Literature DB >> 21097614

Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian.

Yanling Hao1, Dawei Huang, Huiyuan Guo, Man Xiao, Haoran An, Liang Zhao, Fanglei Zuo, Bing Zhang, Songnian Hu, Shuhui Song, Shangwu Chen, Fazheng Ren.   

Abstract

Bifidobacterium longum subsp. longum BBMN68 was isolated from the feces of a healthy centenarian living in an area of BaMa, Guangxi, China, known for longevity. Here we report the main genome features of B. longum strain BBMN68 and the identification of several predicted proteins associated with the ecological niche of longevity.

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Year:  2010        PMID: 21097614      PMCID: PMC3021241          DOI: 10.1128/JB.01213-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  16 in total

1.  Artemis: sequence visualization and annotation.

Authors:  K Rutherford; J Parkhill; J Crook; T Horsnell; P Rice; M A Rajandream; B Barrell
Journal:  Bioinformatics       Date:  2000-10       Impact factor: 6.937

Review 2.  Gut flora in health and disease.

Authors:  Francisco Guarner; Juan-R Malagelada
Journal:  Lancet       Date:  2003-02-08       Impact factor: 79.321

3.  A serpin from the gut bacterium Bifidobacterium longum inhibits eukaryotic elastase-like serine proteases.

Authors:  Dmitri Ivanov; Celine Emonet; Francis Foata; Michael Affolter; Michelle Delley; Makda Fisseha; Stephanie Blum-Sperisen; Sunil Kochhar; Fabrizio Arigoni
Journal:  J Biol Chem       Date:  2006-04-20       Impact factor: 5.157

4.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

5.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

6.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

7.  The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Authors:  Mark A Schell; Maria Karmirantzou; Berend Snel; David Vilanova; Bernard Berger; Gabriella Pessi; Marie-Camille Zwahlen; Frank Desiere; Peer Bork; Michele Delley; R David Pridmore; Fabrizio Arigoni
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

8.  Emergence of 4',4"-aminoglycoside nucleotidyltransferase in enterococci.

Authors:  C Carlier; P Courvalin
Journal:  Antimicrob Agents Chemother       Date:  1990-08       Impact factor: 5.191

9.  Oral administration of live Bifidobacterium substrains isolated from centenarians enhances intestinal function in mice.

Authors:  Haiying Yang; Aiping Liu; Ming Zhang; Salam A Ibrahim; Zhihua Pang; Xiaojing Leng; Fazheng Ren
Journal:  Curr Microbiol       Date:  2009-08-22       Impact factor: 2.188

10.  BACTIBASE second release: a database and tool platform for bacteriocin characterization.

Authors:  Riadh Hammami; Abdelmajid Zouhir; Christophe Le Lay; Jeannette Ben Hamida; Ismail Fliss
Journal:  BMC Microbiol       Date:  2010-01-27       Impact factor: 3.605

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  14 in total

Review 1.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

2.  The MarR Family Regulator BmrR Is Involved in Bile Tolerance of Bifidobacterium longum BBMN68 via Controlling the Expression of an ABC Transporter.

Authors:  Qi Xu; Zhengyuan Zhai; Haoran An; Yang Yang; Jia Yin; Guohong Wang; Fazheng Ren; Yanling Hao
Journal:  Appl Environ Microbiol       Date:  2019-01-23       Impact factor: 4.792

3.  Integrated transcriptomic and proteomic analysis of the bile stress response in a centenarian-originated probiotic Bifidobacterium longum BBMN68.

Authors:  Haoran An; François P Douillard; Guohong Wang; Zhengyuan Zhai; Jin Yang; Shuhui Song; Jianyun Cui; Fazheng Ren; Yunbo Luo; Bing Zhang; Yanling Hao
Journal:  Mol Cell Proteomics       Date:  2014-06-25       Impact factor: 5.911

Review 4.  Bifidobacterial enzymes involved in the metabolism of human milk oligosaccharides.

Authors:  Motomitsu Kitaoka
Journal:  Adv Nutr       Date:  2012-05-01       Impact factor: 8.701

5.  A Transposon Mutagenesis System for Bifidobacterium longum subsp. longum Based on an IS3 Family Insertion Sequence, ISBlo11.

Authors:  Mikiyasu Sakanaka; Shingo Nakakawaji; Shin Nakajima; Satoru Fukiya; Arisa Abe; Wataru Saburi; Haruhide Mori; Atsushi Yokota
Journal:  Appl Environ Microbiol       Date:  2018-08-17       Impact factor: 4.792

6.  Mechanism analysis of acid tolerance response of bifidobacterium longum subsp. longum BBMN 68 by gene expression profile using RNA-sequencing.

Authors:  Junhua Jin; Bing Zhang; Huiyuan Guo; Jianyun Cui; Lu Jiang; Shuhui Song; Min Sun; Fazheng Ren
Journal:  PLoS One       Date:  2012-12-07       Impact factor: 3.240

7.  Starch and starch hydrolysates are favorable carbon sources for bifidobacteria in the human gut.

Authors:  Songling Liu; Fazheng Ren; Liang Zhao; Lu Jiang; Yanling Hao; Junhua Jin; Ming Zhang; Huiyuan Guo; Xingen Lei; Erna Sun; Hongna Liu
Journal:  BMC Microbiol       Date:  2015-03-01       Impact factor: 3.605

8.  Intraspecies Genomic Diversity and Long-Term Persistence of Bifidobacterium longum.

Authors:  Andrei V Chaplin; Boris A Efimov; Vladimir V Smeianov; Lyudmila I Kafarskaia; Alla P Pikina; Andrei N Shkoporov
Journal:  PLoS One       Date:  2015-08-14       Impact factor: 3.240

9.  Age-Related Changes in the Composition of Gut Bifidobacterium Species.

Authors:  Kumiko Kato; Toshitaka Odamaki; Eri Mitsuyama; Hirosuke Sugahara; Jin-Zhong Xiao; Ro Osawa
Journal:  Curr Microbiol       Date:  2017-06-08       Impact factor: 2.188

10.  Characterization and Exploitation of CRISPR Loci in Bifidobacterium longum.

Authors:  Claudio Hidalgo-Cantabrana; Alexandra B Crawley; Borja Sanchez; Rodolphe Barrangou
Journal:  Front Microbiol       Date:  2017-09-26       Impact factor: 5.640

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