Literature DB >> 21186292

Terriglobus saanensis sp. nov., an acidobacterium isolated from tundra soil.

Minna K Männistö1, Suman Rawat2, Valentin Starovoytov3, Max M Häggblom2.   

Abstract

Two aerobic bacterial strains, designated SP1PR4(T) and SP1PR5, were isolated from tundra soil samples collected from Saana fjeld, North-western Finland (69° 03' N 20° 50' E). Cells of both strains were Gram-negative, non-motile rods. Phylogenetic analysis indicated that the strains belong to the genus Terriglobus in subdivision 1 of the phylum Acidobacteria. Strains SP1PR4(T) and SP1PR5 shared identical BOX and ERIC fingerprints and 99.7 % 16S rRNA gene similarity indicating that, together with their identical physiological features, these strains are members of the same species. The 16S rRNA gene sequence similarity of SP1PR4(T) and SP1PR5 with Terriglobus roseus DSM 18391(T) was 97.1 %. A low DNA-DNA hybridization value (<20 %) and rpoB gene sequence similarity (83.6 %) with T. roseus DSM 18391(T) indicated that the tundra soil isolates represent novel members of the genus Terriglobus. Strains SP1PR4(T) and SP1PR5 grew at pH 4.5-7.5 and 4-30 °C. Sugars were the preferred growth substrates. The major cellular fatty acids were iso-C(15 : 0), C(16 : 1)ω7c, iso-C(13 : 0) and C(16 : 0). The DNA G+C content of strain SP1PR4(T) was 57.3 mol%. Based on phylogenetic, chemotaxonomic and physiological analyses, the name Terriglobus saanensis sp. nov. is proposed to accommodate the two strains; the type strain is SP1PR4(T) ( = DSM 23119(T)  = ATCC BAA-1853(T)).

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21186292     DOI: 10.1099/ijs.0.026005-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  18 in total

1.  Recovery of as-yet-uncultured soil acidobacteria on dilute solid media.

Authors:  Isabelle F George; Manuela Hartmann; Mark R Liles; Spiros N Agathos
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

2.  Diversity of bacterial communities along a petroleum contamination gradient in desert soils.

Authors:  Raeid M M Abed; Sumaiya Al-Kindi; Samiha Al-Kharusi
Journal:  Microb Ecol       Date:  2014-08-08       Impact factor: 4.552

3.  Thermotomaculum hydrothermale gen. nov., sp. nov., a novel heterotrophic thermophile within the phylum Acidobacteria from a deep-sea hydrothermal vent chimney in the Southern Okinawa Trough.

Authors:  Hiroshi Izumi; Takuro Nunoura; Masayuki Miyazaki; Sayaka Mino; Tomohiro Toki; Ken Takai; Yoshihiko Sako; Tomoo Sawabe; Satoshi Nakagawa
Journal:  Extremophiles       Date:  2012-01-03       Impact factor: 2.395

4.  Ether- and ester-bound iso-diabolic acid and other lipids in members of acidobacteria subdivision 4.

Authors:  Jaap S Sinninghe Damsté; W Irene C Rijpstra; Ellen C Hopmans; Bärbel U Foesel; Pia K Wüst; Jörg Overmann; Marcus Tank; Donald A Bryant; Peter F Dunfield; Karen Houghton; Matthew B Stott
Journal:  Appl Environ Microbiol       Date:  2014-06-13       Impact factor: 4.792

5.  Geothrix fermentans secretes two different redox-active compounds to utilize electron acceptors across a wide range of redox potentials.

Authors:  Misha G Mehta-Kolte; Daniel R Bond
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

6.  A robust PCR primer design platform applied to the detection of Acidobacteria Group 1 in soil.

Authors:  Jason D Gans; John Dunbar; Stephanie A Eichorst; La Verne Gallegos-Graves; Murray Wolinsky; Cheryl R Kuske
Journal:  Nucleic Acids Res       Date:  2012-03-20       Impact factor: 16.971

7.  Mobile genetic elements in the bacterial phylum Acidobacteria.

Authors:  Jean Challacombe; Cheryl Kuske
Journal:  Mob Genet Elements       Date:  2012-07-01

8.  Complete genome sequence of Terriglobus saanensis type strain SP1PR4(T), an Acidobacteria from tundra soil.

Authors:  Suman R Rawat; Minna K Männistö; Valentin Starovoytov; Lynne Goodwin; Matt Nolan; Lauren Hauser; Miriam Land; Karen Walston Davenport; Tanja Woyke; Max M Häggblom
Journal:  Stand Genomic Sci       Date:  2012-09-26

9.  Oligotyping reveals stronger relationship of organic soil bacterial community structure with N-amendments and soil chemistry in comparison to that of mineral soil at Harvard Forest, MA, USA.

Authors:  Swathi A Turlapati; Rakesh Minocha; Stephanie Long; Jordan Ramsdell; Subhash C Minocha
Journal:  Front Microbiol       Date:  2015-02-16       Impact factor: 5.640

10.  Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon.

Authors:  Acacio A Navarrete; Andressa M Venturini; Kyle M Meyer; Ann M Klein; James M Tiedje; Brendan J M Bohannan; Klaus Nüsslein; Siu M Tsai; Jorge L M Rodrigues
Journal:  Front Microbiol       Date:  2015-12-22       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.