Literature DB >> 2114012

A human immunoglobulin kappa orphon without sequence defects may be the product of a pericentric inversion.

C Huber1, R Thiebe, H Hameister, H Smola, E Lötscher, H G Zachau.   

Abstract

The VK gene segments that have been transposed from the kappa locus on the short arm of chromosome 2 at 2p11-12 to other chromosomal sites are called orphons. The 18 VK orphons sequenced up to now carry defects and are to be considered pseudogenes. We now describe the VKI gene segment V108 whose sequence is without any defects and which was localized to the long arm of chromosome 2 at 2q12-14 by in situ hybridization. The V108 region may have been transposed from the short to the long arm of chromosome 2 by a pericentric inversion. Possible reasons for the conservation of its sequence are discussed. In spite of its bona fide sequence V108 is considered to be an unlikely candidate for a VK-JK rearrangement and subsequent functional expression.

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Year:  1990        PMID: 2114012      PMCID: PMC330999          DOI: 10.1093/nar/18.12.3475

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

1.  Evolution of a group of transposed human V kappa genes.

Authors:  F J Zimmer; C Huber; M Quenzel; H Schek; C Stiller; R Thiebe; H G Zachau
Journal:  Biol Chem Hoppe Seyler       Date:  1990-03

2.  New Giemsa method for the differential staining of sister chromatids.

Authors:  P Perry; S Wolff
Journal:  Nature       Date:  1974-09-13       Impact factor: 49.962

3.  Organization and evolution of a gene cluster for human immunoglobulin variable regions of the kappa type.

Authors:  M Pech; H R Jaenichen; H D Pohlenz; P S Neumaier; H G Klobeck; H G Zachau
Journal:  J Mol Biol       Date:  1984-06-25       Impact factor: 5.469

4.  Molecular footprints of human immunoglobulin gene evolution: a new sequence family.

Authors:  B Straubinger; M Pech; K Mühlebach; H R Jaenichen; H G Bauer; H G Zachau
Journal:  Nucleic Acids Res       Date:  1984-07-11       Impact factor: 16.971

5.  Correct transcription of an immunoglobulin kappa gene requires an upstream fragment containing conserved sequence elements.

Authors:  F G Falkner; H G Zachau
Journal:  Nature       Date:  1984 Jul 5-11       Impact factor: 49.962

6.  Construction of improved M13 vectors using oligodeoxynucleotide-directed mutagenesis.

Authors:  J Norrander; T Kempe; J Messing
Journal:  Gene       Date:  1983-12       Impact factor: 3.688

Review 7.  Organization and expression of eucaryotic split genes coding for proteins.

Authors:  R Breathnach; P Chambon
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

8.  Localization of human immunoglobulin kappa light chain variable region genes to the short arm of chromosome 2 by in situ hybridization.

Authors:  S Malcolm; P Barton; C Murphy; M A Ferguson-Smith; D L Bentley; T H Rabbitts
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

9.  Orphons: dispersed genetic elements derived from tandem repetitive genes of eucaryotes.

Authors:  G Childs; R Maxson; R H Cohn; L Kedes
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

10.  Chromosomal location of human kappa and lambda immunoglobulin light chain constant region genes.

Authors:  O W McBride; P A Hieter; G F Hollis; D Swan; M C Otey; P Leder
Journal:  J Exp Med       Date:  1982-05-01       Impact factor: 14.307

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  8 in total

1.  New nucleotide sequence data on the EMBL File Server.

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Authors:  Ina Fickelscher; Thomas Liehr; Kathryn Watts; Victoria Bryant; John C K Barber; Simone Heidemann; Reiner Siebert; Jens Michael Hertz; Zeynep Tumer; N Simon Thomas
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3.  Polymorphisms in the Tcrb-V2 gene segments localize the Tcrb orphon genes to human chromosome 9p21.

Authors:  P Charmley; S Wei; P Concannon
Journal:  Immunogenetics       Date:  1993       Impact factor: 2.846

4.  A rearrangement on chromosome 5 of an expressed human beta-glucuronidase pseudogene.

Authors:  C A Sargent; I J Chalmers; M Leversha; N A Affara
Journal:  Mamm Genome       Date:  1994-12       Impact factor: 2.957

5.  Characterization of the NPHP1 locus: mutational mechanism involved in deletions in familial juvenile nephronophthisis.

Authors:  S Saunier; J Calado; F Benessy; F Silbermann; R Heilig; J Weissenbach; C Antignac
Journal:  Am J Hum Genet       Date:  2000-03       Impact factor: 11.025

6.  Physical mapping of the human T-cell receptor beta gene complex, using yeast artificial chromosomes.

Authors:  Y Hashim; I Ragoussis; L Kearney; S Tosi; A K So
Journal:  Immunogenetics       Date:  1995       Impact factor: 2.846

7.  Duplicated KOX zinc finger gene clusters flank the centromere of human chromosome 10: evidence for a pericentric inversion during primate evolution.

Authors:  A Tunnacliffe; L Liu; J K Moore; M A Leversha; M S Jackson; L Papi; M A Ferguson-Smith; H J Thiesen; B A Ponder
Journal:  Nucleic Acids Res       Date:  1993-03-25       Impact factor: 16.971

8.  Organization of human T-cell receptor beta-chain genes: clusters of V beta genes are present on chromosomes 7 and 9.

Authors:  M A Robinson; M P Mitchell; S Wei; C E Day; T M Zhao; P Concannon
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

  8 in total

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