Literature DB >> 21200473

{2-Bromo-4-chloro-6-[2-(diethyl-amino)ethyl-imino-meth-yl]phenolato-κN,N',O}(thio-cyanato-κN)copper(II).

Xian-Wen Li, Yang Qiu.   

Abstract

In the title compound, [Cu(C(13)H(17)BrClN(2)O)(NCS)], the Cu atom is in a slightly distorted square-planar geometry, coordinated by the three donor atoms of the ligand and the N atom of the isothio-cyanate group.

Entities:  

Year:  2007        PMID: 21200473      PMCID: PMC2915066          DOI: 10.1107/S1600536807063908

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of Schiff base compounds, see: Panneerselvam et al. (2005 ▶); Shi et al. (2007 ▶); Singh et al. (2006 ▶, 2007 ▶); Zhong et al. (2006 ▶).

Experimental

Crystal data

[Cu(C13H17BrClN2O)(NCS)] M = 454.27 Monoclinic, a = 8.651 (2) Å b = 14.137 (2) Å c = 14.145 (2) Å β = 90.820 (2)° V = 1729.7 (5) Å3 Z = 4 Mo Kα radiation μ = 3.85 mm−1 T = 293 (2) K 0.17 × 0.13 × 0.13 mm

Data collection

Bruker SMART 1K CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.561, T max = 0.634 14228 measured reflections 3745 independent reflections 2784 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.123 S = 1.04 3745 reflections 201 parameters H-atom parameters constrained Δρmax = 1.22 e Å−3 Δρmin = −0.92 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2001 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807063908/sg2212sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807063908/sg2212Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C13H17BrClN2O)(NCS)]F000 = 908
Mr = 454.27Dx = 1.744 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
a = 8.651 (2) ÅCell parameters from 3721 reflections
b = 14.137 (2) Åθ = 2.5–25.3º
c = 14.145 (2) ŵ = 3.85 mm1
β = 90.820 (2)ºT = 293 (2) K
V = 1729.7 (5) Å3Block, blue
Z = 40.17 × 0.13 × 0.13 mm
Bruker SMART 1K CCD area-detector diffractometer3745 independent reflections
Radiation source: fine-focus sealed tube2784 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.039
T = 293(2) Kθmax = 27.0º
ω scansθmin = 2.0º
Absorption correction: multi-scan(SADABS; Sheldrick, 2004)h = −11→10
Tmin = 0.561, Tmax = 0.634k = −18→17
14228 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.123  w = 1/[σ2(Fo2) + (0.0599P)2 + 1.7229P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
3745 reflectionsΔρmax = 1.22 e Å3
201 parametersΔρmin = −0.92 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.13650 (6)0.16708 (3)0.07012 (3)0.03921 (16)
O1−0.0067 (4)0.2249 (2)−0.0153 (2)0.0503 (8)
N10.1195 (4)0.2692 (3)0.1611 (2)0.0424 (8)
N20.3230 (4)0.1260 (3)0.1541 (2)0.0436 (8)
N30.1631 (4)0.0684 (3)−0.0241 (3)0.0478 (9)
Br1−0.22122 (6)0.25006 (4)−0.17829 (3)0.05842 (18)
Cl1−0.33341 (16)0.58720 (9)0.00426 (11)0.0698 (4)
S10.10508 (13)−0.05745 (9)−0.17046 (8)0.0502 (3)
C1−0.0783 (5)0.3037 (3)−0.0054 (3)0.0410 (9)
C2−0.0611 (5)0.3662 (3)0.0729 (3)0.0422 (9)
C3−0.1405 (5)0.4526 (3)0.0746 (3)0.0518 (11)
H3−0.12690.49320.12580.062*
C4−0.2375 (5)0.4777 (3)0.0021 (3)0.0530 (11)
C5−0.2594 (5)0.4179 (4)−0.0741 (3)0.0520 (11)
H5−0.32590.4352−0.12340.062*
C6−0.1840 (5)0.3339 (3)−0.0770 (3)0.0423 (9)
C70.0380 (5)0.3446 (3)0.1520 (3)0.0481 (11)
H70.04370.38870.20070.058*
C80.2151 (6)0.2587 (4)0.2462 (3)0.0635 (15)
H8A0.29730.30530.24630.076*
H8B0.15280.26890.30180.076*
C90.2793 (9)0.1661 (4)0.2487 (4)0.087 (2)
H9A0.20510.12390.27740.104*
H9B0.37070.16710.28910.104*
C100.3261 (6)0.0234 (3)0.1647 (4)0.0616 (13)
H10A0.3399−0.00410.10260.074*
H10B0.22570.00340.18680.074*
C110.4495 (6)−0.0183 (4)0.2313 (4)0.0676 (15)
H11A0.54910.00640.21510.101*
H11B0.4503−0.08590.22510.101*
H11C0.4265−0.00150.29530.101*
C120.4629 (7)0.1734 (6)0.1237 (5)0.098 (2)
H12A0.45000.24050.13540.118*
H12B0.54720.15190.16420.118*
C130.5091 (7)0.1627 (7)0.0301 (5)0.117 (3)
H13A0.52280.09680.01640.175*
H13B0.60490.19550.02110.175*
H13C0.43140.1885−0.01160.175*
C140.1359 (4)0.0175 (3)−0.0848 (3)0.0380 (9)
U11U22U33U12U13U23
Cu10.0451 (3)0.0384 (3)0.0339 (3)−0.0012 (2)−0.0085 (2)−0.0047 (2)
O10.069 (2)0.0402 (17)0.0409 (17)0.0084 (15)−0.0189 (14)−0.0043 (13)
N10.045 (2)0.051 (2)0.0313 (17)−0.0048 (17)−0.0055 (15)−0.0080 (15)
N20.044 (2)0.043 (2)0.0443 (19)−0.0070 (16)−0.0090 (15)0.0003 (15)
N30.051 (2)0.051 (2)0.0413 (19)0.0001 (17)−0.0050 (16)−0.0100 (17)
Br10.0689 (3)0.0642 (3)0.0418 (3)−0.0017 (2)−0.0130 (2)0.0037 (2)
Cl10.0715 (9)0.0532 (7)0.0852 (9)0.0218 (6)0.0219 (7)0.0123 (7)
S10.0508 (6)0.0547 (7)0.0451 (6)−0.0034 (5)−0.0002 (5)−0.0178 (5)
C10.043 (2)0.040 (2)0.040 (2)−0.0047 (18)0.0020 (17)0.0054 (18)
C20.042 (2)0.043 (2)0.042 (2)0.0003 (18)0.0053 (18)−0.0017 (18)
C30.058 (3)0.043 (3)0.055 (3)0.001 (2)0.012 (2)−0.003 (2)
C40.051 (3)0.048 (3)0.061 (3)0.011 (2)0.016 (2)0.010 (2)
C50.045 (3)0.059 (3)0.052 (3)0.006 (2)0.006 (2)0.016 (2)
C60.042 (2)0.047 (2)0.038 (2)−0.0041 (19)0.0026 (17)0.0073 (18)
C70.051 (3)0.050 (3)0.043 (2)−0.007 (2)0.0018 (19)−0.013 (2)
C80.055 (3)0.096 (4)0.039 (2)0.008 (3)−0.015 (2)−0.013 (2)
C90.134 (6)0.071 (4)0.055 (3)0.032 (4)−0.044 (3)−0.016 (3)
C100.054 (3)0.043 (3)0.087 (4)0.008 (2)−0.026 (3)−0.004 (2)
C110.062 (3)0.058 (3)0.082 (4)0.014 (3)−0.027 (3)0.001 (3)
C120.057 (4)0.145 (7)0.090 (5)−0.029 (4)−0.017 (3)0.032 (4)
C130.060 (4)0.196 (9)0.095 (5)−0.015 (5)0.020 (4)−0.066 (6)
C140.032 (2)0.040 (2)0.042 (2)0.0029 (17)−0.0011 (16)0.0012 (18)
Cu1—O11.902 (3)C5—C61.356 (6)
Cu1—N11.940 (3)C5—H50.9300
Cu1—N31.945 (4)C7—H70.9300
Cu1—N22.073 (3)C8—C91.422 (7)
O1—C11.283 (5)C8—H8A0.9700
N1—C71.284 (6)C8—H8B0.9700
N1—C81.458 (5)C9—H9A0.9700
N2—C121.454 (7)C9—H9B0.9700
N2—C101.457 (6)C10—C111.532 (6)
N2—C91.507 (7)C10—H10A0.9700
N3—C141.143 (5)C10—H10B0.9700
Br1—C61.884 (4)C11—H11A0.9600
Cl1—C41.757 (5)C11—H11B0.9600
S1—C141.628 (4)C11—H11C0.9600
C1—C61.421 (6)C12—C131.397 (9)
C1—C21.421 (6)C12—H12A0.9700
C2—C31.402 (6)C12—H12B0.9700
C2—C71.433 (6)C13—H13A0.9600
C3—C41.363 (6)C13—H13B0.9600
C3—H30.9300C13—H13C0.9600
C4—C51.381 (7)
O1—Cu1—N192.66 (14)C9—C8—N1109.3 (4)
O1—Cu1—N387.45 (14)C9—C8—H8A109.8
N1—Cu1—N3176.83 (16)N1—C8—H8A109.8
O1—Cu1—N2168.15 (14)C9—C8—H8B109.8
N1—Cu1—N283.93 (14)N1—C8—H8B109.8
N3—Cu1—N295.33 (15)H8A—C8—H8B108.3
C1—O1—Cu1127.9 (3)C8—C9—N2115.3 (5)
C7—N1—C8118.1 (4)C8—C9—H9A108.4
C7—N1—Cu1126.7 (3)N2—C9—H9A108.4
C8—N1—Cu1115.1 (3)C8—C9—H9B108.4
C12—N2—C10118.3 (5)N2—C9—H9B108.4
C12—N2—C9108.0 (5)H9A—C9—H9B107.5
C10—N2—C9106.7 (4)N2—C10—C11117.3 (4)
C12—N2—Cu1110.2 (3)N2—C10—H10A108.0
C10—N2—Cu1110.5 (3)C11—C10—H10A108.0
C9—N2—Cu1101.5 (3)N2—C10—H10B108.0
C14—N3—Cu1160.4 (3)C11—C10—H10B108.0
O1—C1—C6119.3 (4)H10A—C10—H10B107.2
O1—C1—C2125.4 (4)C10—C11—H11A109.5
C6—C1—C2115.3 (4)C10—C11—H11B109.5
C3—C2—C1120.6 (4)H11A—C11—H11B109.5
C3—C2—C7117.4 (4)C10—C11—H11C109.5
C1—C2—C7122.0 (4)H11A—C11—H11C109.5
C4—C3—C2120.7 (4)H11B—C11—H11C109.5
C4—C3—H3119.7C13—C12—N2118.8 (6)
C2—C3—H3119.7C13—C12—H12A107.6
C3—C4—C5120.3 (4)N2—C12—H12A107.6
C3—C4—Cl1120.1 (4)C13—C12—H12B107.6
C5—C4—Cl1119.6 (4)N2—C12—H12B107.6
C6—C5—C4119.9 (4)H12A—C12—H12B107.1
C6—C5—H5120.0C12—C13—H13A109.5
C4—C5—H5120.0C12—C13—H13B109.5
C5—C6—C1123.1 (4)H13A—C13—H13B109.5
C5—C6—Br1119.8 (3)C12—C13—H13C109.5
C1—C6—Br1117.1 (3)H13A—C13—H13C109.5
N1—C7—C2125.2 (4)H13B—C13—H13C109.5
N1—C7—H7117.4N3—C14—S1177.3 (4)
C2—C7—H7117.4
Cu1—O11.902 (3)
Cu1—N11.940 (3)
Cu1—N31.945 (4)
Cu1—N22.073 (3)
O1—Cu1—N192.66 (14)
O1—Cu1—N387.45 (14)
N1—Cu1—N3176.83 (16)
O1—Cu1—N2168.15 (14)
N1—Cu1—N283.93 (14)
N3—Cu1—N295.33 (15)
  5 in total

1.  Synthesis and characterization of cobalt(II), nickel(II), copper(II) and zinc(II) complexes with Schiff base derived from 4-amino-3-mercapto-6-methyl-5-oxo-1,2,4-triazine.

Authors:  Kiran Singh; Manjeet Singh Barwa; Parikshit Tyagi
Journal:  Eur J Med Chem       Date:  2007-01-16       Impact factor: 6.514

2.  Synthesis and antimicrobial activities of Schiff bases derived from 5-chloro-salicylaldehyde.

Authors:  Lei Shi; Hui-Ming Ge; Shu-Hua Tan; Huan-Qiu Li; Yong-Chun Song; Hai-Liang Zhu; Ren-Xiang Tan
Journal:  Eur J Med Chem       Date:  2006-11-29       Impact factor: 6.514

3.  Synthesis, characterization and biological studies of Co(II), Ni(II), Cu(II) and Zn(II) complexes with bidentate Schiff bases derived by heterocyclic ketone.

Authors:  Kiran Singh; Manjeet Singh Barwa; Parikshit Tyagi
Journal:  Eur J Med Chem       Date:  2005-11-03       Impact factor: 6.514

4.  Synthesis and crystal structure of some transition metal complexes with a novel bis-Schiff base ligand and their antitumor activities.

Authors:  X Zhong; J Yi; J Sun; H-L Wei; W-S Liu; K-B Yu
Journal:  Eur J Med Chem       Date:  2006-06-16       Impact factor: 6.514

5.  Synthesis of Schiff bases of 4-(4-aminophenyl)-morpholine as potential antimicrobial agents.

Authors:  Perumal Panneerselvam; Rajasree R Nair; Gudaparthi Vijayalakshmi; Ekambaram Harihara Subramanian; Seshaiah Krishnan Sridhar
Journal:  Eur J Med Chem       Date:  2005-02       Impact factor: 6.514

  5 in total
  1 in total

1.  {N-Methyl-N'-[1-(pyridin-2-yl)ethyl-idene]ethane-1,2-diamine-κN,N',N''}-bis(thio-cyanato-κN)zinc(II).

Authors:  Xian-Wen Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-04
  1 in total

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