Literature DB >> 21169418

Systematic screen of Schizosaccharomyces pombe deletion collection uncovers parallel evolution of the phosphate signal transduction pathway in yeasts.

Theresa C Henry1, Juliette E Power, Christine L Kerwin, Aishat Mohammed, Jonathan S Weissman, Dale M Cameron, Dennis D Wykoff.   

Abstract

The phosphate signal transduction (PHO) pathway, which regulates genes in response to phosphate starvation, is well defined in Saccharomyces cerevisiae. We asked whether the PHO pathway was the same in the distantly related fission yeast Schizosaccharomyces pombe. We screened a deletion collection for mutants aberrant in phosphatase activity, which is primarily a consequence of pho1(+) transcription. We identified a novel zinc finger-containing protein (encoded by spbc27b12.11c(+)), which we have named pho7(+), that is essential for pho1(+) transcriptional induction during phosphate starvation. Few of the S. cerevisiae genes involved in the PHO pathway appear to be involved in the regulation of the phosphate starvation response in S. pombe. Only the most upstream genes in the PHO pathway in S. cerevisiae (ADO1, DDP1, and PPN1) share a similar role in both yeasts. Because ADO1 and DDP1 regulate ATP and IP(7) levels, we hypothesize that the ancestor of these yeasts must have sensed similar metabolites in response to phosphate starvation but have evolved distinct mechanisms in parallel to sense these metabolites and induce phosphate starvation genes.

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Year:  2010        PMID: 21169418      PMCID: PMC3067400          DOI: 10.1128/EC.00216-10

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  35 in total

1.  Multi-site phosphorylation of Pho4 by the cyclin-CDK Pho80-Pho85 is semi-processive with site preference.

Authors:  D A Jeffery; M Springer; D S King; E K O'Shea
Journal:  J Mol Biol       Date:  2001-03-09       Impact factor: 5.469

Review 2.  The origin and evolution of model organisms.

Authors:  S Blair Hedges
Journal:  Nat Rev Genet       Date:  2002-11       Impact factor: 53.242

3.  Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.

Authors:  Dong-Uk Kim; Jacqueline Hayles; Dongsup Kim; Valerie Wood; Han-Oh Park; Misun Won; Hyang-Sook Yoo; Trevor Duhig; Miyoung Nam; Georgia Palmer; Sangjo Han; Linda Jeffery; Seung-Tae Baek; Hyemi Lee; Young Sam Shim; Minho Lee; Lila Kim; Kyung-Sun Heo; Eun Joo Noh; Ah-Reum Lee; Young-Joo Jang; Kyung-Sook Chung; Shin-Jung Choi; Jo-Young Park; Youngwoo Park; Hwan Mook Kim; Song-Kyu Park; Hae-Joon Park; Eun-Jung Kang; Hyong Bai Kim; Hyun-Sam Kang; Hee-Moon Park; Kyunghoon Kim; Kiwon Song; Kyung Bin Song; Paul Nurse; Kwang-Lae Hoe
Journal:  Nat Biotechnol       Date:  2010-05-16       Impact factor: 54.908

4.  Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas.

Authors:  D D Wykoff; A R Grossman; D P Weeks; H Usuda; K Shimogawara
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

5.  Regulation of chromatin remodeling by inositol polyphosphates.

Authors:  David J Steger; Elizabeth S Haswell; Aimee L Miller; Susan R Wente; Erin K O'Shea
Journal:  Science       Date:  2002-11-14       Impact factor: 47.728

6.  A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae.

Authors:  V Rubio; F Linhares; R Solano; A C Martín; J Iglesias; A Leyva; J Paz-Ares
Journal:  Genes Dev       Date:  2001-08-15       Impact factor: 11.361

7.  Isolation and characterization of mutants constitutive for expression of the fbp1 gene of Schizosaccharomyces pombe.

Authors:  C S Hoffman; F Winston
Journal:  Genetics       Date:  1990-04       Impact factor: 4.562

8.  Cloning and characterization of two genes restoring acid phosphatase activity in pho1- mutants of Schizosaccharomyces pombe.

Authors:  K Maundrell; P Nurse; F Schönholzer; M E Schweingruber
Journal:  Gene       Date:  1985       Impact factor: 3.688

9.  Functional genomics of adhesion, invasion, and mycelial formation in Schizosaccharomyces pombe.

Authors:  James Dodgson; Hema Avula; Kwang-Lae Hoe; Dong-Uk Kim; Han-Oh Park; Jacqueline Hayles; John Armstrong
Journal:  Eukaryot Cell       Date:  2009-06-19

10.  Candida glabrata PHO4 is necessary and sufficient for Pho2-independent transcription of phosphate starvation genes.

Authors:  Christine L Kerwin; Dennis D Wykoff
Journal:  Genetics       Date:  2009-03-30       Impact factor: 4.562

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  24 in total

Review 1.  Conservation of PHO pathway in ascomycetes and the role of Pho84.

Authors:  Parul Tomar; Himanshu Sinha
Journal:  J Biosci       Date:  2014-06       Impact factor: 1.826

2.  Dissection of the PHO pathway in Schizosaccharomyces pombe using epistasis and the alternate repressor adenine.

Authors:  Molly Estill; Christine L Kerwin-Iosue; Dennis D Wykoff
Journal:  Curr Genet       Date:  2014-12-30       Impact factor: 3.886

3.  Structure of Fission Yeast Transcription Factor Pho7 Bound to pho1 Promoter DNA and Effect of Pho7 Mutations on DNA Binding and Phosphate Homeostasis.

Authors:  Angad Garg; Yehuda Goldgur; Ana M Sanchez; Beate Schwer; Stewart Shuman
Journal:  Mol Cell Biol       Date:  2019-06-13       Impact factor: 4.272

4.  RNA polymerase II CTD interactome with 3' processing and termination factors in fission yeast and its impact on phosphate homeostasis.

Authors:  Ana M Sanchez; Stewart Shuman; Beate Schwer
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-24       Impact factor: 11.205

5.  Individual letters of the RNA polymerase II CTD code govern distinct gene expression programs in fission yeast.

Authors:  Beate Schwer; Danny Asher Bitton; Ana M Sanchez; Jürg Bähler; Stewart Shuman
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-03       Impact factor: 11.205

6.  A long noncoding (lnc)RNA governs expression of the phosphate transporter Pho84 in fission yeast and has cascading effects on the flanking prt lncRNA and pho1 genes.

Authors:  Angad Garg; Ana M Sanchez; Stewart Shuman; Beate Schwer
Journal:  J Biol Chem       Date:  2018-02-02       Impact factor: 5.157

7.  Genetic screen for suppression of transcriptional interference identifies a gain-of-function mutation in Pol2 termination factor Seb1.

Authors:  Beate Schwer; Angad Garg; Agata Jacewicz; Stewart Shuman
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-17       Impact factor: 11.205

8.  Genome-wide characterization of the phosphate starvation response in Schizosaccharomyces pombe.

Authors:  Ian Carter-O'Connell; Michael T Peel; Dennis D Wykoff; Erin K O'Shea
Journal:  BMC Genomics       Date:  2012-12-12       Impact factor: 3.969

9.  RNA polymerase II CTD phospho-sites Ser5 and Ser7 govern phosphate homeostasis in fission yeast.

Authors:  Beate Schwer; Ana M Sanchez; Stewart Shuman
Journal:  RNA       Date:  2015-08-11       Impact factor: 4.942

10.  A new phosphate-starvation response in fission yeast requires the endocytic function of myosin I.

Authors:  Edoardo Petrini; Victoire Baillet; Jake Cridge; Cassandra J Hogan; Cindy Guillaume; Huiling Ke; Elisa Brandetti; Simon Walker; Hashem Koohy; Mikhail Spivakov; Patrick Varga-Weisz
Journal:  J Cell Sci       Date:  2015-09-07       Impact factor: 5.285

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