| Literature DB >> 21200798 |
Hossein Aghabozorg, Faranak Manteghi, Mohammad Ghadermazi.
Abstract
The asymmetric unit of the title salt, C(4)H(12)N(2) (2+)·2C(7)H(4)NO(4) (-) or pipzH(2) (2+)·2(py-2,3-dcH(-)), prepared by a reaction between pyridine-2,3-dicarboxylic acid (py-2,3-dcH(2)) and piperazine (pipz), contains a monoanion and half of a centrosymmetric dication. The anionic fragment individually has two intra-molecular hydrogen bonds, an almost linear O-H⋯O bond between two carboxyl-ate groups and a C-H⋯O bond between the aromatic ring and carboxyl-ate group. Other O-H⋯O, N-H⋯O and C-H⋯O hydrogen bonds are responsible for three-dimensional expansion of the structure.Entities:
Year: 2007 PMID: 21200798 PMCID: PMC2915291 DOI: 10.1107/S1600536807065002
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H12N22+·2C7H4NO4− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2095 reflections |
| θ = 2.7–28.6° | |
| µ = 0.13 mm−1 | |
| β = 106.574 (2)° | Prism, colourless |
| 0.20 × 0.15 × 0.15 mm | |
| Bruker SMART APEXII diffractometer | 2104 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 29.0°, θmin = 2.7° |
| φ and ω scans | |
| 6962 measured reflections | |
| 2341 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H-atom parameters constrained | |
| 2341 reflections | (Δ/σ)max < 0.001 |
| 136 parameters | Δρmax = 0.43 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.88615 (11) | 0.17340 (7) | 0.51531 (8) | 0.02036 (18) | |
| O2 | 0.98274 (10) | 0.08122 (7) | 0.70930 (8) | 0.02041 (18) | |
| O3 | 0.72179 (11) | 0.13267 (7) | 0.28657 (8) | 0.02033 (18) | |
| H3O | 0.7842 | 0.1467 | 0.3657 | 0.030* | |
| O4 | 0.54664 (10) | −0.00934 (8) | 0.17740 (8) | 0.02126 (18) | |
| N1 | 0.77161 (11) | −0.10247 (8) | 0.63974 (9) | 0.01409 (18) | |
| N2 | 0.98062 (11) | 0.40793 (8) | 0.59237 (8) | 0.01352 (17) | |
| H2A | 1.0047 | 0.4441 | 0.6726 | 0.016* | |
| H2B | 0.9555 | 0.3300 | 0.6036 | 0.016* | |
| C1 | 0.76624 (12) | −0.02324 (8) | 0.54104 (10) | 0.01174 (18) | |
| C2 | 0.65530 (12) | −0.04141 (9) | 0.41030 (10) | 0.01209 (19) | |
| C3 | 0.54476 (13) | −0.14260 (9) | 0.39063 (10) | 0.0147 (2) | |
| H3A | 0.4655 | −0.1565 | 0.3052 | 0.018* | |
| C4 | 0.54919 (13) | −0.22223 (9) | 0.49329 (11) | 0.0161 (2) | |
| H4A | 0.4736 | −0.2902 | 0.4802 | 0.019* | |
| C5 | 0.66802 (14) | −0.19939 (9) | 0.61616 (10) | 0.0160 (2) | |
| H5A | 0.6760 | −0.2552 | 0.6867 | 0.019* | |
| C6 | 0.88903 (13) | 0.08412 (9) | 0.59330 (10) | 0.01317 (19) | |
| C7 | 0.63871 (13) | 0.03075 (9) | 0.28268 (10) | 0.01448 (19) | |
| C8 | 1.13286 (13) | 0.40868 (9) | 0.53727 (10) | 0.0146 (2) | |
| H8A | 1.1067 | 0.3580 | 0.4560 | 0.018* | |
| H8B | 1.2353 | 0.3736 | 0.6036 | 0.018* | |
| C9 | 0.82508 (13) | 0.46401 (9) | 0.49653 (10) | 0.0147 (2) | |
| H9A | 0.7270 | 0.4659 | 0.5365 | 0.018* | |
| H9B | 0.7892 | 0.4149 | 0.4141 | 0.018* |
| O1 | 0.0283 (4) | 0.0139 (3) | 0.0167 (4) | −0.0056 (3) | 0.0029 (3) | 0.0024 (3) |
| O2 | 0.0234 (4) | 0.0200 (4) | 0.0146 (4) | −0.0074 (3) | 0.0003 (3) | 0.0013 (3) |
| O3 | 0.0268 (4) | 0.0184 (4) | 0.0135 (3) | −0.0025 (3) | 0.0021 (3) | 0.0034 (3) |
| O4 | 0.0197 (4) | 0.0294 (4) | 0.0129 (4) | −0.0027 (3) | 0.0019 (3) | 0.0005 (3) |
| N1 | 0.0165 (4) | 0.0130 (4) | 0.0133 (4) | 0.0001 (3) | 0.0051 (3) | 0.0006 (3) |
| N2 | 0.0147 (4) | 0.0136 (4) | 0.0120 (4) | −0.0018 (3) | 0.0033 (3) | 0.0006 (3) |
| C1 | 0.0120 (4) | 0.0110 (4) | 0.0129 (4) | 0.0007 (3) | 0.0047 (3) | −0.0008 (3) |
| C2 | 0.0119 (4) | 0.0128 (4) | 0.0123 (4) | 0.0023 (3) | 0.0047 (3) | −0.0005 (3) |
| C3 | 0.0124 (4) | 0.0162 (4) | 0.0158 (5) | 0.0002 (3) | 0.0044 (4) | −0.0040 (4) |
| C4 | 0.0160 (4) | 0.0131 (4) | 0.0209 (5) | −0.0022 (3) | 0.0082 (4) | −0.0034 (4) |
| C5 | 0.0202 (5) | 0.0125 (4) | 0.0171 (5) | −0.0004 (4) | 0.0084 (4) | 0.0011 (4) |
| C6 | 0.0136 (4) | 0.0123 (4) | 0.0145 (4) | −0.0005 (3) | 0.0054 (3) | −0.0009 (3) |
| C7 | 0.0130 (4) | 0.0181 (5) | 0.0128 (4) | 0.0035 (3) | 0.0044 (3) | 0.0017 (4) |
| C8 | 0.0143 (4) | 0.0156 (4) | 0.0143 (4) | 0.0032 (3) | 0.0046 (4) | 0.0000 (3) |
| C9 | 0.0113 (4) | 0.0181 (5) | 0.0138 (4) | −0.0013 (3) | 0.0023 (3) | 0.0003 (4) |
| O1—C6 | 1.2769 (12) | C2—C3 | 1.4053 (14) |
| O2—C6 | 1.2319 (12) | C2—C7 | 1.5284 (14) |
| O3—C7 | 1.3036 (13) | C3—C4 | 1.3815 (15) |
| O3—H3O | 0.8501 | C3—H3A | 0.9500 |
| O4—C7 | 1.2209 (13) | C4—C5 | 1.3872 (15) |
| N1—C5 | 1.3348 (13) | C4—H4A | 0.9500 |
| N1—C1 | 1.3456 (12) | C5—H5A | 0.9500 |
| N2—C8 | 1.4903 (13) | C8—C9i | 1.5129 (14) |
| N2—C9 | 1.4933 (13) | C8—H8A | 0.9900 |
| N2—H2A | 0.9000 | C8—H8B | 0.9900 |
| N2—H2B | 0.9000 | C9—C8i | 1.5129 (14) |
| C1—C2 | 1.4169 (13) | C9—H9A | 0.9900 |
| C1—C6 | 1.5394 (13) | C9—H9B | 0.9900 |
| C7—O3—H3O | 110.0 | N1—C5—H5A | 118.5 |
| C5—N1—C1 | 119.93 (9) | C4—C5—H5A | 118.5 |
| C8—N2—C9 | 110.87 (7) | O2—C6—O1 | 122.99 (9) |
| C8—N2—H2A | 112.1 | O2—C6—C1 | 118.55 (9) |
| C9—N2—H2A | 110.9 | O1—C6—C1 | 118.44 (9) |
| C8—N2—H2B | 107.1 | O4—C7—O3 | 120.92 (9) |
| C9—N2—H2B | 108.1 | O4—C7—C2 | 118.56 (9) |
| H2A—N2—H2B | 107.5 | O3—C7—C2 | 120.51 (9) |
| N1—C1—C2 | 121.50 (9) | N2—C8—C9i | 110.92 (8) |
| N1—C1—C6 | 110.63 (8) | N2—C8—H8A | 109.5 |
| C2—C1—C6 | 127.85 (9) | C9i—C8—H8A | 109.5 |
| C3—C2—C1 | 116.74 (9) | N2—C8—H8B | 109.5 |
| C3—C2—C7 | 113.19 (8) | C9i—C8—H8B | 109.5 |
| C1—C2—C7 | 130.06 (9) | H8A—C8—H8B | 108.0 |
| C4—C3—C2 | 121.22 (9) | N2—C9—C8i | 110.15 (8) |
| C4—C3—H3A | 119.4 | N2—C9—H9A | 109.6 |
| C2—C3—H3A | 119.4 | C8i—C9—H9A | 109.6 |
| C3—C4—C5 | 117.58 (9) | N2—C9—H9B | 109.6 |
| C3—C4—H4A | 121.2 | C8i—C9—H9B | 109.6 |
| C5—C4—H4A | 121.2 | H9A—C9—H9B | 108.1 |
| N1—C5—C4 | 122.94 (9) | ||
| C5—N1—C1—C2 | −1.52 (14) | N1—C1—C6—O2 | 5.34 (13) |
| C5—N1—C1—C6 | 176.91 (9) | C2—C1—C6—O2 | −176.36 (10) |
| N1—C1—C2—C3 | 3.28 (14) | N1—C1—C6—O1 | −173.07 (9) |
| C6—C1—C2—C3 | −174.85 (9) | C2—C1—C6—O1 | 5.23 (15) |
| N1—C1—C2—C7 | −174.82 (9) | C3—C2—C7—O4 | −6.01 (13) |
| C6—C1—C2—C7 | 7.04 (16) | C1—C2—C7—O4 | 172.15 (10) |
| C1—C2—C3—C4 | −2.13 (14) | C3—C2—C7—O3 | 174.22 (9) |
| C7—C2—C3—C4 | 176.30 (9) | C1—C2—C7—O3 | −7.62 (16) |
| C2—C3—C4—C5 | −0.66 (15) | C9—N2—C8—C9i | 57.28 (11) |
| C1—N1—C5—C4 | −1.56 (15) | C8—N2—C9—C8i | −56.84 (11) |
| C3—C4—C5—N1 | 2.64 (15) |
| H··· | ||||
| O3—H3O···O1 | 0.85 | 1.57 | 2.4219 (11) | 175 |
| N2—H2A···O2ii | 0.90 | 1.94 | 2.7778 (12) | 154 |
| N2—H2B···O1 | 0.90 | 1.97 | 2.7571 (11) | 146 |
| C3—H3A···O4 | 0.95 | 2.31 | 2.6773 (13) | 102 |
| C8—H8A···O2iii | 0.99 | 2.58 | 3.2982 (13) | 130 |
| C9—H9A···O4iv | 0.99 | 2.39 | 3.3491 (14) | 163 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3O⋯O1 | 0.85 | 1.57 | 2.4219 (11) | 175 |
| N2—H2 | 0.90 | 1.94 | 2.7778 (12) | 154 |
| N2—H2 | 0.90 | 1.97 | 2.7571 (11) | 146 |
| C3—H3 | 0.95 | 2.31 | 2.6773 (13) | 102 |
| C8—H8 | 0.99 | 2.58 | 3.2982 (13) | 130 |
| C9—H9 | 0.99 | 2.39 | 3.3491 (14) | 163 |
Symmetry codes: (i) ; (ii) ; (iii) .