Literature DB >> 21110998

TIR domain-containing adaptor SARM is a late addition to the ongoing microbe-host dialog.

Qing Zhang1, Christian M Zmasek, Xiaohui Cai, Adam Godzik.   

Abstract

Toll/interleukin-1 receptor (TIR) domain-containing proteins play important roles in defense against pathogens in both animals and plants, connecting the immunity signaling pathways via a chain of specific protein-protein interactions. Among them is SARM, the only TIR domain-containing adaptor that can negatively regulate TLR signaling. By extensive phylogenetic analysis, we show here that SARM is closely related to bacterial proteins with TIR domains, suggesting that this family has a different evolutionary history from other animal TIR-containing adaptors, possibly emerging via a lateral gene transfer from bacteria to animals. We also show evidence of several similar, independent transfer events, none of which, however, survived in vertebrates. An evolutionary relationship between the animal SARM adaptor and bacterial proteins with TIR domains illustrates the possible role that bacterial TIR-containing proteins play in regulating eukaryotic immune responses and how this mechanism was possibly adapted by the eukaryotes themselves.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21110998      PMCID: PMC3085110          DOI: 10.1016/j.dci.2010.11.013

Source DB:  PubMed          Journal:  Dev Comp Immunol        ISSN: 0145-305X            Impact factor:   3.636


  45 in total

Review 1.  Origin and evolution of eukaryotic apoptosis: the bacterial connection.

Authors:  E V Koonin; L Aravind
Journal:  Cell Death Differ       Date:  2002-04       Impact factor: 15.828

2.  Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle.

Authors:  Richard Desper; Olivier Gascuel
Journal:  J Comput Biol       Date:  2002       Impact factor: 1.479

3.  An extensively associated dimer in the structure of the C713S mutant of the TIR domain of human TLR2.

Authors:  Xiao Tao; Yingwu Xu; Ye Zheng; Amer A Beg; Liang Tong
Journal:  Biochem Biophys Res Commun       Date:  2002-11-29       Impact factor: 3.575

4.  CLANS: a Java application for visualizing protein families based on pairwise similarity.

Authors:  Tancred Frickey; Andrei Lupas
Journal:  Bioinformatics       Date:  2004-07-29       Impact factor: 6.937

5.  The crystal structure of a TIR domain from Arabidopsis thaliana reveals a conserved helical region unique to plants.

Authors:  Siew Leong Chan; Takashi Mukasa; Eugenio Santelli; Lieh Yoon Low; Jaime Pascual
Journal:  Protein Sci       Date:  2010-01       Impact factor: 6.725

6.  Amphioxus SARM involved in neural development may function as a suppressor of TLR signaling.

Authors:  Shaochun Yuan; Kui Wu; Manyi Yang; Liqun Xu; Ling Huang; Huiling Liu; Xin Tao; Shengfeng Huang; Anlong Xu
Journal:  J Immunol       Date:  2010-05-14       Impact factor: 5.422

7.  Structural basis for signal transduction by the Toll/interleukin-1 receptor domains.

Authors:  Y Xu; X Tao; B Shen; T Horng; R Medzhitov; J L Manley; L Tong
Journal:  Nature       Date:  2000-11-02       Impact factor: 49.962

8.  Common interaction surfaces of the toll-like receptor 4 cytoplasmic domain stimulate multiple nuclear targets.

Authors:  Tapani Ronni; Vishal Agarwal; Michael Haykinson; Margaret E Haberland; Genhong Cheng; Stephen T Smale
Journal:  Mol Cell Biol       Date:  2003-04       Impact factor: 4.272

9.  MAFFT version 5: improvement in accuracy of multiple sequence alignment.

Authors:  Kazutaka Katoh; Kei-ichi Kuma; Hiroyuki Toh; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2005-01-20       Impact factor: 16.971

10.  Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes.

Authors:  Ken Kurokawa; Takehiko Itoh; Tomomi Kuwahara; Kenshiro Oshima; Hidehiro Toh; Atsushi Toyoda; Hideto Takami; Hidetoshi Morita; Vineet K Sharma; Tulika P Srivastava; Todd D Taylor; Hideki Noguchi; Hiroshi Mori; Yoshitoshi Ogura; Dusko S Ehrlich; Kikuji Itoh; Toshihisa Takagi; Yoshiyuki Sakaki; Tetsuya Hayashi; Masahira Hattori
Journal:  DNA Res       Date:  2007-10-03       Impact factor: 4.458

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  25 in total

Review 1.  The amphioxus genome provides unique insight into the evolution of immunity.

Authors:  Larry J Dishaw; Robert N Haire; Gary W Litman
Journal:  Brief Funct Genomics       Date:  2012-03-07       Impact factor: 4.241

Review 2.  A new eye on NLR proteins: focused on clarity or diffused by complexity?

Authors:  Vera Bonardi; Karen Cherkis; Marc T Nishimura; Jeffery L Dangl
Journal:  Curr Opin Immunol       Date:  2012-02-03       Impact factor: 7.486

Review 3.  Axon Self-Destruction: New Links among SARM1, MAPKs, and NAD+ Metabolism.

Authors:  Josiah Gerdts; Daniel W Summers; Jeffrey Milbrandt; Aaron DiAntonio
Journal:  Neuron       Date:  2016-02-03       Impact factor: 17.173

4.  The SARM1 Toll/Interleukin-1 Receptor Domain Possesses Intrinsic NAD+ Cleavage Activity that Promotes Pathological Axonal Degeneration.

Authors:  Kow Essuman; Daniel W Summers; Yo Sasaki; Xianrong Mao; Aaron DiAntonio; Jeffrey Milbrandt
Journal:  Neuron       Date:  2017-03-22       Impact factor: 17.173

5.  The axon degeneration gene SARM1 is evolutionarily distinct from other TIR domain-containing proteins.

Authors:  Harsha Malapati; Spencer M Millen; William J Buchser
Journal:  Mol Genet Genomics       Date:  2017-04-26       Impact factor: 3.291

Review 6.  Mechanisms of injury-induced axon degeneration.

Authors:  Chen Ding; Marc Hammarlund
Journal:  Curr Opin Neurobiol       Date:  2019-05-06       Impact factor: 6.627

7.  A Staphylococcus aureus TIR domain protein virulence factor blocks TLR2-mediated NF-κB signaling.

Authors:  Fatemeh Askarian; Nina M van Sorge; Maria Sangvik; Federico C Beasley; Jørn R Henriksen; Johanna U E Sollid; Jos A G van Strijp; Victor Nizet; Mona Johannessen
Journal:  J Innate Immun       Date:  2014-01-25       Impact factor: 7.349

8.  TIR Domain Proteins Are an Ancient Family of NAD+-Consuming Enzymes.

Authors:  Kow Essuman; Daniel W Summers; Yo Sasaki; Xianrong Mao; Aldrin Kay Yuen Yim; Aaron DiAntonio; Jeffrey Milbrandt
Journal:  Curr Biol       Date:  2018-01-25       Impact factor: 10.834

9.  Passenger Mutations Confound Phenotypes of SARM1-Deficient Mice.

Authors:  Melissa B Uccellini; Susana V Bardina; Maria Teresa Sánchez-Aparicio; Kris M White; Ying-Ju Hou; Jean K Lim; Adolfo García-Sastre
Journal:  Cell Rep       Date:  2020-04-07       Impact factor: 9.423

10.  SARM1-specific motifs in the TIR domain enable NAD+ loss and regulate injury-induced SARM1 activation.

Authors:  Daniel W Summers; Daniel A Gibson; Aaron DiAntonio; Jeffrey Milbrandt
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-26       Impact factor: 11.205

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