| Literature DB >> 21203048 |
Hossein Aghabozorg, Mahdieh Parvizi, Elahe Sadrkhanlou.
Abstract
The title six-coordinated distorted octa-hedral complex, [Cu(C(6)Entities:
Year: 2008 PMID: 21203048 PMCID: PMC2961978 DOI: 10.1107/S1600536808022885
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C6H3N2O4)2(C10H8N2)]·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 9557 reflections |
| θ = 2.6–30.5º | |
| µ = 1.01 mm−1 | |
| β = 122.480 (5)º | Prism, colourless |
| 0.20 × 0.20 × 0.20 mm | |
| Bruker SMART APEXII diffractometer | 3500 independent reflections |
| Radiation source: fine-focus sealed tube | 3289 reflections with |
| Monochromator: graphite | |
| θmax = 30.5º | |
| φ and ω scans | θmin = 2.6º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 14982 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 3500 reflections | Δρmax = 0.49 e Å−3 |
| 177 parameters | Δρmin = −0.31 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 1.0000 | 0.367362 (16) | 0.2500 | 0.01104 (5) | |
| O1 | 0.91326 (4) | 0.21893 (8) | 0.16501 (5) | 0.01386 (13) | |
| O2 | 0.85176 (5) | 0.08782 (9) | 0.02861 (6) | 0.02271 (16) | |
| O3 | 0.90660 (5) | 0.00760 (8) | −0.12364 (6) | 0.02014 (15) | |
| H3O | 0.8658 | −0.0282 | −0.1804 | 0.024* | |
| O4 | 0.81385 (5) | 0.19258 (9) | −0.16881 (6) | 0.02211 (16) | |
| N1 | 1.02854 (5) | 0.32913 (9) | 0.12702 (6) | 0.01404 (15) | |
| N2 | 1.01283 (6) | 0.27792 (10) | −0.05007 (6) | 0.01888 (17) | |
| N3 | 0.91587 (5) | 0.53313 (8) | 0.19274 (6) | 0.01230 (14) | |
| C1 | 0.96492 (6) | 0.24626 (10) | 0.05929 (7) | 0.01255 (15) | |
| C2 | 0.95681 (6) | 0.22146 (10) | −0.02994 (7) | 0.01416 (16) | |
| C3 | 1.07722 (7) | 0.35806 (12) | 0.01940 (8) | 0.01958 (19) | |
| H3A | 1.1187 | 0.3983 | 0.0079 | 0.023* | |
| C4 | 1.08554 (7) | 0.38463 (11) | 0.10811 (8) | 0.01748 (18) | |
| H4A | 1.1321 | 0.4426 | 0.1556 | 0.021* | |
| C5 | 0.90413 (6) | 0.17769 (10) | 0.08456 (7) | 0.01334 (16) | |
| C6 | 0.88379 (7) | 0.13731 (10) | −0.11323 (7) | 0.01512 (17) | |
| C7 | 0.82914 (6) | 0.52122 (10) | 0.13793 (7) | 0.01459 (16) | |
| H7A | 0.8039 | 0.4274 | 0.1197 | 0.018* | |
| C8 | 0.77532 (6) | 0.64164 (10) | 0.10722 (7) | 0.01620 (18) | |
| H8A | 0.7142 | 0.6307 | 0.0692 | 0.019* | |
| C9 | 0.81274 (6) | 0.77869 (11) | 0.13324 (7) | 0.01659 (17) | |
| H9A | 0.7773 | 0.8630 | 0.1126 | 0.020* | |
| C10 | 0.90229 (6) | 0.79146 (10) | 0.18959 (7) | 0.01464 (17) | |
| H10A | 0.9289 | 0.8843 | 0.2076 | 0.018* | |
| C11 | 0.95228 (5) | 0.66600 (10) | 0.21923 (6) | 0.01133 (15) | |
| O5 | 0.80282 (5) | 0.09628 (8) | 0.20844 (6) | 0.01843 (14) | |
| H5A | 0.8335 | 0.1329 | 0.1897 | 0.022* | |
| H5B | 0.7644 | 0.1614 | 0.1957 | 0.022* |
| Cu1 | 0.01075 (8) | 0.00986 (8) | 0.01153 (8) | 0.000 | 0.00533 (6) | 0.000 |
| O1 | 0.0162 (3) | 0.0146 (3) | 0.0136 (3) | −0.0032 (2) | 0.0099 (3) | −0.0027 (2) |
| O2 | 0.0255 (4) | 0.0255 (4) | 0.0199 (4) | −0.0116 (3) | 0.0140 (3) | −0.0098 (3) |
| O3 | 0.0209 (3) | 0.0171 (3) | 0.0184 (3) | 0.0053 (3) | 0.0079 (3) | −0.0022 (3) |
| O4 | 0.0193 (3) | 0.0250 (4) | 0.0179 (3) | 0.0082 (3) | 0.0072 (3) | −0.0017 (3) |
| N1 | 0.0152 (3) | 0.0137 (3) | 0.0149 (4) | 0.0000 (3) | 0.0092 (3) | 0.0009 (3) |
| N2 | 0.0181 (4) | 0.0255 (4) | 0.0168 (4) | 0.0038 (3) | 0.0118 (3) | 0.0035 (3) |
| N3 | 0.0119 (3) | 0.0124 (3) | 0.0118 (3) | 0.0001 (3) | 0.0058 (3) | 0.0001 (3) |
| C1 | 0.0141 (4) | 0.0121 (4) | 0.0132 (4) | 0.0018 (3) | 0.0085 (3) | 0.0013 (3) |
| C2 | 0.0149 (4) | 0.0154 (4) | 0.0132 (4) | 0.0040 (3) | 0.0082 (3) | 0.0019 (3) |
| C3 | 0.0171 (4) | 0.0257 (5) | 0.0204 (5) | 0.0016 (3) | 0.0131 (4) | 0.0045 (4) |
| C4 | 0.0156 (4) | 0.0196 (4) | 0.0184 (4) | −0.0010 (3) | 0.0099 (4) | 0.0018 (3) |
| C5 | 0.0146 (4) | 0.0134 (4) | 0.0133 (4) | −0.0003 (3) | 0.0083 (3) | −0.0002 (3) |
| C6 | 0.0178 (4) | 0.0169 (4) | 0.0133 (4) | 0.0035 (3) | 0.0101 (4) | 0.0005 (3) |
| C7 | 0.0122 (4) | 0.0142 (4) | 0.0154 (4) | −0.0007 (3) | 0.0060 (3) | −0.0004 (3) |
| C8 | 0.0120 (4) | 0.0171 (4) | 0.0162 (4) | 0.0008 (3) | 0.0054 (3) | −0.0010 (3) |
| C9 | 0.0138 (4) | 0.0149 (4) | 0.0171 (4) | 0.0027 (3) | 0.0057 (3) | −0.0008 (3) |
| C10 | 0.0144 (4) | 0.0122 (4) | 0.0153 (4) | 0.0006 (3) | 0.0067 (3) | −0.0010 (3) |
| C11 | 0.0114 (4) | 0.0126 (4) | 0.0100 (4) | 0.0000 (3) | 0.0057 (3) | 0.0003 (3) |
| O5 | 0.0213 (3) | 0.0156 (3) | 0.0244 (4) | 0.0041 (3) | 0.0163 (3) | 0.0056 (3) |
| Cu1—O1 | 1.9880 (7) | C2—C6 | 1.5117 (14) |
| Cu1—N3 | 2.0085 (8) | C3—C4 | 1.3940 (15) |
| Cu1—N1 | 2.3565 (8) | C3—H3A | 0.9500 |
| O1—C5 | 1.2890 (11) | C4—H4A | 0.9500 |
| O2—C5 | 1.2243 (12) | C7—C8 | 1.3869 (13) |
| O3—C6 | 1.3072 (12) | C7—H7A | 0.9500 |
| O3—H3O | 0.8844 | C8—C9 | 1.3903 (13) |
| O4—C6 | 1.2142 (12) | C8—H8A | 0.9500 |
| N1—C1 | 1.3340 (12) | C9—C10 | 1.3886 (13) |
| N1—C4 | 1.3386 (12) | C9—H9A | 0.9500 |
| N2—C3 | 1.3362 (15) | C10—C11 | 1.3904 (13) |
| N2—C2 | 1.3388 (12) | C10—H10A | 0.9500 |
| N3—C7 | 1.3446 (11) | C11—C11i | 1.4754 (17) |
| N3—C11 | 1.3496 (12) | O5—H5A | 0.8419 |
| C1—C2 | 1.4012 (13) | O5—H5B | 0.8612 |
| C1—C5 | 1.5169 (12) | ||
| O1—Cu1—O1i | 93.03 (4) | C4—C3—H3A | 118.9 |
| O1—Cu1—N3i | 166.86 (3) | N1—C4—C3 | 120.57 (10) |
| O1—Cu1—N3 | 94.19 (3) | N1—C4—H4A | 119.7 |
| O1i—Cu1—N3 | 166.86 (3) | C3—C4—H4A | 119.7 |
| N3i—Cu1—N3 | 80.95 (4) | O2—C5—O1 | 125.49 (9) |
| O1—Cu1—N1i | 91.84 (3) | O2—C5—C1 | 118.30 (8) |
| N3—Cu1—N1i | 92.57 (3) | O1—C5—C1 | 116.20 (8) |
| O1—Cu1—N1 | 76.24 (3) | O4—C6—O3 | 124.67 (10) |
| N3—Cu1—N1 | 100.53 (3) | O4—C6—C2 | 121.68 (9) |
| N1i—Cu1—N1 | 162.80 (4) | O3—C6—C2 | 113.34 (8) |
| C5—O1—Cu1 | 122.13 (6) | N3—C7—C8 | 122.08 (9) |
| C6—O3—H3O | 109.2 | N3—C7—H7A | 119.0 |
| C1—N1—C4 | 118.00 (9) | C8—C7—H7A | 119.0 |
| C1—N1—Cu1 | 107.29 (6) | C7—C8—C9 | 118.61 (9) |
| C4—N1—Cu1 | 134.12 (7) | C7—C8—H8A | 120.7 |
| C3—N2—C2 | 116.72 (9) | C9—C8—H8A | 120.7 |
| C7—N3—C11 | 119.40 (8) | C10—C9—C8 | 119.48 (9) |
| C7—N3—Cu1 | 125.73 (6) | C10—C9—H9A | 120.3 |
| C11—N3—Cu1 | 114.69 (6) | C8—C9—H9A | 120.3 |
| N1—C1—C2 | 120.85 (8) | C9—C10—C11 | 118.84 (9) |
| N1—C1—C5 | 117.05 (8) | C9—C10—H10A | 120.6 |
| C2—C1—C5 | 122.07 (8) | C11—C10—H10A | 120.6 |
| N2—C2—C1 | 121.62 (9) | N3—C11—C10 | 121.57 (8) |
| N2—C2—C6 | 113.75 (8) | N3—C11—C11i | 114.75 (5) |
| C1—C2—C6 | 124.57 (8) | C10—C11—C11i | 123.67 (5) |
| N2—C3—C4 | 122.22 (9) | H5A—O5—H5B | 104.5 |
| N2—C3—H3A | 118.9 | ||
| O1i—Cu1—O1—C5 | −96.65 (7) | C3—N2—C2—C6 | 177.66 (9) |
| N3i—Cu1—O1—C5 | 26.65 (17) | N1—C1—C2—N2 | 0.90 (14) |
| N3—Cu1—O1—C5 | 94.33 (7) | C5—C1—C2—N2 | −177.34 (9) |
| N1i—Cu1—O1—C5 | −172.96 (7) | N1—C1—C2—C6 | −175.91 (9) |
| N1—Cu1—O1—C5 | −5.49 (7) | C5—C1—C2—C6 | 5.84 (14) |
| O1—Cu1—N1—C1 | 8.79 (6) | C2—N2—C3—C4 | −1.13 (15) |
| O1i—Cu1—N1—C1 | 101.46 (6) | C1—N1—C4—C3 | 1.09 (14) |
| N3i—Cu1—N1—C1 | −164.26 (6) | Cu1—N1—C4—C3 | −168.92 (7) |
| N3—Cu1—N1—C1 | −82.99 (6) | N2—C3—C4—N1 | 0.34 (16) |
| N1i—Cu1—N1—C1 | 55.98 (14) | Cu1—O1—C5—O2 | −179.47 (8) |
| O1—Cu1—N1—C4 | 179.57 (10) | Cu1—O1—C5—C1 | 1.41 (11) |
| O1i—Cu1—N1—C4 | −87.76 (10) | N1—C1—C5—O2 | −171.48 (9) |
| N3i—Cu1—N1—C4 | 6.52 (10) | C2—C1—C5—O2 | 6.83 (14) |
| N3—Cu1—N1—C4 | 87.79 (10) | N1—C1—C5—O1 | 7.71 (12) |
| N1i—Cu1—N1—C4 | −133.24 (9) | C2—C1—C5—O1 | −173.98 (9) |
| O1—Cu1—N3—C7 | 15.90 (8) | N2—C2—C6—O4 | −96.00 (11) |
| O1i—Cu1—N3—C7 | −107.29 (14) | C1—C2—C6—O4 | 81.03 (13) |
| N3i—Cu1—N3—C7 | −176.39 (10) | N2—C2—C6—O3 | 77.89 (11) |
| N1i—Cu1—N3—C7 | −76.14 (8) | C1—C2—C6—O3 | −105.07 (11) |
| N1—Cu1—N3—C7 | 92.66 (8) | C11—N3—C7—C8 | 0.14 (14) |
| O1—Cu1—N3—C11 | −169.01 (6) | Cu1—N3—C7—C8 | 175.02 (7) |
| O1i—Cu1—N3—C11 | 67.81 (15) | N3—C7—C8—C9 | 0.79 (15) |
| N3i—Cu1—N3—C11 | −1.30 (5) | C7—C8—C9—C10 | −0.57 (15) |
| N1i—Cu1—N3—C11 | 98.96 (6) | C8—C9—C10—C11 | −0.53 (15) |
| N1—Cu1—N3—C11 | −92.25 (7) | C7—N3—C11—C10 | −1.31 (13) |
| C4—N1—C1—C2 | −1.68 (14) | Cu1—N3—C11—C10 | −176.74 (7) |
| Cu1—N1—C1—C2 | 170.83 (7) | C7—N3—C11—C11i | 178.90 (9) |
| C4—N1—C1—C5 | 176.65 (8) | Cu1—N3—C11—C11i | 3.47 (12) |
| Cu1—N1—C1—C5 | −10.84 (9) | C9—C10—C11—N3 | 1.50 (14) |
| C3—N2—C2—C1 | 0.53 (14) | C9—C10—C11—C11i | −178.73 (10) |
| H··· | ||||
| O3—H3O···O5ii | 0.88 | 1.66 | 2.5390 (12) | 170 |
| O5—H5A···O1 | 0.84 | 1.89 | 2.7218 (13) | 173 |
| O5—H5B···O4iii | 0.86 | 1.84 | 2.6989 (13) | 177 |
| C7—H7A···O2iii | 0.95 | 2.57 | 3.1144 (14) | 117 |
| C8—H8A···O2iii | 0.95 | 2.45 | 3.0433 (13) | 121 |
| C9—H9A···O5iv | 0.95 | 2.55 | 3.2168 (13) | 127 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3O⋯O5i | 0.88 | 1.66 | 2.5390 (12) | 170 |
| O5—H5 | 0.84 | 1.89 | 2.7218 (13) | 173 |
| O5—H5 | 0.86 | 1.84 | 2.6989 (13) | 177 |
| C7—H7 | 0.95 | 2.57 | 3.1144 (14) | 117 |
| C8—H8 | 0.95 | 2.45 | 3.0433 (13) | 121 |
| C9—H9 | 0.95 | 2.55 | 3.2168 (13) | 127 |
Symmetry codes: (i) ; (ii) ; (iii) .