Literature DB >> 12376138

Applications of mass spectrometry for quantitation of DNA adducts.

Hasan Koc1, James A Swenberg.   

Abstract

DNA adducts are formed when electrophilic molecules or free radicals attack DNA. 32P-postlabeling has been the most commonly used assay for quantitation of DNA adducts due mainly to its excellent sensitivity that allows quantitation at concentrations as low as approximately 1 adduct per 10(9) normal bases. Such methods, however, do not have the specificity desired for accurate and reliable quantitation, and are prone to produce false positives and artifacts. In the last decade, mass spectrometry in combination with liquid and gas chromatography has presented itself as a good alternative to these techniques since it can satisfy the need for specificity and reliability through the use of stable isotope-labeled internal standards and highly specific detection modes such as selected reaction monitoring and high-resolution mass spectrometry. In this article, the contribution of mass spectrometry to the quantitation of DNA adducts is reviewed with special emphasis on unique applications of mass spectrometry in the area of DNA adduct quantitation and recent applications with improvements in sensitivity. Copyright 2002 Elsevier Science B.V.

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Year:  2002        PMID: 12376138     DOI: 10.1016/s1570-0232(02)00135-6

Source DB:  PubMed          Journal:  J Chromatogr B Analyt Technol Biomed Life Sci        ISSN: 1570-0232            Impact factor:   3.205


  26 in total

1.  Direct analysis in real time (DART) mass spectrometry of nucleotides and nucleosides: elucidation of a novel fragment [C5H5O]+ and its in-source adducts.

Authors:  Matthew Curtis; Mikael A Minier; Priyanka Chitranshi; O David Sparkman; Patrick R Jones; Liang Xue
Journal:  J Am Soc Mass Spectrom       Date:  2010-04-07       Impact factor: 3.109

2.  Human protein reference database and human proteinpedia as discovery resources for molecular biotechnology.

Authors:  Renu Goel; Babylakshmi Muthusamy; Akhilesh Pandey; T S Keshava Prasad
Journal:  Mol Biotechnol       Date:  2011-05       Impact factor: 2.695

3.  Structural characterization of formaldehyde-induced cross-links between amino acids and deoxynucleosides and their oligomers.

Authors:  Kun Lu; Wenjie Ye; Li Zhou; Leonard B Collins; Xian Chen; Avram Gold; Louise M Ball; James A Swenberg
Journal:  J Am Chem Soc       Date:  2010-03-17       Impact factor: 15.419

4.  Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks.

Authors:  Alejandro Wolf-Yadlin; Sampsa Hautaniemi; Douglas A Lauffenburger; Forest M White
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

5.  High-throughput metabolic toxicity screening using magnetic biocolloid reactors and LC-MS/MS.

Authors:  Linlin Zhao; John B Schenkman; James F Rusling
Journal:  Anal Chem       Date:  2010-11-19       Impact factor: 6.986

6.  Detection of DNA adducts derived from the reactive metabolite of furan, cis-2-butene-1,4-dial.

Authors:  Michael C Byrns; Choua C Vu; Jonathan W Neidigh; José-Luis Abad; Roger A Jones; Lisa A Peterson
Journal:  Chem Res Toxicol       Date:  2006-03       Impact factor: 3.739

7.  Advanced glycation end products of DNA: quantification of N2-(1-Carboxyethyl)-2'-deoxyguanosine in biological samples by liquid chromatography electrospray ionization tandem mass spectrometry.

Authors:  Timothy Synold; Bixin Xi; Gerald E Wuenschell; Daniel Tamae; James L Figarola; Samuel Rahbar; John Termini
Journal:  Chem Res Toxicol       Date:  2008-11       Impact factor: 3.739

Review 8.  Mass spectrometry of structurally modified DNA.

Authors:  Natalia Tretyakova; Peter W Villalta; Srikanth Kotapati
Journal:  Chem Rev       Date:  2013-02-26       Impact factor: 60.622

9.  An improved liquid chromatography-tandem mass spectrometry method for the quantification of 4-aminobiphenyl DNA adducts in urinary bladder cells and tissues.

Authors:  Kristen L Randall; Dayana Argoti; Joseph D Paonessa; Yi Ding; Zachary Oaks; Yuesheng Zhang; Paul Vouros
Journal:  J Chromatogr A       Date:  2009-11-10       Impact factor: 4.759

10.  Screening for DNA adducts by data-dependent constant neutral loss-triple stage mass spectrometry with a linear quadrupole ion trap mass spectrometer.

Authors:  Erin E Bessette; Angela K Goodenough; Sophie Langouët; Isil Yasa; Ivan D Kozekov; Simon D Spivack; Robert J Turesky
Journal:  Anal Chem       Date:  2009-01-15       Impact factor: 6.986

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