C7 | 0.0391 (8) | 0.0452 (8) | 0.0553 (10) | −0.0041 (7) | 0.0166 (7) | 0.0006 (7) |
| C8 | 0.0372 (8) | 0.0469 (8) | 0.0445 (9) | 0.0000 (7) | 0.0114 (7) | −0.0029 (7) |
| C9 | 0.0347 (7) | 0.0387 (7) | 0.0351 (7) | −0.0001 (6) | 0.0101 (6) | −0.0047 (6) |
| C10 | 0.0481 (9) | 0.0569 (10) | 0.0460 (9) | −0.0014 (8) | 0.0203 (7) | 0.0064 (8) |
| C11 | 0.0678 (13) | 0.0557 (11) | 0.1072 (19) | −0.0136 (10) | 0.0293 (13) | 0.0072 (12) |
| C12 | 0.0502 (9) | 0.0500 (9) | 0.0473 (9) | 0.0154 (7) | 0.0124 (7) | 0.0034 (7) |
| C13 | 0.0625 (12) | 0.0880 (15) | 0.0467 (10) | 0.0285 (11) | 0.0026 (9) | 0.0024 (10) |
| N1 | 0.0344 (6) | 0.0527 (8) | 0.0340 (6) | −0.0010 (5) | 0.0115 (5) | −0.0037 (6) |
| N2 | 0.0375 (7) | 0.0411 (7) | 0.0386 (7) | 0.0032 (5) | 0.0115 (5) | −0.0004 (5) |
| O1 | 0.0590 (8) | 0.0866 (10) | 0.0472 (8) | −0.0209 (7) | 0.0143 (6) | −0.0180 (7) |
| S1 | 0.0346 (2) | 0.0687 (3) | 0.0442 (3) | 0.00839 (18) | 0.01022 (17) | 0.00658 (19) |
| C1—C6 | 1.371 (2) | C9—N1 | 1.401 (2) |
| C1—C2 | 1.379 (3) | C9—S1 | 1.6747 (17) |
| C1—H1 | 0.9300 | C10—N2 | 1.469 (2) |
| C2—C3 | 1.371 (3) | C10—C11 | 1.516 (3) |
| C2—H2 | 0.9300 | C10—H10A | 0.9700 |
| C3—C4 | 1.370 (4) | C10—H10B | 0.9700 |
| C3—H3 | 0.9300 | C11—H11A | 0.9600 |
| C4—C5 | 1.374 (3) | C11—H11B | 0.9600 |
| C4—H4 | 0.9300 | C11—H11C | 0.9600 |
| C5—C6 | 1.384 (2) | C12—N2 | 1.474 (2) |
| C5—H5 | 0.9300 | C12—C13 | 1.515 (3) |
| C6—C7 | 1.516 (2) | C12—H12A | 0.9700 |
| C7—C8 | 1.506 (2) | C12—H12B | 0.9700 |
| C7—H7A | 0.9700 | C13—H13A | 0.9600 |
| C7—H7B | 0.9700 | C13—H13B | 0.9600 |
| C8—O1 | 1.205 (2) | C13—H13C | 0.9600 |
| C8—N1 | 1.377 (2) | N1—H1' | 0.8600 |
| C9—N2 | 1.322 (2) | ||
| C6—C1—C2 | 120.61 (17) | N2—C10—C11 | 112.09 (16) |
| C6—C1—H1 | 119.7 | N2—C10—H10A | 109.2 |
| C2—C1—H1 | 119.7 | C11—C10—H10A | 109.2 |
| C3—C2—C1 | 120.1 (2) | N2—C10—H10B | 109.2 |
| C3—C2—H2 | 120.0 | C11—C10—H10B | 109.2 |
| C1—C2—H2 | 120.0 | H10A—C10—H10B | 107.9 |
| C4—C3—C2 | 119.81 (19) | C10—C11—H11A | 109.5 |
| C4—C3—H3 | 120.1 | C10—C11—H11B | 109.5 |
| C2—C3—H3 | 120.1 | H11A—C11—H11B | 109.5 |
| C3—C4—C5 | 120.2 (2) | C10—C11—H11C | 109.5 |
| C3—C4—H4 | 119.9 | H11A—C11—H11C | 109.5 |
| C5—C4—H4 | 119.9 | H11B—C11—H11C | 109.5 |
| C4—C5—C6 | 120.4 (2) | N2—C12—C13 | 113.49 (14) |
| C4—C5—H5 | 119.8 | N2—C12—H12A | 108.9 |
| C6—C5—H5 | 119.8 | C13—C12—H12A | 108.9 |
| C1—C6—C5 | 118.89 (17) | N2—C12—H12B | 108.9 |
| C1—C6—C7 | 120.65 (15) | C13—C12—H12B | 108.9 |
| C5—C6—C7 | 120.42 (17) | H12A—C12—H12B | 107.7 |
| C8—C7—C6 | 111.86 (14) | C12—C13—H13A | 109.5 |
| C8—C7—H7A | 109.2 | C12—C13—H13B | 109.5 |
| C6—C7—H7A | 109.2 | H13A—C13—H13B | 109.5 |
| C8—C7—H7B | 109.2 | C12—C13—H13C | 109.5 |
| C6—C7—H7B | 109.2 | H13A—C13—H13C | 109.5 |
| H7A—C7—H7B | 107.9 | H13B—C13—H13C | 109.5 |
| O1—C8—N1 | 122.88 (15) | C8—N1—C9 | 124.21 (14) |
| O1—C8—C7 | 122.95 (16) | C8—N1—H1' | 117.9 |
| N1—C8—C7 | 114.16 (15) | C9—N1—H1' | 117.9 |
| N2—C9—N1 | 118.15 (13) | C9—N2—C10 | 119.78 (13) |
| N2—C9—S1 | 124.09 (12) | C9—N2—C12 | 124.49 (13) |
| N1—C9—S1 | 117.75 (12) | C10—N2—C12 | 115.02 (14) |
| C6—C1—C2—C3 | 0.4 (3) | O1—C8—N1—C9 | −8.9 (3) |
| C1—C2—C3—C4 | −0.6 (3) | C7—C8—N1—C9 | 172.09 (14) |
| C2—C3—C4—C5 | 0.0 (3) | N2—C9—N1—C8 | 62.2 (2) |
| C3—C4—C5—C6 | 0.8 (3) | S1—C9—N1—C8 | −118.74 (15) |
| C2—C1—C6—C5 | 0.4 (2) | N1—C9—N2—C10 | −178.25 (14) |
| C2—C1—C6—C7 | −177.23 (15) | S1—C9—N2—C10 | 2.7 (2) |
| C4—C5—C6—C1 | −1.0 (3) | N1—C9—N2—C12 | 11.9 (2) |
| C4—C5—C6—C7 | 176.60 (17) | S1—C9—N2—C12 | −167.16 (12) |
| C1—C6—C7—C8 | −107.78 (18) | C11—C10—N2—C9 | −88.3 (2) |
| C5—C6—C7—C8 | 74.7 (2) | C11—C10—N2—C12 | 82.5 (2) |
| C6—C7—C8—O1 | −96.5 (2) | C13—C12—N2—C9 | −122.62 (19) |
| C6—C7—C8—N1 | 82.50 (18) | C13—C12—N2—C10 | 67.1 (2) |
| H··· | ||||
| N1—H1'···S1i | 0.86 | 2.69 | 3.404 (3) | 141 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1′⋯S1i | 0.86 | 2.69 | 3.404 (3) | 141 |
Symmetry code: (i) .