Literature DB >> 21109663

From the connectome to the synaptome: an epic love story.

Javier DeFelipe1.   

Abstract

A major challenge in neuroscience is to decipher the structural layout of the brain. The term "connectome" has recently been proposed to refer to the highly organized connection matrix of the human brain. However, defining how information flows through such a complex system represents so difficult a task that it seems unlikely it could be achieved in the near future or, for the most pessimistic, perhaps ever. Circuit diagrams of the nervous system can be considered at different levels, although they are surely impossible to complete at the synaptic level. Nevertheless, advances in our capacity to marry macro- and microscopic data may help establish a realistic statistical model that could describe connectivity at the ultrastructural level, the "synaptome," giving us cause for optimism.

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Year:  2010        PMID: 21109663     DOI: 10.1126/science.1193378

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  71 in total

Review 1.  Large-scale automated histology in the pursuit of connectomes.

Authors:  David Kleinfeld; Arjun Bharioke; Pablo Blinder; Davi D Bock; Kevin L Briggman; Dmitri B Chklovskii; Winfried Denk; Moritz Helmstaedter; John P Kaufhold; Wei-Chung Allen Lee; Hanno S Meyer; Kristina D Micheva; Marcel Oberlaender; Steffen Prohaska; R Clay Reid; Stephen J Smith; Shinya Takemura; Philbert S Tsai; Bert Sakmann
Journal:  J Neurosci       Date:  2011-11-09       Impact factor: 6.167

2.  Three-dimensional analysis of spiny dendrites using straightening and unrolling transforms.

Authors:  Juan Morales; Ruth Benavides-Piccione; Angel Rodríguez; Luis Pastor; Rafael Yuste; Javier DeFelipe
Journal:  Neuroinformatics       Date:  2012-10

3.  Fluorescence micro-optical sectioning tomography using acousto-optical deflector-based confocal scheme.

Authors:  Xiaoli Qi; Tao Yang; Longhui Li; Jiancun Wang; Shaoqun Zeng; Xiaohua Lv
Journal:  Neurophotonics       Date:  2015-10-15       Impact factor: 3.593

Review 4.  Beyond counts and shapes: studying pathology of dendritic spines in the context of the surrounding neuropil through serial section electron microscopy.

Authors:  M Kuwajima; J Spacek; K M Harris
Journal:  Neuroscience       Date:  2012-05-01       Impact factor: 3.590

Review 5.  The connectomics challenge.

Authors:  Ludovico Silvestri; Leonardo Sacconi; Francesco Saverio Pavone
Journal:  Funct Neurol       Date:  2013 Jul-Sep

Review 6.  Weighing the Evidence in Peters' Rule: Does Neuronal Morphology Predict Connectivity?

Authors:  Christopher L Rees; Keivan Moradi; Giorgio A Ascoli
Journal:  Trends Neurosci       Date:  2016-12-29       Impact factor: 13.837

Review 7.  Neuronal tracing for connectomic studies.

Authors:  Ju Lu
Journal:  Neuroinformatics       Date:  2011-09

Review 8.  Transcribing the connectome: roles for transcription factors and chromatin regulators in activity-dependent synapse development.

Authors:  Liang-Fu Chen; Allen S Zhou; Anne E West
Journal:  J Neurophysiol       Date:  2017-05-10       Impact factor: 2.714

9.  Connecting connectomes.

Authors:  Maryann E Martone; Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2013-10

Review 10.  Neuronal morphology goes digital: a research hub for cellular and system neuroscience.

Authors:  Ruchi Parekh; Giorgio A Ascoli
Journal:  Neuron       Date:  2013-03-20       Impact factor: 17.173

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