Literature DB >> 21203006

Dichloridobis(3,5-dimethyl-1H-pyrazol-4-amine-κN)cobalt(II).

Xing-Wei Cai1, Yu-Yuan Zhao, Guang-Fan Han.   

Abstract

In the title compound, [CoCl(2)(C(5)H(9)N(3))(2)], the Co(II) atom adopts a slightly distorted tetra-hedral coordination geometry provided by two chloride anions and two N atoms from the organic ligands. The dihedral angle between the pyrazole rings is 85.91 (10)°. In the crystal structure, mol-ecules are linked into a three-dimensional network by inter-molecular N-H⋯N and N-H⋯Cl hydrogen-bonding inter-actions.

Entities:  

Year:  2008        PMID: 21203006      PMCID: PMC2961935          DOI: 10.1107/S1600536808020461

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of related pyrazole compounds, see: Francisco et al. (1980 ▶); Murray et al. (1988 ▶); Zhao & Eichhorn (2005 ▶).

Experimental

Crystal data

[CoCl2(C5H9N3)2] M = 352.13 Triclinic, a = 9.182 (3) Å b = 9.191 (4) Å c = 10.085 (3) Å α = 94.807 (13)° β = 106.105 (4)° γ = 107.814 (12)° V = 765.1 (5) Å3 Z = 2 Mo Kα radiation μ = 1.47 mm−1 T = 293 (2) K 0.25 × 0.15 × 0.04 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.836, T max = 0.940 7916 measured reflections 3456 independent reflections 2579 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.102 S = 0.98 3456 reflections 176 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.32 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808020461/rz2230sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808020461/rz2230Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CoCl2(C5H9N3)2]Z = 2
Mr = 352.13F000 = 362
Triclinic, P1Dx = 1.528 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 9.182 (3) ÅCell parameters from 2030 reflections
b = 9.191 (4) Åθ = 2.7–27.5º
c = 10.085 (3) ŵ = 1.47 mm1
α = 94.807 (13)ºT = 293 (2) K
β = 106.105 (4)ºPlate, colourless
γ = 107.814 (12)º0.25 × 0.15 × 0.04 mm
V = 765.1 (5) Å3
Rigaku Mercury2 (2x2 bin mode) diffractometer3456 independent reflections
Radiation source: fine-focus sealed tube2579 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.050
Detector resolution: 13.6612 pixels mm-1θmax = 27.5º
T = 293(2) Kθmin = 2.8º
CCD_Profile_fitting scansh = −11→11
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005)k = −11→11
Tmin = 0.836, Tmax = 0.940l = −13→13
7916 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H-atom parameters constrained
wR(F2) = 0.102  w = 1/[σ2(Fo2) + (0.0471P)2] where P = (Fo2 + 2Fc2)/3
S = 0.98(Δ/σ)max < 0.001
3456 reflectionsΔρmax = 0.35 e Å3
176 parametersΔρmin = −0.32 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.36013 (4)0.23415 (4)0.15884 (4)0.03042 (13)
Cl10.21996 (10)0.22767 (10)−0.06317 (8)0.0469 (2)
Cl20.24095 (9)0.03437 (9)0.25653 (8)0.0412 (2)
C10.4561 (3)0.5640 (3)0.3357 (3)0.0286 (6)
C20.3704 (3)0.6573 (3)0.3698 (3)0.0287 (6)
C30.2086 (4)0.5675 (3)0.3138 (3)0.0343 (7)
C40.6339 (4)0.6063 (4)0.3676 (3)0.0423 (8)
H4A0.66030.51340.35940.064*
H4B0.68790.66460.46150.064*
H4C0.66810.66830.30250.064*
C50.0604 (4)0.6012 (4)0.3138 (4)0.0548 (10)
H5A−0.03200.52350.24610.082*
H5B0.06870.70170.29000.082*
H5C0.04860.60010.40540.082*
C60.6694 (3)0.2278 (3)0.0980 (3)0.0328 (6)
C70.7967 (3)0.1765 (3)0.1557 (3)0.0289 (6)
C80.7838 (3)0.1407 (3)0.2824 (3)0.0322 (6)
C90.6290 (5)0.2806 (5)−0.0382 (4)0.0587 (10)
H9A0.51460.2584−0.07410.088*
H9B0.66210.2270−0.10390.088*
H9C0.68410.3905−0.02490.088*
C100.8851 (4)0.0783 (4)0.3884 (3)0.0491 (9)
H10A0.83900.05800.46240.074*
H10B0.99230.15320.42670.074*
H10C0.8894−0.01640.34450.074*
N10.3517 (3)0.4248 (3)0.2644 (2)0.0325 (5)
N20.2026 (3)0.4300 (3)0.2516 (3)0.0382 (6)
H2A0.11440.35400.20850.046*
N30.4325 (3)0.8117 (3)0.4457 (3)0.0368 (6)
H3A0.39340.87230.39070.044*
H3B0.54070.84730.46750.044*
N40.5806 (3)0.2228 (3)0.1851 (2)0.0335 (6)
N50.6537 (3)0.1685 (3)0.2974 (2)0.0342 (6)
H5D0.62070.15410.36870.041*
N60.9218 (3)0.1729 (3)0.1011 (3)0.0362 (6)
H6A0.89240.17820.00930.043*
H6B0.94130.08350.11040.043*
U11U22U33U12U13U23
Co10.0280 (2)0.0327 (2)0.0333 (2)0.01479 (17)0.00943 (16)0.00507 (16)
Cl10.0451 (5)0.0591 (5)0.0349 (4)0.0222 (4)0.0057 (3)0.0085 (4)
Cl20.0346 (4)0.0415 (4)0.0474 (5)0.0122 (3)0.0119 (3)0.0154 (3)
C10.0293 (15)0.0267 (15)0.0297 (15)0.0091 (11)0.0094 (11)0.0068 (11)
C20.0342 (16)0.0288 (15)0.0249 (14)0.0114 (12)0.0116 (11)0.0057 (11)
C30.0357 (17)0.0332 (17)0.0374 (17)0.0173 (13)0.0117 (13)0.0038 (13)
C40.0331 (17)0.0422 (19)0.049 (2)0.0115 (14)0.0106 (14)0.0073 (15)
C50.039 (2)0.048 (2)0.078 (3)0.0178 (16)0.0199 (18)−0.0025 (18)
C60.0285 (16)0.0401 (17)0.0332 (16)0.0120 (12)0.0133 (12)0.0117 (13)
C70.0249 (14)0.0283 (15)0.0322 (15)0.0085 (11)0.0090 (11)0.0005 (11)
C80.0262 (15)0.0392 (17)0.0314 (16)0.0140 (12)0.0075 (11)0.0031 (12)
C90.056 (2)0.096 (3)0.053 (2)0.045 (2)0.0306 (18)0.044 (2)
C100.049 (2)0.070 (3)0.0416 (19)0.0387 (18)0.0132 (15)0.0163 (17)
N10.0281 (13)0.0320 (14)0.0392 (14)0.0123 (10)0.0121 (10)0.0027 (11)
N20.0237 (13)0.0328 (14)0.0517 (17)0.0064 (10)0.0092 (11)−0.0040 (12)
N30.0401 (15)0.0314 (14)0.0364 (14)0.0109 (11)0.0113 (11)0.0016 (11)
N40.0322 (14)0.0442 (15)0.0313 (14)0.0198 (11)0.0122 (10)0.0122 (11)
N50.0347 (14)0.0486 (16)0.0309 (13)0.0232 (12)0.0165 (10)0.0146 (11)
N60.0297 (14)0.0422 (15)0.0398 (15)0.0145 (11)0.0148 (11)0.0033 (11)
Co1—N42.003 (2)C6—C91.483 (4)
Co1—N12.006 (2)C7—C81.373 (4)
Co1—Cl12.2373 (10)C7—N61.412 (3)
Co1—Cl22.2829 (11)C8—N51.340 (3)
C1—N11.337 (3)C8—C101.488 (4)
C1—C21.409 (4)C9—H9A0.9600
C1—C41.490 (4)C9—H9B0.9600
C2—C31.384 (4)C9—H9C0.9600
C2—N31.416 (3)C10—H10A0.9600
C3—N21.341 (4)C10—H10B0.9600
C3—C51.486 (4)C10—H10C0.9600
C4—H4A0.9600N1—N21.355 (3)
C4—H4B0.9600N2—H2A0.8600
C4—H4C0.9600N3—H3A0.9000
C5—H5A0.9600N3—H3B0.9000
C5—H5B0.9600N4—N51.364 (3)
C5—H5C0.9600N5—H5D0.8600
C6—N41.349 (3)N6—H6A0.9001
C6—C71.391 (4)N6—H6B0.9000
N4—Co1—N1116.07 (10)N5—C8—C7107.2 (2)
N4—Co1—Cl1114.54 (7)N5—C8—C10122.7 (3)
N1—Co1—Cl1103.32 (8)C7—C8—C10130.0 (3)
N4—Co1—Cl2103.72 (7)C6—C9—H9A109.5
N1—Co1—Cl2104.88 (8)C6—C9—H9B109.5
Cl1—Co1—Cl2114.26 (4)H9A—C9—H9B109.5
N1—C1—C2109.4 (2)C6—C9—H9C109.5
N1—C1—C4122.5 (2)H9A—C9—H9C109.5
C2—C1—C4128.1 (3)H9B—C9—H9C109.5
C3—C2—C1106.1 (2)C8—C10—H10A109.5
C3—C2—N3125.5 (2)C8—C10—H10B109.5
C1—C2—N3128.4 (3)H10A—C10—H10B109.5
N2—C3—C2106.3 (2)C8—C10—H10C109.5
N2—C3—C5122.1 (3)H10A—C10—H10C109.5
C2—C3—C5131.6 (3)H10B—C10—H10C109.5
C1—C4—H4A109.5C1—N1—N2106.1 (2)
C1—C4—H4B109.5C1—N1—Co1137.05 (19)
H4A—C4—H4B109.5N2—N1—Co1116.27 (17)
C1—C4—H4C109.5C3—N2—N1112.1 (2)
H4A—C4—H4C109.5C3—N2—H2A124.0
H4B—C4—H4C109.5N1—N2—H2A124.0
C3—C5—H5A109.5C2—N3—H3A109.0
C3—C5—H5B109.5C2—N3—H3B109.1
H5A—C5—H5B109.5H3A—N3—H3B108.0
C3—C5—H5C109.5C6—N4—N5105.4 (2)
H5A—C5—H5C109.5C6—N4—Co1132.8 (2)
H5B—C5—H5C109.5N5—N4—Co1120.26 (18)
N4—C6—C7109.9 (3)C8—N5—N4111.3 (2)
N4—C6—C9122.4 (3)C8—N5—H5D124.3
C7—C6—C9127.7 (3)N4—N5—H5D124.3
C8—C7—C6106.2 (2)C7—N6—H6A109.9
C8—C7—N6126.4 (3)C7—N6—H6B109.9
C6—C7—N6127.3 (3)H6A—N6—H6B108.5
D—H···AD—HH···AD···AD—H···A
C9—H9A···Cl10.962.673.570 (5)157
N2—H2A···N6i0.861.982.835 (3)175
N5—H5D···N3ii0.862.082.919 (4)164
N3—H3A···Cl2iii0.902.563.452 (3)169
N6—H6B···Cl1iv0.902.723.457 (3)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯Cl10.962.673.570 (5)157
N2—H2A⋯N6i0.861.982.835 (3)175
N5—H5D⋯N3ii0.862.082.919 (4)164
N3—H3A⋯Cl2iii0.902.563.452 (3)169
N6—H6B⋯Cl1iv0.902.723.457 (3)140

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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