Literature DB >> 28447196

The axon degeneration gene SARM1 is evolutionarily distinct from other TIR domain-containing proteins.

Harsha Malapati1, Spencer M Millen2, William J Buchser3,4.   

Abstract

Many forms of neurodegenerative disease are characterized by Wallerian degeneration, an active program of axonal destruction. Recently, the important player which enacts Wallerian degeneration was discovered, the multidomain protein SARM1. Since the SARM1 protein has classically been thought of as an innate immune molecule, its role in Wallerian degeneration has raised questions on the evolutionary forces acting on it. Here, we synthesize a picture of SARM1's evolution through various organisms by examining the molecular and genetic changes of SARM1 and the genes around it. Using proteins that possess domains homologous to SARM1, we established distances and Ka/Ks values through 5671 pairwise species-species comparisons. We demonstrate that SARM1 diverged across species in a pattern similar to other SAM domain-containing proteins. This is surprising, because it was expected that SARM1 would behave more like its TIR domain relatives. Going along with this divorce from TIR, we also noted that SARM1's TIR is under stronger purifying selection than the rest of the TIR domain-containing proteins (remaining highly conserved). In addition, SARM1's synteny analysis reveals that the surrounding gene cluster is highly conserved, functioning as a potential nexus of gene functionality across species. Taken together, SARM1 demonstrates a unique evolutionary pattern, separate from the TIR domain protein family.

Entities:  

Keywords:  Avian; Innate immune; Neuroscience; Synteny; Wallerian axon degeneration

Mesh:

Substances:

Year:  2017        PMID: 28447196     DOI: 10.1007/s00438-017-1320-6

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  30 in total

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Journal:  Brain       Date:  2016-02-11       Impact factor: 13.501

4.  Prevention of vincristine-induced peripheral neuropathy by genetic deletion of SARM1 in mice.

Authors:  Stefanie Geisler; Ryan A Doan; Amy Strickland; Xin Huang; Jeffrey Milbrandt; Aaron DiAntonio
Journal:  Brain       Date:  2016-10-25       Impact factor: 13.501

5.  Studies on the quantitative and qualitative characterization of erythrocyte glutathione peroxidase.

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Journal:  J Lab Clin Med       Date:  1967-07

6.  Absence of Wallerian Degeneration does not Hinder Regeneration in Peripheral Nerve.

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7.  The WldS gene delays axonal but not somatic degeneration in a rat glaucoma model.

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Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

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Authors:  Sabine Patot; Paul Imbert; Jessica Baude; Patricia Martins Simões; Jean-Baptiste Campergue; Arthur Louche; Reindert Nijland; Michèle Bès; Anne Tristan; Frédéric Laurent; Adrien Fischer; Jacques Schrenzel; François Vandenesch; Suzana Salcedo; Patrice François; Gérard Lina
Journal:  PLoS Pathog       Date:  2017-01-06       Impact factor: 6.823

10.  T-cell death following immune activation is mediated by mitochondria-localized SARM.

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Journal:  Cell Death Differ       Date:  2012-11-23       Impact factor: 15.828

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  3 in total

1.  Passenger Mutations Confound Phenotypes of SARM1-Deficient Mice.

Authors:  Melissa B Uccellini; Susana V Bardina; Maria Teresa Sánchez-Aparicio; Kris M White; Ying-Ju Hou; Jean K Lim; Adolfo García-Sastre
Journal:  Cell Rep       Date:  2020-04-07       Impact factor: 9.423

Review 2.  Axonal Degeneration during Aging and Its Functional Role in Neurodegenerative Disorders.

Authors:  Natalia Salvadores; Mario Sanhueza; Patricio Manque; Felipe A Court
Journal:  Front Neurosci       Date:  2017-09-04       Impact factor: 4.677

3.  Domain-centric database to uncover structure of minimally characterized viral genomes.

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Journal:  Sci Data       Date:  2020-06-25       Impact factor: 6.444

  3 in total

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