| Literature DB >> 21200868 |
Gustavo Portalone1, Marcello Colapietro.
Abstract
IN THE TITLE COMPOUND (ALTERNATIVE NAME: pyridine-3-carbo-hydrazide, C(6)H(7)N(3)O), the asymmetric unit contains a single mol-ecule. In contrast with nicotinic acid and nicotinamide, the C=O bond is found to be oriented cis with respect to the C(ipso) C N fragment in the pyridine ring. The pyridine ring and the hydrazide group make a dihedral angle of 34.0 (2)°. In the crystal structure, mol-ecules are associated into a three-dimensional framework by a combination of N-H⋯N and three-centre N-H⋯O hydrogen bonds.Entities:
Year: 2007 PMID: 21200868 PMCID: PMC2915352 DOI: 10.1107/S1600536807066561
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H7N3O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 6060 reflections |
| θ = 2.3–30.0º | |
| µ = 0.10 mm−1 | |
| Plate, colourless | |
| 0.15 × 0.05 × 0.05 mm |
| Oxford Diffraction Xcalibur S CCD diffractometer | 1139 independent reflections |
| Radiation source: Enhance (Mo) X-ray source | 695 reflections with |
| Monochromator: graphite | |
| Detector resolution: 16.0696 pixels mm-1 | θmax = 30.0º |
| θmin = 2.3º | |
| ω and φ scans | |
| Absorption correction: none | |
| 3076 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 1139 reflections | Δρmax = 0.22 e Å−3 |
| 93 parameters | Δρmin = −0.22 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| O1 | 1.0228 (9) | 0.1920 (2) | 0.10123 (15) | 0.0690 (8) | |
| N1 | 0.4952 (10) | 0.1249 (3) | 0.32513 (17) | 0.0622 (8) | |
| N2 | 0.8838 (10) | 0.4009 (3) | 0.10818 (16) | 0.0613 (9) | |
| H21 | 0.777 (5) | 0.464 (3) | 0.1359 (12) | 0.074* | |
| N3 | 0.9984 (11) | 0.4321 (3) | 0.02617 (17) | 0.0670 (9) | |
| H31 | 1.210 (6) | 0.4151 (6) | 0.0228 (2) | 0.080* | |
| H32 | 0.889 (3) | 0.3722 (18) | −0.0149 (13) | 0.080* | |
| C2 | 0.6160 (10) | 0.1529 (3) | 0.2485 (2) | 0.0565 (9) | |
| H2 | 0.5944 | 0.0902 | 0.2056 | 0.068* | |
| C3 | 0.7709 (10) | 0.2678 (3) | 0.22785 (19) | 0.0517 (8) | |
| C4 | 0.7961 (10) | 0.3597 (3) | 0.2905 (2) | 0.0574 (9) | |
| H4 | 0.8954 | 0.4406 | 0.2786 | 0.069* | |
| C5 | 0.6755 (12) | 0.3321 (3) | 0.3700 (2) | 0.0648 (11) | |
| H5 | 0.6931 | 0.3932 | 0.4140 | 0.078* | |
| C6 | 0.5291 (13) | 0.2149 (4) | 0.3845 (2) | 0.0673 (10) | |
| H6 | 0.4474 | 0.1966 | 0.4397 | 0.081* | |
| C7 | 0.9030 (11) | 0.2833 (3) | 0.14019 (19) | 0.0545 (8) |
| O1 | 0.089 (2) | 0.0590 (14) | 0.0593 (13) | 0.0139 (16) | 0.0077 (16) | −0.0061 (11) |
| N1 | 0.075 (2) | 0.0528 (15) | 0.0586 (15) | −0.0012 (19) | 0.0015 (17) | 0.0083 (13) |
| N2 | 0.083 (2) | 0.0536 (15) | 0.0468 (13) | 0.0037 (17) | 0.0062 (16) | 0.0023 (12) |
| N3 | 0.083 (2) | 0.0649 (17) | 0.0526 (14) | −0.004 (2) | 0.0038 (18) | 0.0066 (13) |
| C2 | 0.071 (2) | 0.0457 (15) | 0.0528 (16) | 0.0009 (18) | −0.0027 (18) | 0.0009 (13) |
| C3 | 0.062 (2) | 0.0440 (14) | 0.0496 (15) | 0.0019 (17) | −0.0038 (16) | −0.0007 (13) |
| C4 | 0.071 (2) | 0.0475 (16) | 0.0535 (16) | 0.0034 (19) | −0.0040 (18) | −0.0040 (14) |
| C5 | 0.089 (3) | 0.0574 (18) | 0.0480 (16) | 0.004 (2) | −0.004 (2) | −0.0041 (14) |
| C6 | 0.083 (3) | 0.066 (2) | 0.0526 (17) | 0.005 (2) | 0.002 (2) | 0.0060 (16) |
| C7 | 0.063 (2) | 0.0497 (15) | 0.0505 (15) | 0.0023 (18) | −0.0032 (17) | −0.0014 (14) |
| O1—C7 | 1.230 (4) | C2—H2 | 0.9500 |
| N1—C2 | 1.334 (4) | C3—C4 | 1.387 (4) |
| N1—C6 | 1.340 (4) | C3—C7 | 1.490 (4) |
| N2—C7 | 1.335 (4) | C4—C5 | 1.375 (4) |
| N2—N3 | 1.412 (4) | C4—H4 | 0.9500 |
| N2—H21 | 0.89 (4) | C5—C6 | 1.373 (5) |
| N3—H31 | 0.84 (5) | C5—H5 | 0.9500 |
| N3—H32 | 1.00 (5) | C6—H6 | 0.9500 |
| C2—C3 | 1.385 (4) | ||
| C2—N1—C6 | 116.8 (3) | C5—C4—C3 | 119.1 (3) |
| C7—N2—N3 | 123.1 (3) | C5—C4—H4 | 120.5 |
| C7—N2—H21 | 121.2 | C3—C4—H4 | 120.5 |
| N3—N2—H21 | 115.4 | C6—C5—C4 | 118.9 (3) |
| N2—N3—H31 | 108.4 | C6—C5—H5 | 120.6 |
| N2—N3—H32 | 108.7 | C4—C5—H5 | 120.6 |
| H31—N3—H32 | 103.9 | N1—C6—C5 | 123.5 (3) |
| N1—C2—C3 | 124.0 (3) | N1—C6—H6 | 118.2 |
| N1—C2—H2 | 118.0 | C5—C6—H6 | 118.2 |
| C3—C2—H2 | 118.0 | O1—C7—N2 | 123.2 (3) |
| C2—C3—C4 | 117.7 (3) | O1—C7—C3 | 120.9 (3) |
| C2—C3—C7 | 117.6 (3) | N2—C7—C3 | 115.8 (3) |
| C4—C3—C7 | 124.6 (3) | ||
| C6—N1—C2—C3 | 0.0 (6) | C4—C5—C6—N1 | −0.3 (7) |
| N1—C2—C3—C4 | −1.1 (6) | N3—N2—C7—O1 | 0.2 (7) |
| N1—C2—C3—C7 | 178.1 (4) | N3—N2—C7—C3 | 179.8 (4) |
| C2—C3—C4—C5 | 1.5 (6) | C2—C3—C7—O1 | −33.7 (6) |
| C7—C3—C4—C5 | −177.6 (4) | C4—C3—C7—O1 | 145.5 (4) |
| C3—C4—C5—C6 | −0.9 (6) | C2—C3—C7—N2 | 146.7 (4) |
| C2—N1—C6—C5 | 0.7 (7) | C4—C3—C7—N2 | −34.2 (6) |
| H··· | ||||
| N2—H21···N1i | 0.89 (4) | 2.09 (4) | 2.964 (4) | 168 (4) |
| N3—H31···O1ii | 0.84 (5) | 2.57 (5) | 3.146 (4) | 127 (4) |
| N3—H32···O1iii | 1.00 (5) | 2.08 (5) | 3.027 (4) | 157 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H21⋯N1i | 0.89 (4) | 2.09 (4) | 2.964 (4) | 168 (4) |
| N3—H31⋯O1ii | 0.84 (5) | 2.57 (5) | 3.146 (4) | 127 (4) |
| N3—H32⋯O1iii | 1.00 (5) | 2.08 (5) | 3.027 (4) | 157 (4) |
Symmetry codes: (i) ; (ii) ; (iii) .