Literature DB >> 21578564

Bis(2-amino-thia-zole-4-acetato)aquazinc(II).

Lai-Jun Zhang, Xing-Can Shen, Yan Yang, Hong Liang.   

Abstract

In the title compound, [Zn(C(5)H(5)N(2)O(2)S)(2)(H(2)O)], the central Zn atom (2 site symmetry) is five-coordinated by two N and three O atoms [Zn-N = 2.047 (3) Å, Zn-O = 2.099 (2) and 1.974 (4) Å] in a distorted square-pyramidal geometry. Besides one O atom from a water mol-ecule, two 2-amino-thia-zole-4-acetate ligands provide two N and two O atoms as coordinated atoms. In the crystal structure, inter-molecular O-H⋯O and N-H⋯O hydrogen bonds connect the mol-ecules into an infinite three-dimensional framework.

Entities:  

Year:  2009        PMID: 21578564      PMCID: PMC2971890          DOI: 10.1107/S1600536809045589

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of potential metal-based drugs consisting of the thia­zole ligands and some physiologically active metal ions, see: Addison et al. (1984 ▶); Bolos et al. (1999 ▶); Chang et al. (1982 ▶); Dea et al. (2008 ▶). For related structures, see: Zhang et al. (2008a ▶,b ▶); Sen et al. (1997 ▶).

Experimental

Crystal data

[Zn(C5H5N2O2S)2(H2O)] M = 397.77 Monoclinic, a = 11.715 (2) Å b = 9.822 (2) Å c = 12.580 (3) Å β = 91.24 (3)° V = 1447.2 (5) Å3 Z = 4 Mo Kα radiation μ = 2.01 mm−1 T = 295 K 0.12 × 0.10 × 0.08 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.794, T max = 0.856 4633 measured reflections 1742 independent reflections 1214 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.101 S = 1.02 1742 reflections 101 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.43 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT-Plus (Bruker, 2005 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045589/rk2177sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045589/rk2177Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C5H5N2O2S)2(H2O)]F(000) = 808
Mr = 397.77Dx = 1.826 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1742 reflections
a = 11.715 (2) Åθ = 2.7–25.5°
b = 9.822 (2) ŵ = 2.01 mm1
c = 12.580 (3) ÅT = 295 K
β = 91.24 (3)°Block, colourless
V = 1447.2 (5) Å30.12 × 0.10 × 0.08 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer1742 independent reflections
Radiation source: fine-focus sealed tube1214 reflections with I > 2σ(I)
graphiteRint = 0.042
φ and ω scansθmax = 28.3°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −15→9
Tmin = 0.794, Tmax = 0.856k = −10→12
4633 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.046P)2] where P = (Fo2 + 2Fc2)/3
1742 reflections(Δ/σ)max < 0.001
101 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.50000.77073 (6)0.25000.03185 (19)
S10.42899 (9)0.81081 (12)0.60112 (7)0.0498 (3)
O10.32429 (19)0.7822 (3)0.21472 (18)0.0392 (6)
O20.16766 (19)0.9045 (3)0.19131 (17)0.0411 (6)
O30.50000.5698 (4)0.25000.0499 (10)
H30.55510.52410.22530.075*
N10.4607 (2)0.8338 (3)0.3999 (2)0.0329 (7)
N20.6077 (3)0.7192 (4)0.4935 (2)0.0536 (9)
H1A0.64590.70730.43660.064*
H1B0.63400.68930.55340.064*
C50.2579 (3)0.8773 (4)0.2413 (2)0.0302 (8)
C10.5089 (3)0.7835 (4)0.4888 (3)0.0382 (8)
C30.3572 (3)0.8988 (4)0.4224 (3)0.0349 (8)
C20.3275 (3)0.8960 (4)0.5241 (3)0.0432 (9)
H20.26120.93460.55020.052*
C40.2909 (3)0.9663 (4)0.3346 (3)0.0417 (9)
H4A0.33551.04200.30870.050*
H4B0.22171.00370.36400.050*
U11U22U33U12U13U23
Zn10.0295 (3)0.0373 (4)0.0286 (3)0.000−0.0023 (2)0.000
S10.0541 (7)0.0690 (8)0.0262 (5)−0.0060 (5)−0.0011 (4)0.0010 (4)
O10.0309 (13)0.0479 (16)0.0384 (14)0.0085 (11)−0.0078 (11)−0.0132 (12)
O20.0339 (14)0.0525 (17)0.0365 (14)0.0091 (11)−0.0070 (11)−0.0076 (12)
O30.031 (2)0.034 (2)0.085 (3)0.0000.0120 (18)0.000
N10.0329 (16)0.0388 (18)0.0266 (14)0.0008 (13)−0.0058 (12)0.0007 (12)
N20.049 (2)0.075 (3)0.0363 (18)0.0228 (18)−0.0075 (15)0.0126 (17)
C50.0248 (17)0.039 (2)0.0272 (17)−0.0004 (14)−0.0009 (13)0.0011 (14)
C10.044 (2)0.043 (2)0.0274 (18)−0.0075 (17)−0.0048 (15)0.0016 (15)
C30.0353 (19)0.036 (2)0.0331 (19)−0.0005 (15)−0.0062 (14)−0.0086 (15)
C20.039 (2)0.054 (3)0.037 (2)−0.0001 (18)−0.0008 (16)−0.0158 (17)
C40.041 (2)0.042 (2)0.042 (2)0.0084 (16)−0.0086 (16)−0.0108 (17)
Zn1—O31.974 (4)N1—C31.404 (4)
Zn1—N12.047 (3)N2—C11.319 (5)
Zn1—N1i2.047 (3)N2—H1A0.8600
Zn1—O1i2.099 (2)N2—H1B0.8600
Zn1—O12.099 (2)C5—C41.507 (5)
S1—C11.733 (4)C3—C21.335 (4)
S1—C21.733 (4)C3—C41.492 (5)
O1—C51.266 (4)C2—H20.9300
O2—C51.247 (3)C4—H4A0.9700
O3—H30.8500C4—H4B0.9700
N1—C11.336 (4)
O3—Zn1—N1107.61 (8)H1A—N2—H1B120.0
O3—Zn1—N1i107.61 (8)O2—C5—O1122.9 (3)
N1—Zn1—N1i144.78 (17)O2—C5—C4118.0 (3)
O3—Zn1—O1i93.07 (7)O1—C5—C4119.0 (3)
N1—Zn1—O1i91.60 (10)N2—C1—N1124.7 (3)
N1i—Zn1—O1i86.54 (10)N2—C1—S1121.8 (3)
O3—Zn1—O193.07 (7)N1—C1—S1113.6 (3)
N1—Zn1—O186.54 (10)C2—C3—N1115.4 (3)
N1i—Zn1—O191.60 (10)C2—C3—C4125.2 (3)
O1i—Zn1—O1173.87 (14)N1—C3—C4119.5 (3)
C1—S1—C289.73 (17)C3—C2—S1110.8 (3)
C5—O1—Zn1126.1 (2)C3—C2—H2124.6
Zn1—O3—H3121.8S1—C2—H2124.6
H3—O3—H3i116.3C3—C4—C5116.1 (3)
C1—N1—C3110.5 (3)C3—C4—H4A108.3
C1—N1—Zn1124.0 (3)C5—C4—H4A108.3
C3—N1—Zn1122.4 (2)C3—C4—H4B108.3
C1—N2—H1A120.0C5—C4—H4B108.3
C1—N2—H1B120.0H4A—C4—H4B107.4
D—H···AD—HH···AD···AD—H···A
O3—H3···O2ii0.851.822.664 (3)170
N2—H1A···O1i0.862.082.822 (4)145
N2—H1B···O2iii0.862.002.844 (4)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3⋯O2i 0.851.822.664 (3)170
N2—H1A⋯O1ii 0.862.082.822 (4)145
N2—H1B⋯O2iii 0.862.002.844 (4)169

Symmetry codes: (i) ; (ii) ; (iii) .

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