Literature DB >> 21164712

Compressed sensing in diffuse optical tomography.

Mehmet Süzen1, Alexia Giannoula, Turgut Durduran.   

Abstract

Diffuse optical tomography (DOT) allows tomographic (3D), non-invasive reconstructions of tissue optical properties for biomedical applications. Severe under-sampling is a common problem in DOT which leads to image artifacts. A large number of measurements is needed in order to minimize these artifacts. In this work, we introduce a compressed sensing (CS) framework for DOT which enables improved reconstructions with under-sampled data. The CS framework uses a sparsifying basis, ℓ1-regularization and random sampling to reduce the number of measurements that are needed to achieve a certain accuracy. We demonstrate the utility of the CS framework using numerical simulations. The CS results show improved DOT results in comparison to "traditional" linear reconstruction methods based on singular-value decomposition (SVD) with ℓ2-regularization and with regular and random sampling. Furthermore, CS is shown to be more robust against the reduction of measurements in comparison to the other methods. Potential benefits and shortcomings of the CS approach in the context of DOT are discussed.

Entities:  

Year:  2010        PMID: 21164712     DOI: 10.1364/OE.18.023676

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  16 in total

1.  Quantification and normalization of noise variance with sparsity regularization to enhance diffuse optical tomography.

Authors:  Jixing Yao; Fenghua Tian; Yothin Rakvongthai; Soontorn Oraintara; Hanli Liu
Journal:  Biomed Opt Express       Date:  2015-07-20       Impact factor: 3.732

2.  Simulation study on compressive laminar optical tomography for cardiac action potential propagation.

Authors:  Takumi Harada; Naoki Tomii; Shota Manago; Etsuko Kobayashi; Ichiro Sakuma
Journal:  Biomed Opt Express       Date:  2017-03-24       Impact factor: 3.732

3.  Compressed single pixel imaging in the spatial frequency domain.

Authors:  Mohammad Torabzadeh; Il-Yong Park; Randy A Bartels; Anthony J Durkin; Bruce J Tromberg
Journal:  J Biomed Opt       Date:  2017-03-01       Impact factor: 3.170

4.  L(p) regularization for early gate fluorescence molecular tomography.

Authors:  Lingling Zhao; He Yang; Wenxiang Cong; Ge Wang; Xavier Intes
Journal:  Opt Lett       Date:  2014-07-15       Impact factor: 3.776

5.  Novel l 2,1-norm optimization method for fluorescence molecular tomography reconstruction.

Authors:  Shixin Jiang; Jie Liu; Yu An; Guanglei Zhang; Jinzuo Ye; Yamin Mao; Kunshan He; Chongwei Chi; Jie Tian
Journal:  Biomed Opt Express       Date:  2016-05-23       Impact factor: 3.732

6.  Optical tomographic imaging for breast cancer detection.

Authors:  Wenxiang Cong; Xavier Intes; Ge Wang
Journal:  J Biomed Opt       Date:  2017-09       Impact factor: 3.170

7.  Sparse OCT: Optimizing compressed sensing in spectral domain optical coherence tomography.

Authors:  Xuan Liu; Jin U Kang
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-02-10

8.  High-resolution mesoscopic fluorescence molecular tomography based on compressive sensing.

Authors:  Fugang Yang; Mehmet S Ozturk; Lingling Zhao; Wenxiang Cong; Ge Wang; Xavier Intes
Journal:  IEEE Trans Biomed Eng       Date:  2014-08-15       Impact factor: 4.538

9.  Volumetric CT with sparse detector arrays (and application to Si-strip photon counters).

Authors:  A Sisniega; W Zbijewski; J W Stayman; J Xu; K Taguchi; E Fredenberg; Mats Lundqvist; J H Siewerdsen
Journal:  Phys Med Biol       Date:  2015-11-27       Impact factor: 3.609

10.  Mesoscopic Fluorescence Molecular Tomography for Evaluating Engineered Tissues.

Authors:  Mehmet S Ozturk; Chao-Wei Chen; Robin Ji; Lingling Zhao; Bao-Ngoc B Nguyen; John P Fisher; Yu Chen; Xavier Intes
Journal:  Ann Biomed Eng       Date:  2015-12-08       Impact factor: 3.934

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