| Literature DB >> 21200587 |
Mustafa Tombul, Kutalmis Güven, Ingrid Svoboda.
Abstract
The structural unit of the title compound, [K(C(6)H(3)N(2)O(4))(C(6)H(4)N(2)O(4))(H(2)O)(2)](n), consists of one potassium cation, one hydrogen pyrazine-2,3-dicarboxyl-ate anion, one pyrazine-2,3-dicarboxylic acid mol-ecule and two water mol-ecules; this is twice the asymmetric unit, since the potassium cation lies on an inversion centre. Each anion or acid mol-ecule is linked to two potassium cations, while the potassium cation has contacts to four symmetry-equivalent organic ligands, with two different coordination modes towards this cation. In addition, each potassium cation is coordinated by two water O atoms, raising the coordination number to eight. One of the carboxyl groups of the acid retains its H atom, which forms a hydrogen bond to a coordinated water mol-ecule. The other carboxyl group is deprotonated in half of the ligands and protonated in the other half, taking part in a strong O-H⋯O hydrogen bond disordered over an inversion centre. The stabilization of the crystal structure is further assisted by O-H⋯O and O-H⋯N hydrogen bonds in which water acts as the donor.Entities:
Year: 2007 PMID: 21200587 PMCID: PMC2915164 DOI: 10.1107/S1600536807066202
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [K(C6H3N2O4)(C6H4N2O4)(H2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2574 reflections | |
| θ = 2.7–27.5º | |
| µ = 0.40 mm−1 | |
| α = 68.39 (2)º | |
| β = 81.18 (1)º | Prism, colorless |
| γ = 64.24 (2)º | 0.40 × 0.36 × 0.14 mm |
| Oxford Diffraction Xcalibur diffractometer with Sapphire CCD detector | 1639 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 1357 reflections with |
| Monochromator: graphite | |
| Detector resolution: 8.4012 pixels mm-1 | θmax = 26.4º |
| θmin = 2.7º | |
| ω and φ scans | |
| Absorption correction: numerical[using a multifaceted crystal model based on expressions derived by Clark & Reid (1995)] | |
| 4541 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 1639 reflections | Δρmax = 0.30 e Å−3 |
| 141 parameters | Δρmin = −0.24 e Å−3 |
| 3 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.043 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.2243 (2) | −0.0442 (2) | 0.6857 (2) | 0.0317 (4) | |
| H1A | 0.0951 | −0.0140 | 0.6552 | 0.038* | |
| C2 | 0.3500 (2) | −0.2386 (2) | 0.7694 (2) | 0.0335 (4) | |
| H2 | 0.3046 | −0.3358 | 0.7905 | 0.040* | |
| C3 | 0.5925 (2) | −0.1443 (2) | 0.78702 (18) | 0.0249 (3) | |
| C4 | 0.4681 (2) | 0.0507 (2) | 0.69820 (18) | 0.0236 (3) | |
| C5 | 0.5421 (2) | 0.2104 (2) | 0.6487 (2) | 0.0289 (3) | |
| C6 | 0.8033 (2) | −0.2156 (2) | 0.8493 (2) | 0.0277 (3) | |
| N1 | 0.28268 (17) | 0.10040 (18) | 0.64756 (16) | 0.0281 (3) | |
| N2 | 0.53451 (18) | −0.28984 (18) | 0.82048 (17) | 0.0310 (3) | |
| O1 | 0.41860 (17) | 0.38402 (16) | 0.56448 (17) | 0.0394 (3) | |
| H1 | 0.476 (7) | 0.455 (6) | 0.533 (5) | 0.039 (11)* | 0.50 |
| O2 | 0.94651 (16) | −0.29530 (18) | 0.77161 (16) | 0.0392 (3) | |
| O3 | 0.14687 (17) | 0.66521 (18) | 0.15762 (17) | 0.0407 (3) | |
| H3A | 0.195 (3) | 0.727 (3) | 0.190 (3) | 0.057 (6)* | |
| H3B | 0.245 (2) | 0.563 (2) | 0.149 (3) | 0.057 (6)* | |
| O4 | 0.71570 (17) | 0.16296 (17) | 0.68558 (19) | 0.0476 (4) | |
| O5 | 0.80518 (19) | −0.1943 (2) | 1.00104 (17) | 0.0504 (4) | |
| H5 | 0.925 (4) | −0.241 (4) | 1.038 (3) | 0.065 (7)* | |
| K1 | 0.0000 | 0.5000 | 0.5000 | 0.0471 (2) |
| C1 | 0.0200 (7) | 0.0376 (8) | 0.0396 (8) | −0.0125 (6) | −0.0024 (6) | −0.0137 (7) |
| C2 | 0.0279 (8) | 0.0336 (8) | 0.0424 (9) | −0.0165 (6) | 0.0010 (6) | −0.0120 (7) |
| C3 | 0.0220 (7) | 0.0276 (7) | 0.0250 (7) | −0.0091 (6) | −0.0002 (5) | −0.0101 (5) |
| C4 | 0.0213 (7) | 0.0259 (7) | 0.0239 (7) | −0.0076 (6) | −0.0016 (5) | −0.0107 (5) |
| C5 | 0.0255 (7) | 0.0271 (7) | 0.0356 (8) | −0.0088 (6) | −0.0030 (6) | −0.0134 (6) |
| C6 | 0.0236 (7) | 0.0241 (7) | 0.0329 (8) | −0.0082 (6) | −0.0042 (6) | −0.0075 (6) |
| N1 | 0.0210 (6) | 0.0293 (6) | 0.0322 (7) | −0.0067 (5) | −0.0031 (5) | −0.0116 (5) |
| N2 | 0.0253 (6) | 0.0274 (6) | 0.0377 (7) | −0.0107 (5) | −0.0017 (5) | −0.0079 (5) |
| O1 | 0.0301 (6) | 0.0261 (6) | 0.0558 (8) | −0.0121 (5) | −0.0066 (5) | −0.0039 (5) |
| O2 | 0.0221 (5) | 0.0465 (7) | 0.0535 (7) | −0.0108 (5) | 0.0004 (5) | −0.0257 (6) |
| O3 | 0.0316 (6) | 0.0372 (7) | 0.0555 (8) | −0.0072 (5) | −0.0149 (5) | −0.0206 (6) |
| O4 | 0.0308 (6) | 0.0333 (6) | 0.0824 (10) | −0.0118 (5) | −0.0192 (6) | −0.0174 (6) |
| O5 | 0.0297 (6) | 0.0743 (9) | 0.0417 (7) | −0.0057 (6) | −0.0116 (5) | −0.0282 (6) |
| K1 | 0.0338 (3) | 0.0339 (3) | 0.0456 (3) | −0.0005 (2) | −0.0012 (2) | 0.0006 (2) |
| C1—N1 | 1.327 (2) | N1—K1 | 2.8655 (15) |
| C1—C2 | 1.383 (2) | O1—K1 | 2.8995 (12) |
| C1—H1A | 0.9300 | O1—H1 | 0.80 (4) |
| C2—N2 | 1.331 (2) | O3—K1 | 2.8771 (15) |
| C2—H2 | 0.9300 | O3—H3A | 0.85 (2) |
| C3—N2 | 1.3381 (19) | O3—H3B | 0.848 (9) |
| C3—C4 | 1.392 (2) | O5—H5 | 0.86 (3) |
| C3—C6 | 1.5097 (19) | K1—N1i | 2.8655 (15) |
| C4—N1 | 1.3397 (18) | K1—O3i | 2.8771 (15) |
| C4—C5 | 1.507 (2) | K1—O1i | 2.8995 (12) |
| C5—O4 | 1.2248 (18) | K1—O2ii | 3.0897 (13) |
| C5—O1 | 1.2760 (19) | K1—O2iii | 3.0897 (13) |
| C6—O2 | 1.1983 (19) | K1—H3A | 3.09 (2) |
| C6—O5 | 1.3073 (19) | ||
| N1—C1—C2 | 121.91 (13) | N1i—K1—O3 | 72.84 (4) |
| N1—C1—H1A | 119.0 | N1—K1—O3 | 107.16 (4) |
| C2—C1—H1A | 119.0 | O3i—K1—O3 | 180.0 |
| N2—C2—C1 | 121.64 (14) | N1i—K1—O1i | 55.92 (4) |
| N2—C2—H2 | 119.2 | N1—K1—O1i | 124.08 (4) |
| C1—C2—H2 | 119.2 | O3i—K1—O1i | 76.02 (4) |
| N2—C3—C4 | 121.58 (13) | O3—K1—O1i | 103.98 (4) |
| N2—C3—C6 | 113.19 (12) | N1i—K1—O1 | 124.08 (4) |
| C4—C3—C6 | 125.20 (13) | N1—K1—O1 | 55.92 (4) |
| N1—C4—C3 | 121.03 (13) | O3i—K1—O1 | 103.98 (4) |
| N1—C4—C5 | 118.15 (13) | O3—K1—O1 | 76.02 (4) |
| C3—C4—C5 | 120.76 (13) | O1i—K1—O1 | 180.000 (1) |
| O4—C5—O1 | 125.67 (14) | N1i—K1—O2ii | 107.44 (4) |
| O4—C5—C4 | 118.05 (13) | N1—K1—O2ii | 72.56 (4) |
| O1—C5—C4 | 116.21 (13) | O3i—K1—O2ii | 116.00 (3) |
| O2—C6—O5 | 126.25 (14) | O3—K1—O2ii | 64.00 (3) |
| O2—C6—C3 | 121.86 (13) | O1i—K1—O2ii | 81.35 (3) |
| O5—C6—C3 | 111.63 (13) | O1—K1—O2ii | 98.65 (4) |
| C1—N1—C4 | 117.01 (13) | N1i—K1—O2iii | 72.56 (4) |
| C1—N1—K1 | 119.50 (9) | N1—K1—O2iii | 107.44 (4) |
| C4—N1—K1 | 123.12 (9) | O3i—K1—O2iii | 64.00 (3) |
| C2—N2—C3 | 116.78 (13) | O3—K1—O2iii | 116.00 (3) |
| C5—O1—K1 | 125.42 (10) | O1i—K1—O2iii | 98.65 (4) |
| C5—O1—H1 | 109 (3) | O1—K1—O2iii | 81.35 (4) |
| K1—O1—H1 | 126 (3) | O2ii—K1—O2iii | 180.00 (2) |
| C6—O2—K1iv | 132.38 (10) | N1i—K1—H3A | 70.6 (3) |
| K1—O3—H3A | 96.3 (15) | N1—K1—H3A | 109.4 (3) |
| K1—O3—H3B | 99.8 (15) | O3i—K1—H3A | 164.1 (2) |
| H3A—O3—H3B | 106.6 (13) | O3—K1—H3A | 15.9 (2) |
| C6—O5—H5 | 111.0 (16) | O1i—K1—H3A | 112.9 (3) |
| N1i—K1—N1 | 180.0 | O1—K1—H3A | 67.1 (3) |
| N1i—K1—O3i | 107.16 (4) | O2ii—K1—H3A | 79.1 (2) |
| N1—K1—O3i | 72.84 (4) | O2iii—K1—H3A | 100.9 (2) |
| N1—C1—C2—N2 | 1.9 (2) | O4—C5—O1—K1 | −175.29 (12) |
| N2—C3—C4—N1 | 2.1 (2) | C4—C5—O1—K1 | 7.78 (19) |
| C6—C3—C4—N1 | 179.87 (13) | O5—C6—O2—K1iv | 154.68 (13) |
| N2—C3—C4—C5 | −174.99 (13) | C3—C6—O2—K1iv | −19.1 (2) |
| C6—C3—C4—C5 | 2.8 (2) | C1—N1—K1—O3i | 61.01 (11) |
| N1—C4—C5—O4 | −175.63 (14) | C4—N1—K1—O3i | −111.76 (11) |
| C3—C4—C5—O4 | 1.5 (2) | C1—N1—K1—O3 | −118.99 (11) |
| N1—C4—C5—O1 | 1.5 (2) | C4—N1—K1—O3 | 68.24 (11) |
| C3—C4—C5—O1 | 178.67 (13) | C1—N1—K1—O1i | 1.94 (12) |
| N2—C3—C6—O2 | 74.92 (18) | C4—N1—K1—O1i | −170.83 (10) |
| C4—C3—C6—O2 | −103.06 (18) | C1—N1—K1—O1 | −178.06 (12) |
| N2—C3—C6—O5 | −99.65 (16) | C4—N1—K1—O1 | 9.17 (10) |
| C4—C3—C6—O5 | 82.37 (18) | C1—N1—K1—O2ii | −64.29 (11) |
| C2—C1—N1—C4 | −1.8 (2) | C4—N1—K1—O2ii | 122.94 (11) |
| C2—C1—N1—K1 | −174.99 (12) | C1—N1—K1—O2iii | 115.71 (11) |
| C3—C4—N1—C1 | −0.1 (2) | C4—N1—K1—O2iii | −57.06 (11) |
| C5—C4—N1—C1 | 177.00 (12) | C5—O1—K1—N1i | 171.23 (11) |
| C3—C4—N1—K1 | 172.82 (10) | C5—O1—K1—N1 | −8.77 (11) |
| C5—C4—N1—K1 | −10.06 (17) | C5—O1—K1—O3i | 48.85 (13) |
| C1—C2—N2—C3 | 0.0 (2) | C5—O1—K1—O3 | −131.15 (13) |
| C4—C3—N2—C2 | −1.9 (2) | C5—O1—K1—O2ii | −70.80 (13) |
| C6—C3—N2—C2 | −179.99 (12) | C5—O1—K1—O2iii | 109.20 (13) |
| H··· | ||||
| O3—H3A···O4v | 0.85 (2) | 1.899 (10) | 2.7334 (17) | 167 (2) |
| O3—H3B···N2ii | 0.848 (9) | 2.035 (10) | 2.8701 (19) | 168 (2) |
| O5—H5···O3vi | 0.86 (3) | 1.76 (3) | 2.5994 (17) | 168 (2) |
| O1—H1···O1v | 0.80 (4) | 1.68 (4) | 2.480 (2) | 171 (5) |
Selected bond lengths (Å)
| N1—K1 | 2.8655 (15) |
| O1—K1 | 2.8995 (12) |
| O3—K1 | 2.8771 (15) |
| K1—N1i | 2.8655 (15) |
| K1—O3i | 2.8771 (15) |
| K1—O1i | 2.8995 (12) |
| K1—O2ii | 3.0897 (13) |
| K1—O2iii | 3.0897 (13) |
Symmetry codes: (i) ; (ii) ; (iii) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3 | 0.85 (2) | 1.899 (10) | 2.7334 (17) | 167 (2) |
| O3—H3 | 0.848 (9) | 2.035 (10) | 2.8701 (19) | 168 (2) |
| O5—H5⋯O3v | 0.86 (3) | 1.76 (3) | 2.5994 (17) | 168 (2) |
| O1—H1⋯O1iv | 0.80 (4) | 1.68 (4) | 2.480 (2) | 171 (5) |
Symmetry codes: (ii) ; (iv) ; (v) .