Literature DB >> 21102555

RsgA releases RbfA from 30S ribosome during a late stage of ribosome biosynthesis.

Simon Goto1, Shingo Kato, Takatsugu Kimura, Akira Muto, Hyouta Himeno.   

Abstract

RsgA is a 30S ribosomal subunit-binding GTPase with an unknown function, shortage of which impairs maturation of the 30S subunit. We identified multiple gain-of-function mutants of Escherichia coli rbfA, the gene for a ribosome-binding factor, that suppress defects in growth and maturation of the 30S subunit of an rsgA-null strain. These mutations promote spontaneous release of RbfA from the 30S subunit, indicating that cellular disorders upon depletion of RsgA are due to prolonged retention of RbfA on the 30S subunit. We also found that RsgA enhances release of RbfA from the mature 30S subunit in a GTP-dependent manner but not from a precursor form of the 30S subunit. These findings indicate that the function of RsgA is to release RbfA from the 30S subunit during a late stage of ribosome biosynthesis. This is the first example of the action of a GTPase on the bacterial ribosome assembly described at the molecular level.

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Year:  2010        PMID: 21102555      PMCID: PMC3020115          DOI: 10.1038/emboj.2010.291

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  60 in total

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2.  A novel GTPase activated by the small subunit of ribosome.

Authors:  Hyouta Himeno; Kyoko Hanawa-Suetsugu; Takatsugu Kimura; Kuniaki Takagi; Wakana Sugiyama; Shinobu Shirata; Tomoyuki Mikami; Fujiko Odagiri; Yukiko Osanai; Daisuke Watanabe; Simon Goto; Liliya Kalachnyuk; Chisato Ushida; Akira Muto
Journal:  Nucleic Acids Res       Date:  2004-10-05       Impact factor: 16.971

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Authors:  C S Dammel; H F Noller
Journal:  Genes Dev       Date:  1995-03-01       Impact factor: 11.361

4.  RimM and RbfA are essential for efficient processing of 16S rRNA in Escherichia coli.

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Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

Review 5.  A genomic perspective on protein families.

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Journal:  Science       Date:  1997-10-24       Impact factor: 47.728

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Authors:  W A Held; M Nomura
Journal:  Biochemistry       Date:  1973-08-14       Impact factor: 3.162

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Journal:  Nat New Biol       Date:  1971-07-14

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Authors:  P Traub; M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  1968-03       Impact factor: 11.205

9.  Complementary sequences 1700 nucleotides apart form a ribonuclease III cleavage site in Escherichia coli ribosomal precursor RNA.

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Journal:  Proc Natl Acad Sci U S A       Date:  1978-08       Impact factor: 11.205

10.  Total reconstitution of functionally active 50S ribosomal subunits from Escherichia coli.

Authors:  K H Nierhaus; F Dohme
Journal:  Proc Natl Acad Sci U S A       Date:  1974-12       Impact factor: 11.205

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  27 in total

1.  Cryo-electron microscopy structure of the 30S subunit in complex with the YjeQ biogenesis factor.

Authors:  Ahmad Jomaa; Geordie Stewart; Jason A Mears; Inga Kireeva; Eric D Brown; Joaquin Ortega
Journal:  RNA       Date:  2011-09-29       Impact factor: 4.942

2.  In vivo X-ray footprinting of pre-30S ribosomes reveals chaperone-dependent remodeling of late assembly intermediates.

Authors:  Sarah F Clatterbuck Soper; Romel P Dator; Patrick A Limbach; Sarah A Woodson
Journal:  Mol Cell       Date:  2013-10-24       Impact factor: 17.970

3.  Understanding ribosome assembly: the structure of in vivo assembled immature 30S subunits revealed by cryo-electron microscopy.

Authors:  Ahmad Jomaa; Geordie Stewart; Jaime Martín-Benito; Ryszard Zielke; Tracey L Campbell; Janine R Maddock; Eric D Brown; Joaquin Ortega
Journal:  RNA       Date:  2011-02-08       Impact factor: 4.942

4.  Structural basis for the function of a small GTPase RsgA on the 30S ribosomal subunit maturation revealed by cryoelectron microscopy.

Authors:  Qiang Guo; Yi Yuan; Yanji Xu; Boya Feng; Liang Liu; Kai Chen; Ming Sun; Zhixiu Yang; Jianlin Lei; Ning Gao
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-25       Impact factor: 11.205

5.  The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly.

Authors:  Aida Razi; Alba Guarné; Joaquin Ortega
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-10       Impact factor: 11.205

6.  Escherichia coli rimM and yjeQ null strains accumulate immature 30S subunits of similar structure and protein complement.

Authors:  Vivian Leong; Meredith Kent; Ahmad Jomaa; Joaquin Ortega
Journal:  RNA       Date:  2013-04-23       Impact factor: 4.942

7.  Conserved GTPase LepA (Elongation Factor 4) functions in biogenesis of the 30S subunit of the 70S ribosome.

Authors:  Michelle R Gibbs; Kyung-Mee Moon; Menglin Chen; Rohan Balakrishnan; Leonard J Foster; Kurt Fredrick
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

Review 8.  Roles of elusive translational GTPases come to light and inform on the process of ribosome biogenesis in bacteria.

Authors:  Michelle R Gibbs; Kurt Fredrick
Journal:  Mol Microbiol       Date:  2017-12-29       Impact factor: 3.501

9.  Ribosome Dimerization Protects the Small Subunit.

Authors:  Heather A Feaga; Mykhailo Kopylov; Jenny Kim Kim; Marko Jovanovic; Jonathan Dworkin
Journal:  J Bacteriol       Date:  2020-04-27       Impact factor: 3.490

10.  Overexpression of RbfA in the absence of the KsgA checkpoint results in impaired translation initiation.

Authors:  Keith Connolly; Gloria Culver
Journal:  Mol Microbiol       Date:  2013-02-06       Impact factor: 3.501

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