| Literature DB >> 21070631 |
Onofre Combarros1, Donald R Warden, Naomi Hammond, Mario Cortina-Borja, Olivia Belbin, Michael G Lehmann, Gordon K Wilcock, Kristelle Brown, Patrick G Kehoe, Rachel Barber, Eliecer Coto, Victoria Alvarez, Panos Deloukas, Rhian Gwilliam, Reinhard Heun, Heike Kölsch, Ignacio Mateo, Abderrahim Oulhaj, Alejandro Arias-Vásquez, Maaike Schuur, Yurii S Aulchenko, M Arfan Ikram, Monique M Breteler, Cornelia M van Duijn, Kevin Morgan, A David Smith, Donald J Lehmann.
Abstract
BACKGROUND: The loss of noradrenergic neurones of the locus coeruleus is a major feature of Alzheimer's disease (AD). Dopamine β-hydroxylase (DBH) catalyses the conversion of dopamine to noradrenaline. Interactions have been reported between the low-activity -1021T allele (rs1611115) of DBH and polymorphisms of the pro-inflammatory cytokine genes, IL1A and IL6, contributing to the risk of AD. We therefore examined the associations with AD of the DBH -1021T allele and of the above interactions in the Epistasis Project, with 1757 cases of AD and 6294 elderly controls.Entities:
Mesh:
Substances:
Year: 2010 PMID: 21070631 PMCID: PMC2994840 DOI: 10.1186/1471-2350-11-162
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Studied SNPs
| Gene | SNP | Minor allele frequency in controls | Linkage disequilibrium in controls | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| North Europe | North Spain | Difference ( | With | North Europe | North Spain | |||||
| rs1611115 | -1021C/T | 20.7% (T) | 19.7% (T) | 0.47 | rs5320 | 0.994 | 0.015 | 0.994 | 0.017 | |
| rs 5320 | Exon 3 | 5.3% (A, Thr) | 6.0% (A, Thr) | 0.38 | rs1611131 | 0.257 | 0.002 | 0.393 | 0.003 | |
| rs1611131 | Intron 10 | 29.4% (G) | 24.5% (G) | rs1611115 | 0.295 | 0.055 | 0.250 | 0.047 | ||
| rs1800587 | -889C/T | 29.2% (T) | 25.4% (T) | rs17561 | 0.999 | 0.994 | 0.989 | 0.971 | ||
| rs17561 | Exon 5 | 29.2% (T, Ser) | 25.6% (T, Ser) | rs3783550 | 0.997 | 0.185 | 0.999 | 0.145 | ||
| rs3783550 | Intron 6 | 31.2% (C) | 29.8% (C) | 0.39 | rs1800587 | 0.994 | 0.185 | 0.999 | 0.144 | |
| rs1800795 | -174G/C | 41.1% (C) | 32.8% (C) | rs2069837 | 0.999 | 0.055 | 0.998 | 0.049 | ||
| rs2069837 | Intron 2 | 7.3% (G) | 9.3% (G) | |||||||
SNP = single nucleotide polymorphism, DBH = dopamine β-hydroxylase, IL1A = interleukin-lα, IL6 = interleukin-6, D' = ratio of observed linkage disequilibrium to maximum possible linkage disequilibrium, r= correlation coefficient.
Results in bold are significant at p < 0.05.
Interactions of DBH -1021TT+TC versus CC with sex and age in AD risk
| Interaction | Dataset | Numbers | Power* | Adjusted† synergy factor (95% CI, | |
|---|---|---|---|---|---|
| Controls | AD | ||||
| With sex | All | 6201 | 1611 | 88% | |
| North Europe | 5708 | 1109 | 78% | ||
| North Spain | 493 | 502 | 32% | 1.3 (0.7-2.5, 0.4) | |
| With age | All | 6200 | 1611 | 85% | |
| (± 75 years) | North Europe | 5708 | 1109 | 73% | 1.3 (0.9-1.8, 0.2) |
| North Spain | 492 | 502 | 32% | ||
DBH = dopamine β-hydroxylase, AD = Alzheimer's disease, CI = confidence interval.
* power to detect a synergy factor of 1.4, as in the overall dataset, at p < 0.05.
† All analyses controlled for centre, age, sex and genotype of apolipoprotein E ε4.
Results in bold are significant at p < 0.05.
Odds ratios of AD for DBH -1021TT+TC vs CC, stratified by sex and by age
| Subset | Adjusted* odds ratios of AD |
|---|---|
| Men | |
| Women | 1.05 (0.9-1.2, 0.60) |
| All < 75 years | |
| All > 75 years | 1.06 (0.9-1.3, 0.47) |
| Men < 75 years | |
| Men > 75 years | 1.35 (0.98-1.8, 0.06) |
| Women < 75 years | 1.3 (0.9-1.9, 0.24) |
| Women > 75 years | 0.95 (0.8-1.2, 0.66) |
AD = Alzheimer's disease, DBH = dopamine β-hydroxylase, CI = confidence interval.
* All analyses controlled for centre, age, sex and genotype of apolipoprotein E ε4.
Results in bold are significant at p < 0.05.
Odds ratios of AD for DBH -1021TT+TC vs CC in certain subsets
| Subset | Adjusted* odds ratios of AD (95% CI, | ||
|---|---|---|---|
| All | North Europe | North Spain | |
| All | 1.3 (0.97-1.7, 0.08) | ||
| Men | 1.5 (0.9-2.55, 0.12) | ||
| All < 75 years | |||
| Men < 75 years | 1.9 (0.8-4.4, 0.12) | ||
AD = Alzheimer's disease, DBH = dopamine β-hydroxylase, CI = confidence interval.
* All analyses controlled for centre, age, sex and genotype of apolipoprotein E ε4.
Results in bold are significant at p < 0.05.
Interactions of DBH -1021TT+TC vs CC with variants of IL1A and IL6 in AD risk
| Interaction with | Dataset | Numbers | Power* | Adjusted† synergy factor (95% CI, | |
|---|---|---|---|---|---|
| Controls | AD | ||||
| All | 6137 | 1535 | 93% | ||
| North Europe | 5678 | 1078 | 87% | ||
| North Spain | 459 | 457 | 32% | 3.4 (0.9-12.3, 0.07) | |
| All | 6161 | 1565 | 95% | 1.3 (0.98-1.7, 0.07) | |
| North Europe | 5692 | 1084 | 88% | ||
| North Spain | 469 | 481 | 44% | 0.94 (0.5-1.7, 0.85) | |
The first column indicates the models used to represent the SNPs, IL1A -889T/C and IL6 -174G/C, in the analyses of interactions with DBH -1021C/T.
AD = Alzheimer's disease, DBH = dopamine β-hydroxylase, CI = confidence interval.
* Power to detect a synergy factor of 1.9 (first interaction) or 1.5 (second interaction) at p < 0.05.
† All analyses controlled for centre, age, sex and genotype of apolipoprotein E ε4.
Results in bold are significant at p < 0.05.
Odds ratios of AD for the DBH and IL1A variants*, when stratified by each other
| Odds ratio of AD for:- | In the subset:- | Numbers | Adjusted† odds ratio of AD (95% CI, | |
|---|---|---|---|---|
| Controls | AD | |||
| CC: 3546 | CC: 862 | 1.1 (0.99-1.3, 0.07) | ||
| vs CC | TT+TC: 2077 | TT+TC: 516 | ||
| CC: 340 | CC: 87 | |||
| TT+TC: 174 | TT+TC: 70 | |||
| TC+CC: 3546 | TC+CC: 862 | 0.95 (0.7-1.3, 0.76) | ||
| vs TC+CC | TT: 340 | TT: 87 | ||
| TC+CC: 2077 | TC+CC: 516 | |||
| TT: 174 | TT: 70 | |||
AD = Alzheimer's disease, DBH = dopamine β-hydroxylase, IL1A = interleukin-1α, CI = confidence interval.
* DBH -1021TT+TC vs CC and IL1A -889TT vs TC+CC
† All analyses controlled for centre, age, sex and genotype of apolipoprotein E ε4.
Results in bold are significant at p < 0.05.