Literature DB >> 21139217

Cloning, purification and preliminary crystallographic analysis of cobalamin methyltransferases from Rhodobacter capsulatus.

Arefeh Seyedarabi1, Thomas Hutchison, Teng Teng To, Evelyne Deery, Amanda Brindley, Martin J Warren, Richard W Pickersgill.   

Abstract

Of the 30 biosynthetic steps necessary for the production of cobalamin (vitamin B12), eight involve the addition of S-adenosylmethionine-derived methyl groups to the tetrapyrrole framework. These eight methyl additions are catalysed by six canonical methyltransferase domains and one noncanonical methyltransferase domain. Recombinant forms of four methyltransferases from Rhodobacter capsulatus, CobJ, CobM, CobF and CobL, and of the C-terminal noncanonical domain of CobL (CobL-C) have been crystallized, some in more than one crystal form. Most of the crystals diffracted to beyond 2.5 Å resolution and all are suitable for structure determination. Crystals of CobM and CobJ, which are involved in ring contraction, and of CobL, which is involved in two methylations and decarboxylation, are reported for the first time.

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Year:  2010        PMID: 21139217      PMCID: PMC2998376          DOI: 10.1107/S1744309110042910

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  10 in total

1.  The crystal structure of MT0146/CbiT suggests that the putative precorrin-8w decarboxylase is a methyltransferase.

Authors:  Jacob P Keller; Paul M Smith; Jordi Benach; Dinesh Christendat; George T deTitta; John F Hunt
Journal:  Structure       Date:  2002-11       Impact factor: 5.006

2.  Crystal structures of CbiL, a methyltransferase involved in anaerobic vitamin B biosynthesis, and CbiL in complex with S-adenosylhomocysteine--implications for the reaction mechanism.

Authors:  Kei Wada; Jiro Harada; Yuki Yaeda; Hitoshi Tamiaki; Hirozo Oh-Oka; Keiichi Fukuyama
Journal:  FEBS J       Date:  2007-01       Impact factor: 5.542

3.  Molecular replacement with MOLREP.

Authors:  Alexei Vagin; Alexei Teplyakov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Structure/function studies on a S-adenosyl-L-methionine-dependent uroporphyrinogen III C methyltransferase (SUMT), a key regulatory enzyme of tetrapyrrole biosynthesis.

Authors:  Jitka Vévodová; Ross M Graham; Evelyne Raux; Heidi L Schubert; David I Roper; Amanda A Brindley; A Ian Scott; Charles A Roessner; N Patrick J Stamford; M Elizabeth Stroupe; Elizabeth D Getzoff; Martin J Warren; Keith S Wilson
Journal:  J Mol Biol       Date:  2004-11-19       Impact factor: 5.469

6.  The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.

Authors:  H L Schubert; K S Wilson; E Raux; S C Woodcock; M J Warren
Journal:  Nat Struct Biol       Date:  1998-07

Review 7.  Evolution of enzymes and pathways for the biosynthesis of cofactors.

Authors:  Gemma L Holliday; Janet M Thornton; Andrée Marquet; Alison G Smith; Fabrice Rébeillé; Ralf Mendel; Heidi L Schubert; Andrew D Lawrence; Martin J Warren
Journal:  Nat Prod Rep       Date:  2007-09-12       Impact factor: 13.423

Review 8.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 9.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Elucidation of substrate specificity in the cobalamin (vitamin B12) biosynthetic methyltransferases. Structure and function of the C20 methyltransferase (CbiL) from Methanothermobacter thermautotrophicus.

Authors:  Stefanie Frank; Evelyne Deery; Amanda A Brindley; Helen K Leech; Andrew Lawrence; Peter Heathcote; Heidi L Schubert; Keith Brocklehurst; Steve E J Rigby; Martin J Warren; Richard W Pickersgill
Journal:  J Biol Chem       Date:  2007-06-13       Impact factor: 5.157

  10 in total
  1 in total

1.  An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.

Authors:  Evelyne Deery; Susanne Schroeder; Andrew D Lawrence; Samantha L Taylor; Arefeh Seyedarabi; Jitka Waterman; Keith S Wilson; David Brown; Michael A Geeves; Mark J Howard; Richard W Pickersgill; Martin J Warren
Journal:  Nat Chem Biol       Date:  2012-10-07       Impact factor: 15.040

  1 in total

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