Literature DB >> 21183676

Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1.

Miguel A Matilla1, Paloma Pizarro-Tobias, Amalia Roca, Matilde Fernández, Estrella Duque, Lázaro Molina, Xiao Wu, Daniel van der Lelie, Manuel J Gómez, Ana Segura, Juan-Luis Ramos.   

Abstract

We report the complete sequence of the 5.7-Mbp genome of Pseudomonas putida BIRD-1, a metabolically versatile plant growth-promoting rhizobacterium that is highly tolerant to desiccation and capable of solubilizing inorganic phosphate and iron and of synthesizing phytohormones that stimulate seed germination and plant growth.

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Mesh：

Year:  2010        PMID： 21183676      PMCID： PMC3067593          DOI： 10.1128/JB.01281-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  4 in total

Review 1.  Plant-growth-promoting rhizobacteria.

Authors:  Ben Lugtenberg; Faina Kamilova
Journal:  Annu Rev Microbiol       Date:  2009       Impact factor: 15.500

2.  Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library.

Authors:  M Antonia Molina-Henares; Jesús de la Torre; Adela García-Salamanca; A Jesús Molina-Henares; M Carmen Herrera; Juan L Ramos; Estrella Duque
Journal:  Environ Microbiol       Date:  2010-02-11       Impact factor: 5.491

3.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Authors:  K E Nelson; C Weinel; I T Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; M Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; O White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; H Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; J A Eisen; K N Timmis; A Düsterhöft; B Tümmler; C M Fraser
Journal:  Environ Microbiol       Date:  2002-12       Impact factor: 5.491

Review 4.  Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida.

Authors:  Xiao Wu; Sébastien Monchy; Safiyh Taghavi; Wei Zhu; Juan Ramos; Daniel van der Lelie
Journal:  FEMS Microbiol Rev       Date:  2011-03       Impact factor: 16.408
  4 in total
  16 in total

1.  Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440.

Authors:  Matilde Fernández; Susana Conde; Jesús de la Torre; Carlos Molina-Santiago; Juan-Luis Ramos; Estrella Duque
Journal:  Antimicrob Agents Chemother       Date:  2011-12-05       Impact factor: 5.191

Review 2.  Biotechnological domestication of pseudomonads using synthetic biology.

Authors:  Pablo I Nikel; Esteban Martínez-García; Víctor de Lorenzo
Journal:  Nat Rev Microbiol       Date:  2014-05       Impact factor: 60.633

3.  Stability of a Pseudomonas putida KT2440 bacteriophage-carried genomic island and its impact on rhizosphere fitness.

Authors:  Jose M Quesada; María Isabel Soriano; Manuel Espinosa-Urgel
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

Review 4.  Pseudomonas putida and its close relatives: mixing and mastering the perfect tune for plants.

Authors:  Stefanie Bernardette Costa-Gutierrez; Conrado Adler; Manuel Espinosa-Urgel; Ricardo Ezequiel de Cristóbal
Journal:  Appl Microbiol Biotechnol       Date:  2022-04-30       Impact factor: 5.560

5.  Unearthing the genomes of plant-beneficial Pseudomonas model strains WCS358, WCS374 and WCS417.

Authors:  Roeland L Berendsen; Marcel C van Verk; Ioannis A Stringlis; Christos Zamioudis; Jan Tommassen; Corné M J Pieterse; Peter A H M Bakker
Journal:  BMC Genomics       Date:  2015-07-22       Impact factor: 3.969

6.  Genome features of Pseudomonas putida LS46, a novel polyhydroxyalkanoate producer and its comparison with other P. putida strains.

Authors:  Parveen K Sharma; Jilagamazhi Fu; Xiangli Zhang; Brian Fristensky; Richard Sparling; David B Levin
Journal:  AMB Express       Date:  2014-05-22       Impact factor: 3.298

7.  The complete genome sequence of the plant growth-promoting bacterium Pseudomonas sp. UW4.

Authors:  Jin Duan; Wei Jiang; Zhenyu Cheng; John J Heikkila; Bernard R Glick
Journal:  PLoS One       Date:  2013-03-13       Impact factor: 3.240

8.  tyrB-2 and phhC genes of Pseudomonas putida encode aromatic amino acid aminotransferase isozymes: evidence at the protein level.

Authors:  Michał Szkop; Wiesław Bielawski
Journal:  Amino Acids       Date:  2013-05-19       Impact factor: 3.520

9.  Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease.

Authors:  Honour C McCann; Erik H A Rikkerink; Frederic Bertels; Mark Fiers; Ashley Lu; Jonathan Rees-George; Mark T Andersen; Andrew P Gleave; Bernhard Haubold; Mark W Wohlers; David S Guttman; Pauline W Wang; Christina Straub; Joel L Vanneste; Joel Vanneste; Paul B Rainey; Matthew D Templeton
Journal:  PLoS Pathog       Date:  2013-07-25       Impact factor: 6.823

10.  Whole genome sequencing and analysis of plant growth promoting bacteria isolated from the rhizosphere of plantation crops coconut, cocoa and arecanut.

Authors:  Alka Gupta; Murali Gopal; George V Thomas; Vinu Manikandan; John Gajewski; George Thomas; Somasekar Seshagiri; Stephan C Schuster; Preeti Rajesh; Ravi Gupta
Journal:  PLoS One       Date:  2014-08-27       Impact factor: 3.240
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