Literature DB >> 21201005

Bis(2-amino-4-methyl-1,3-thia-zole-κN)dichloridocadmium(II).

Lai-Jun Zhang, Xing-Can Shen, Hong Liang.   

Abstract

In the title compound, [CdCl(2)(C(4)H(6)N(2)S)(2)], the Cd(II) atom is coordinated by two chlorido ligands and two N atoms of the 2-amino-5-methyl-1,3-thia-zole (amtz) ligands in a slightly distorted tetra-hedral coordination geometry. Intra- and inter-molecular N-H⋯Cl hydrogen bonding stabilizes the crystal structure. A weak S⋯Cl inter-action [3.533 (2) Å] is observed between neighboring mol-ecules.

Entities:  

Year:  2008        PMID: 21201005      PMCID: PMC2959461          DOI: 10.1107/S1600536808027864

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Bolos et al. (1999 ▶); Miodragović et al. (2006 ▶); Cini et al. (2007 ▶); Dea et al. (2008 ▶); Shen et al. (2008 ▶). For a related structure, see: Cai et al. (2008 ▶).

Experimental

Crystal data

[CdCl2(C4H6N2S)2] M = 411.67 Monoclinic, a = 8.7100 (17) Å b = 13.190 (3) Å c = 12.740 (3) Å β = 95.19 (3)° V = 1457.6 (6) Å3 Z = 4 Mo Kα radiation μ = 2.13 mm−1 T = 293 (2) K 0.40 × 0.25 × 0.23 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.442, T max = 0.612 7630 measured reflections 2595 independent reflections 2113 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.064 S = 0.98 2595 reflections 156 parameters H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808027864/xu2449sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808027864/xu2449Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CdCl2(C4H6N2S)2]F(000) = 808
Mr = 411.67Dx = 1.885 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2595 reflections
a = 8.7100 (17) Åθ = 2.2–25.1°
b = 13.190 (3) ŵ = 2.14 mm1
c = 12.740 (3) ÅT = 293 K
β = 95.19 (3)°Block, brown-yellow
V = 1457.6 (6) Å30.40 × 0.25 × 0.23 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2595 independent reflections
Radiation source: fine-focus sealed tube2113 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 25.1°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→10
Tmin = 0.442, Tmax = 0.612k = −15→15
7630 measured reflectionsl = −15→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.064H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0309P)2 + 0.4982P] where P = (Fo2 + 2Fc2)/3
2595 reflections(Δ/σ)max < 0.001
156 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.39 e Å3
Experimental. IR (KBr, cm-1): 3431s, 3861s, 3305s, 3205ms, 3133w, 3100w, 2978w, 2947w, 2913w, 2713w, 2346w, 1621vs, 1561m, 1506s, 1438ms, 1380ms, 1357s, 1147m, 1112s, 1033m, 843w, 738m, 703m, 637m, 606m, 478m.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.79522 (3)0.902858 (19)0.78981 (2)0.04161 (10)
C10.6219 (4)0.7247 (3)0.6506 (3)0.0454 (9)
C20.8598 (4)0.7492 (3)0.6053 (3)0.0468 (9)
C30.4937 (4)1.0397 (3)0.7472 (3)0.0510 (9)
C40.6202 (4)0.6597 (3)0.5703 (3)0.0535 (10)
H40.53680.61870.54800.064*
C50.6514 (5)1.0670 (3)0.6215 (3)0.0621 (11)
C60.5336 (7)1.1274 (4)0.5873 (4)0.0879 (16)
H60.53191.16670.52670.105*
C70.7954 (6)1.0484 (4)0.5704 (4)0.0891 (16)
H7A0.79251.08600.50570.134*
H7B0.80430.97740.55570.134*
H7C0.88241.06980.61670.134*
C80.4931 (4)0.7448 (3)0.7171 (3)0.0659 (12)
H8A0.41010.69850.69830.099*
H8B0.45730.81320.70580.099*
H8C0.52880.73590.79000.099*
Cl11.06487 (10)0.94872 (8)0.79854 (9)0.0612 (3)
Cl20.71199 (11)0.86235 (8)0.96262 (7)0.0551 (3)
N10.6277 (3)1.0170 (2)0.7149 (2)0.0443 (7)
N20.7612 (3)0.7769 (2)0.6713 (2)0.0427 (7)
N30.4407 (3)1.0036 (3)0.8341 (3)0.0649 (9)
H3A0.49570.96200.87350.078*
H3B0.35121.02160.85090.078*
N41.0026 (4)0.7866 (3)0.6046 (3)0.0710 (11)
H4A1.03480.83210.64970.085*
H4B1.06210.76510.55910.085*
S10.38830 (17)1.12403 (11)0.66679 (12)0.0917 (4)
S20.79042 (12)0.66122 (8)0.51342 (8)0.0607 (3)
U11U22U33U12U13U23
Cd10.03346 (15)0.04928 (17)0.04276 (17)−0.00234 (11)0.00714 (11)−0.00173 (12)
C10.041 (2)0.041 (2)0.052 (2)−0.0037 (16)−0.0011 (17)0.0042 (18)
C20.050 (2)0.043 (2)0.048 (2)−0.0025 (17)0.0102 (17)−0.0039 (17)
C30.043 (2)0.047 (2)0.062 (3)0.0040 (17)−0.0009 (19)−0.0053 (19)
C40.048 (2)0.048 (2)0.062 (3)−0.0031 (18)−0.0063 (19)−0.007 (2)
C50.080 (3)0.049 (2)0.056 (3)−0.008 (2)0.002 (2)0.012 (2)
C60.118 (4)0.069 (3)0.072 (3)0.009 (3)−0.013 (3)0.030 (3)
C70.104 (4)0.099 (4)0.070 (3)−0.008 (3)0.034 (3)0.026 (3)
C80.045 (2)0.075 (3)0.079 (3)−0.014 (2)0.015 (2)−0.011 (2)
Cl10.0355 (5)0.0727 (7)0.0757 (7)−0.0109 (5)0.0062 (5)−0.0115 (6)
Cl20.0497 (5)0.0708 (6)0.0466 (5)0.0022 (5)0.0140 (4)0.0077 (5)
N10.0445 (17)0.0412 (17)0.0470 (18)−0.0030 (14)0.0030 (14)0.0039 (14)
N20.0429 (16)0.0425 (16)0.0436 (16)−0.0034 (13)0.0084 (13)−0.0036 (14)
N30.0409 (18)0.083 (2)0.073 (2)0.0146 (17)0.0172 (17)0.008 (2)
N40.059 (2)0.078 (2)0.081 (3)−0.0172 (19)0.0366 (19)−0.028 (2)
S10.0823 (9)0.0895 (9)0.1004 (11)0.0353 (7)−0.0071 (8)0.0189 (8)
S20.0642 (7)0.0591 (6)0.0589 (7)0.0000 (5)0.0061 (5)−0.0178 (5)
Cd1—N22.246 (3)C5—C61.340 (6)
Cd1—N12.248 (3)C5—N11.392 (5)
Cd1—Cl12.4181 (10)C5—C71.485 (6)
Cd1—Cl22.4387 (11)C6—S11.691 (6)
C1—C41.333 (5)C6—H60.9300
C1—N21.399 (4)C7—H7A0.9600
C1—C81.490 (5)C7—H7B0.9600
C2—N21.308 (4)C7—H7C0.9600
C2—N41.338 (4)C8—H8A0.9600
C2—S21.718 (4)C8—H8B0.9600
C3—N11.308 (4)C8—H8C0.9600
C3—N31.326 (5)N3—H3A0.8600
C3—S11.720 (4)N3—H3B0.8600
C4—S21.708 (4)N4—H4A0.8600
C4—H40.9300N4—H4B0.8600
N2—Cd1—N199.70 (11)C5—C7—H7B109.5
N2—Cd1—Cl1106.53 (8)H7A—C7—H7B109.5
N1—Cd1—Cl1116.26 (8)C5—C7—H7C109.5
N2—Cd1—Cl2114.38 (8)H7A—C7—H7C109.5
N1—Cd1—Cl2107.19 (8)H7B—C7—H7C109.5
Cl1—Cd1—Cl2112.34 (4)C1—C8—H8A109.5
C4—C1—N2114.2 (3)C1—C8—H8B109.5
C4—C1—C8126.5 (3)H8A—C8—H8B109.5
N2—C1—C8119.3 (3)C1—C8—H8C109.5
N2—C2—N4124.4 (3)H8A—C8—H8C109.5
N2—C2—S2114.6 (3)H8B—C8—H8C109.5
N4—C2—S2121.0 (3)C3—N1—C5111.5 (3)
N1—C3—N3124.6 (3)C3—N1—Cd1125.7 (3)
N1—C3—S1113.8 (3)C5—N1—Cd1122.7 (3)
N3—C3—S1121.5 (3)C2—N2—C1110.4 (3)
C1—C4—S2111.6 (3)C2—N2—Cd1125.8 (2)
C1—C4—H4124.2C1—N2—Cd1123.4 (2)
S2—C4—H4124.2C3—N3—H3A120.0
C6—C5—N1113.0 (4)C3—N3—H3B120.0
C6—C5—C7127.4 (4)H3A—N3—H3B120.0
N1—C5—C7119.5 (4)C2—N4—H4A120.0
C5—C6—S1112.5 (4)C2—N4—H4B120.0
C5—C6—H6123.8H4A—N4—H4B120.0
S1—C6—H6123.8C6—S1—C389.2 (2)
C5—C7—H7A109.5C4—S2—C289.09 (18)
D—H···AD—HH···AD···AD—H···A
N3—H3A···Cl20.862.493.322 (4)164.
N3—H3B···Cl1i0.862.703.343 (3)133.
N4—H4A···Cl10.862.443.276 (4)165.
N4—H4B···Cl2ii0.862.523.325 (3)157.
Cd1—N22.246 (3)
Cd1—N12.248 (3)
Cd1—Cl12.4181 (10)
Cd1—Cl22.4387 (11)
N2—Cd1—N199.70 (11)
N2—Cd1—Cl1106.53 (8)
N1—Cd1—Cl1116.26 (8)
N2—Cd1—Cl2114.38 (8)
N1—Cd1—Cl2107.19 (8)
Cl1—Cd1—Cl2112.34 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯Cl20.862.493.322 (4)164
N3—H3B⋯Cl1i0.862.703.343 (3)133
N4—H4A⋯Cl10.862.443.276 (4)165
N4—H4B⋯Cl2ii0.862.523.325 (3)157

Symmetry codes: (i) ; (ii) .

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