Literature DB >> 21158740

E2s: structurally economical and functionally replete.

Dawn M Wenzel1, Kate E Stoll, Rachel E Klevit.   

Abstract

Ubiquitination is a post-translational modification pathway involved in myriad cellular regulation and disease pathways. The Ub (ubiquitin) transfer cascade requires three enzyme activities: a Ub-activating (E1) enzyme, a Ub-conjugating (E2) enzyme, and a Ub ligase (E3). Because the E2 is responsible both for E3 selection and substrate modification, E2s function at the heart of the Ub transfer pathway and are responsible for much of the diversity of Ub cellular signalling. There are currently over 90 three-dimensional structures for E2s, both alone and in complex with protein binding partners, providing a wealth of information regarding how E2s are recognized by a wide variety of proteins. In the present review, we describe the prototypical E2-E3 interface and discuss limitations of current methods to identify cognate E2-E3 partners. We present non-canonical E2-protein interactions and highlight the economy of E2s in their ability to facilitate many protein-protein interactions at nearly every surface on their relatively small and compact catalytic domain. Lastly, we compare the structures of conjugated E2~Ub species, their unique protein interactions and the mechanistic insights provided by species that are poised to transfer Ub.

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Year:  2011        PMID: 21158740      PMCID: PMC3118098          DOI: 10.1042/BJ20100985

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  89 in total

1.  The E2-E3 interaction in the N-end rule pathway: the RING-H2 finger of E3 is required for the synthesis of multiubiquitin chain.

Authors:  Y Xie; A Varshavsky
Journal:  EMBO J       Date:  1999-12-01       Impact factor: 11.598

2.  Molecular insights into polyubiquitin chain assembly: crystal structure of the Mms2/Ubc13 heterodimer.

Authors:  A P VanDemark; R M Hofmann; C Tsui; C M Pickart; C Wolberger
Journal:  Cell       Date:  2001-06-15       Impact factor: 41.582

3.  Structural and functional analysis of the human mitotic-specific ubiquitin-conjugating enzyme, UbcH10.

Authors:  Yaqiong Lin; William C Hwang; Ravi Basavappa
Journal:  J Biol Chem       Date:  2002-04-01       Impact factor: 5.157

4.  Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex.

Authors:  Thomas K Albert; Hiroyuki Hanzawa; Yvonne I A Legtenberg; Marjolein J de Ruwe; Fiona A J van den Heuvel; Martine A Collart; Rolf Boelens; H Th Marc Timmers
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

5.  Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases.

Authors:  N Zheng; P Wang; P D Jeffrey; N P Pavletich
Journal:  Cell       Date:  2000-08-18       Impact factor: 41.582

6.  Protein-protein interactions within an E2-RING finger complex. Implications for ubiquitin-dependent DNA damage repair.

Authors:  Helle D Ulrich
Journal:  J Biol Chem       Date:  2002-12-19       Impact factor: 5.157

7.  Crystal structure of the human ubiquitin conjugating enzyme complex, hMms2-hUbc13.

Authors:  T F Moraes; R A Edwards; S McKenna; L Pastushok; W Xiao; J N Glover; M J Ellison
Journal:  Nat Struct Biol       Date:  2001-08

8.  Understanding the relative acyl-transfer reactivity of oxoesters and thioesters: computational analysis of transition state delocalization effects.

Authors:  W Yang; D G Drueckhammer
Journal:  J Am Chem Soc       Date:  2001-11-07       Impact factor: 15.419

9.  Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.

Authors:  K S Hamilton; M J Ellison; K R Barber; R S Williams; J T Huzil; S McKenna; C Ptak; M Glover; G S Shaw
Journal:  Structure       Date:  2001-10       Impact factor: 5.006

10.  Structure of an E6AP-UbcH7 complex: insights into ubiquitination by the E2-E3 enzyme cascade.

Authors:  L Huang; E Kinnucan; G Wang; S Beaudenon; P M Howley; J M Huibregtse; N P Pavletich
Journal:  Science       Date:  1999-11-12       Impact factor: 47.728

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  86 in total

1.  Insights into ubiquitin-conjugating enzyme/ co-activator interactions from the structure of the Pex4p:Pex22p complex.

Authors:  Chris Williams; Marlene van den Berg; Santosh Panjikar; Will A Stanley; Ben Distel; Matthias Wilmanns
Journal:  EMBO J       Date:  2011-11-15       Impact factor: 11.598

2.  Crystal structures of two bacterial HECT-like E3 ligases in complex with a human E2 reveal atomic details of pathogen-host interactions.

Authors:  David Yin-wei Lin; Jianbo Diao; Jue Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

3.  E1-E2 interactions in ubiquitin and Nedd8 ligation pathways.

Authors:  Zeynep Tokgöz; Thomas J Siepmann; Frederick Streich; Brajesh Kumar; Jennifer M Klein; Arthur L Haas
Journal:  J Biol Chem       Date:  2011-11-08       Impact factor: 5.157

4.  Dimeric Ube2g2 simultaneously engages donor and acceptor ubiquitins to form Lys48-linked ubiquitin chains.

Authors:  Weixiao Liu; Yongliang Shang; Yan Zeng; Chao Liu; Yanchang Li; Linhui Zhai; Pan Wang; Jizhong Lou; Ping Xu; Yihong Ye; Wei Li
Journal:  EMBO J       Date:  2013-12-23       Impact factor: 11.598

Review 5.  Ubiquitination of substrates by esterification.

Authors:  Xiaoli Wang; Roger A Herr; Ted H Hansen
Journal:  Traffic       Date:  2011-09-13       Impact factor: 6.215

Review 6.  Ubiquitination in disease pathogenesis and treatment.

Authors:  Doris Popovic; Domagoj Vucic; Ivan Dikic
Journal:  Nat Med       Date:  2014-11-06       Impact factor: 53.440

7.  The ubiquitination machinery of the ubiquitin system.

Authors:  Judy Callis
Journal:  Arabidopsis Book       Date:  2014-10-06

8.  Reconstruction of an active SOCS3-based E3 ubiquitin ligase complex in vitro: identification of the active components and JAK2 and gp130 as substrates.

Authors:  Nadia J Kershaw; Artem Laktyushin; Nicos A Nicola; Jeffrey J Babon
Journal:  Growth Factors       Date:  2014-01-20       Impact factor: 2.511

Review 9.  The ubiquitin proteasome system and myocardial ischemia.

Authors:  Justine Calise; Saul R Powell
Journal:  Am J Physiol Heart Circ Physiol       Date:  2012-12-07       Impact factor: 4.733

Review 10.  Targeting the ubiquitin-mediated proteasome degradation of p53 for cancer therapy.

Authors:  Tiffany Devine; Mu-Shui Dai
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

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