Literature DB >> 21081950

Pentalenic acid is a shunt metabolite in the biosynthesis of the pentalenolactone family of metabolites: hydroxylation of 1-deoxypentalenic acid mediated by CYP105D7 (SAV_7469) of Streptomyces avermitilis.

Satoshi Takamatsu1, Lian-Hua Xu, Shinya Fushinobu, Hirofumi Shoun, Mamoru Komatsu, David E Cane, Haruo Ikeda.   

Abstract

Pentalenic acid (1) has been isolated from many pan class="Species">Streptomyces sp. as a co-metabolite of the sesquiterpenoid antibiotic pentalenolactone and related natural products. We have previously reported the identification of a 13.4-kb gene cluster in the genome of Streptomyces avermitilis implicated in the biosynthesis of the pentalenolactone family of metabolites consisting of 13 open reading frames. Detailed molecular genetic and biochemical studies have revealed that at least seven genes are involved in the biosynthesis of the newly discovered metabolites, neopentalenoketolactone, but no gene specifically dedicated to the formation of pentalenic acid (1) was evident in the same gene cluster. The wild-type strain of S. avermitilis, as well as its derivatives, mainly produce pentalenic acid (1), together with neopentalenoketolactone (9). Disruption of the sav7469 gene encoding a cytochrome P450 (CYP105D7), members of which class are associated with the hydroxylation of many structurally different compounds, abolished the production of pentalenic acid (1). The sav7469-deletion mutant derived from SUKA11 carrying pKU462∷ptl-clusterΔptlH accumulated 1-deoxypentalenic acid (5), but not pentalenic acid (1). Reintroduction of an extra-copy of the sav7469 gene to SUKA11 Δsav7469 carrying pKU462∷ptl-clusterΔptlH restored the production of pentalenic acid (1). Recombinant CYP105D7 prepared from Escherichia coli catalyzed the oxidative conversion of 1-deoxypentalenic acid (5) to pentalenic acid (1) in the presence of the electron-transport partners, ferredoxin (Fdx) and Fdx reductase, both in vivo and in vitro. These results unambiguously demonstrate that CYP105D7 is responsible for the conversion of 1-deoxypentalenic acid (5) to pentalenic acid (1), a shunt product in the biosynthesis of the pentalenolactone family of metabolites.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21081950      PMCID: PMC3030646          DOI: 10.1038/ja.2010.135

Source DB:  PubMed          Journal:  J Antibiot (Tokyo)        ISSN: 0021-8820            Impact factor:   2.649


  26 in total

1.  THE CARBON MONOXIDE-BINDING PIGMENT OF LIVER MICROSOMES. I. EVIDENCE FOR ITS HEMOPROTEIN NATURE.

Authors:  T OMURA; R SATO
Journal:  J Biol Chem       Date:  1964-07       Impact factor: 5.157

2.  Pentalenolactone biosynthesis: Molecular cloning and assignment of biochemical function to PtlF, a short-chain dehydrogenase from Streptomyces avermitilis, and identification of a new biosynthetic intermediate.

Authors:  Zheng You; Satoshi Omura; Haruo Ikeda; David E Cane
Journal:  Arch Biochem Biophys       Date:  2006-11-22       Impact factor: 4.013

Review 3.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

4.  A gene cluster for biosynthesis of the sesquiterpenoid antibiotic pentalenolactone in Streptomyces avermitilis.

Authors:  Charles N Tetzlaff; Zheng You; David E Cane; Satoshi Takamatsu; Satoshi Omura; Haruo Ikeda
Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

5.  Inhibitory effect of pentalenolactone on vascular smooth muscle cell proliferation.

Authors:  M Ikeda; A Fukuda; M Takagi; M Morita; Y Shimada
Journal:  Eur J Pharmacol       Date:  2001-01-05       Impact factor: 4.432

6.  Pentalenolactone biosynthesis. Molecular cloning and assignment of biochemical function to PtlH, a non-heme iron dioxygenase of Streptomyces avermitilis.

Authors:  Zheng You; Satoshi Omura; Haruo Ikeda; David E Cane
Journal:  J Am Chem Soc       Date:  2006-05-24       Impact factor: 15.419

7.  Geosmin biosynthesis in Streptomyces avermitilis. Molecular cloning, expression, and mechanistic study of the germacradienol/geosmin synthase.

Authors:  David E Cane; Xiaofei He; Seiji Kobayashi; Satoshi Omura; Haruo Ikeda
Journal:  J Antibiot (Tokyo)       Date:  2006-08       Impact factor: 2.649

8.  Transposon mutagenesis by Tn4560 and applications with avermectin-producing Streptomyces avermitilis.

Authors:  H Ikeda; Y Takada; C H Pang; H Tanaka; S Omura
Journal:  J Bacteriol       Date:  1993-04       Impact factor: 3.490

9.  Studies on biosynthesis of pentalenolactone. V isolation of deoxypentalenylglucuron.

Authors:  S Takahashi; M Takeuchi; M Arai; H Seto; N Otake
Journal:  J Antibiot (Tokyo)       Date:  1983-03       Impact factor: 2.649

View more
  16 in total

Review 1.  Genome mining of the Streptomyces avermitilis genome and development of genome-minimized hosts for heterologous expression of biosynthetic gene clusters.

Authors:  Haruo Ikeda; Shin-ya Kazuo; Satoshi Omura
Journal:  J Ind Microbiol Biotechnol       Date:  2013-08-29       Impact factor: 3.346

2.  Genome mining in streptomyces. Discovery of an unprecedented P450-catalyzed oxidative rearrangement that is the final step in the biosynthesis of pentalenolactone.

Authors:  Dongqing Zhu; Myung-Ji Seo; Haruo Ikeda; David E Cane
Journal:  J Am Chem Soc       Date:  2011-02-01       Impact factor: 15.419

Review 3.  Cytochromes P450 for natural product biosynthesis in Streptomyces: sequence, structure, and function.

Authors:  Jeffrey D Rudolf; Chin-Yuan Chang; Ming Ma; Ben Shen
Journal:  Nat Prod Rep       Date:  2017-08-30       Impact factor: 13.423

4.  The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism.

Authors:  Lian Duan; Gerwald Jogl; David E Cane
Journal:  J Am Chem Soc       Date:  2016-09-16       Impact factor: 15.419

5.  Regio- and stereospecific hydroxylation of various steroids at the 16α position of the D ring by the Streptomyces griseus cytochrome P450 CYP154C3.

Authors:  Takuya Makino; Yohei Katsuyama; Toshihiko Otomatsu; Norihiko Misawa; Yasuo Ohnishi
Journal:  Appl Environ Microbiol       Date:  2013-12-13       Impact factor: 4.792

6.  Genome mining in Streptomyces. Elucidation of the role of Baeyer-Villiger monooxygenases and non-heme iron-dependent dehydrogenase/oxygenases in the final steps of the biosynthesis of pentalenolactone and neopentalenolactone.

Authors:  Myung-Ji Seo; Dongqing Zhu; Saori Endo; Haruo Ikeda; David E Cane
Journal:  Biochemistry       Date:  2011-02-08       Impact factor: 3.162

7.  Hydroxylation of Steroids by a Microbial Substrate-Promiscuous P450 Cytochrome (CYP105D7): Key Arginine Residues for Rational Design.

Authors:  Bingbing Ma; Qianwen Wang; Haruo Ikeda; Chunfang Zhang; Lian-Hua Xu
Journal:  Appl Environ Microbiol       Date:  2019-11-14       Impact factor: 4.792

Review 8.  Terpene synthases in disguise: enzymology, structure, and opportunities of non-canonical terpene synthases.

Authors:  Jeffrey D Rudolf; Chin-Yuan Chang
Journal:  Nat Prod Rep       Date:  2020-03-25       Impact factor: 13.423

Review 9.  Bacterial terpenome.

Authors:  Jeffrey D Rudolf; Tyler A Alsup; Baofu Xu; Zining Li
Journal:  Nat Prod Rep       Date:  2021-05-26       Impact factor: 15.111

10.  Characterization of high-H2O2-tolerant bacterial cytochrome P450 CYP105D18: insights into papaverine N-oxidation.

Authors:  Bashu Dev Pardhe; Hackwon Do; Chang-Sook Jeong; Ki-Hwa Kim; Jun Hyuck Lee; Tae-Jin Oh
Journal:  IUCrJ       Date:  2021-06-29       Impact factor: 4.769

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.