Literature DB >> 21175773

Rapid detection of Lassa virus by reverse transcription-loop-mediated isothermal amplification.

Aiko Fukuma1, Yohei Kurosaki, Yuko Morikawa, Allen Grolla, Heinz Feldmann, Jiro Yasuda.   

Abstract

In this study, a simple one-step reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for rapid detection of Lassa virus (LASV) was established. The two primer sets were designed to detect LASV circulating in Sierra Leone and northeastern Nigeria. The RT-LAMP assay using these primer sets was able to detect 100 copies of the in vitro transcribed artificial LASV RNA within 25 min. The assay was also evaluated using intact viral RNA extracted from cell culture-propagated viruses and confirmed to be highly specific for LASV. The RT-LAMP assay developed in this study is rapid, simple, and highly specific for the detection of LASV, although its sensitivity is slightly lower than that of real-time RT-PCR. In addition, because the RT-LAMP assay does not require the use of sophisticated equipment, it would be advantageous for clinical diagnosis of LASV infection in developing countries. It might also be employed in cases of deliberate release during bioterrorism attacks or in epidemiological surveillance for disease outbreaks.
© 2010 The Societies and Blackwell Publishing Asia Pty Ltd.

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Year:  2011        PMID: 21175773      PMCID: PMC3406174          DOI: 10.1111/j.1348-0421.2010.00286.x

Source DB:  PubMed          Journal:  Microbiol Immunol        ISSN: 0385-5600            Impact factor:   1.955


  23 in total

1.  Diagnosis and clinical virology of Lassa fever as evaluated by enzyme-linked immunosorbent assay, indirect fluorescent-antibody test, and virus isolation.

Authors:  D G Bausch; P E Rollin; A H Demby; M Coulibaly; J Kanu; A S Conteh; K D Wagoner; L K McMullan; M D Bowen; C J Peters; T G Ksiazek
Journal:  J Clin Microbiol       Date:  2000-07       Impact factor: 5.948

2.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

Review 3.  Molecular diagnostics of viral hemorrhagic fevers.

Authors:  Christian Drosten; Beate M Kümmerer; Herbert Schmitz; Stephan Günther
Journal:  Antiviral Res       Date:  2003-01       Impact factor: 5.970

4.  Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of West Nile virus.

Authors:  Manmohan Parida; Guillermo Posadas; Shingo Inoue; Futoshi Hasebe; Kouichi Morita
Journal:  J Clin Microbiol       Date:  2004-01       Impact factor: 5.948

5.  Accelerated reaction by loop-mediated isothermal amplification using loop primers.

Authors:  K Nagamine; T Hase; T Notomi
Journal:  Mol Cell Probes       Date:  2002-06       Impact factor: 2.365

6.  Sequence analysis of L RNA of Lassa virus.

Authors:  Simon Vieth; Andrew E Torda; Marcel Asper; Herbert Schmitz; Stephan Günther
Journal:  Virology       Date:  2004-01-05       Impact factor: 3.616

7.  Development and evaluation of a simple assay for Marburg virus detection using a reverse transcription-loop-mediated isothermal amplification method.

Authors:  Yohei Kurosaki; Allen Grolla; Aiko Fukuma; Heinz Feldmann; Jiro Yasuda
Journal:  J Clin Microbiol       Date:  2010-04-26       Impact factor: 5.948

8.  Genetic diversity among Lassa virus strains.

Authors:  M D Bowen; P E Rollin; T G Ksiazek; H L Hustad; D G Bausch; A H Demby; M D Bajani; C J Peters; S T Nichol
Journal:  J Virol       Date:  2000-08       Impact factor: 5.103

9.  Imported lassa fever in Germany: molecular characterization of a new lassa virus strain.

Authors:  S Günther; P Emmerich; T Laue; O Kühle; M Asper; A Jung; T Grewing; J ter Meulen; H Schmitz
Journal:  Emerg Infect Dis       Date:  2000 Sep-Oct       Impact factor: 6.883

10.  Rapid detection and quantification of RNA of Ebola and Marburg viruses, Lassa virus, Crimean-Congo hemorrhagic fever virus, Rift Valley fever virus, dengue virus, and yellow fever virus by real-time reverse transcription-PCR.

Authors:  Christian Drosten; Stephan Göttig; Stefan Schilling; Marcel Asper; Marcus Panning; Herbert Schmitz; Stephan Günther
Journal:  J Clin Microbiol       Date:  2002-07       Impact factor: 5.948

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  4 in total

Review 1.  Recent advances in lab-on-a-chip technologies for viral diagnosis.

Authors:  Hanliang Zhu; Zdenka Fohlerová; Jan Pekárek; Evgenia Basova; Pavel Neužil
Journal:  Biosens Bioelectron       Date:  2020-01-22       Impact factor: 10.618

2.  Development of an RT-LAMP Assay for the Rapid Detection of SFTS Virus.

Authors:  Shiori Sano; Shuetsu Fukushi; Souichi Yamada; Shizuko Harada; Hitomi Kinoshita; Satoko Sugimoto; Tomoki Yoshikawa; Takeshi Kurosu; Yuki Takamatsu; Masayuki Shimojima; Shoichi Toda; Yuka Hamada; Naoki Fujisawa; Takayuki Sugimoto; Masayuki Saijo
Journal:  Viruses       Date:  2021-04-16       Impact factor: 5.048

3.  A novel multiplex isothermal amplification method for rapid detection and identification of viruses.

Authors:  Dougbeh-Chris Nyan; Kevin L Swinson
Journal:  Sci Rep       Date:  2015-12-08       Impact factor: 4.379

Review 4.  Baseline mapping of Lassa fever virology, epidemiology and vaccine research and development.

Authors:  Hoai J Hallam; Steven Hallam; Sergio E Rodriguez; Alan D T Barrett; David W C Beasley; Arlene Chua; Thomas G Ksiazek; Gregg N Milligan; Vaseeharan Sathiyamoorthy; Lisa M Reece
Journal:  NPJ Vaccines       Date:  2018-03-20       Impact factor: 7.344

  4 in total

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