Literature DB >> 21057592

Theoretical Studies of Proton-Coupled Electron Transfer: Models and Concepts Relevant to Bioenergetics.

Sharon Hammes-Schiffer1, Elizabeth Hatcher, Hiroshi Ishikita, Jonathan H Skone, Alexander V Soudackov.   

Abstract

Theoretical studies of proton-coupled electron transfer (PCET) reactions for model systems provide insight into fundamental concepts relevant to bioenergetics. A dynamical theoretical formulation for vibronically nonadiabatic PCET reactions has been developed. This theory enables the calculation of rates and kinetic isotope effects, as well as the pH and temperature dependences, of PCET reactions. Methods for calculating the vibronic couplings for PCET systems have also been developed and implemented. These theoretical approaches have been applied to a wide range of PCET reactions, including tyrosyl radical generation in a tyrosine-bound rhenium polypyridyl complex, phenoxyl/phenol and benzyl/toluene self-exchange reactions, and hydrogen abstraction catalyzed by the enzyme lipoxygenase. These applications have elucidated some of the key underlying physical principles of PCET reactions. The tools and concepts derived from these theoretical studies provide the foundation for future theoretical studies of PCET in more complex bioenergetic systems such as Photosystem II.

Entities:  

Year:  2008        PMID: 21057592      PMCID: PMC2971562          DOI: 10.1016/j.ccr.2007.07.019

Source DB:  PubMed          Journal:  Coord Chem Rev        ISSN: 0010-8545            Impact factor:   22.315


  34 in total

1.  Temperature-dependent isotope effects in soybean lipoxygenase-1: correlating hydrogen tunneling with protein dynamics.

Authors:  Michael J Knapp; Keith Rickert; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2002-04-17       Impact factor: 15.419

2.  Initial electron donor and acceptor in isolated Photosystem II reaction centers identified with femtosecond mid-IR spectroscopy.

Authors:  Marie Louise Groot; Natalia P Pawlowicz; Luuk J G W van Wilderen; Jacques Breton; Ivo H M van Stokkum; Rienk van Grondelle
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-31       Impact factor: 11.205

3.  Role of D1-His190 in the proton-coupled oxidation of tyrosine YZ in manganese-depleted photosystem II.

Authors:  A M Hays; I R Vassiliev; J H Golbeck; R J Debus
Journal:  Biochemistry       Date:  1999-09-14       Impact factor: 3.162

4.  Switching the redox mechanism: models for proton-coupled electron transfer from tyrosine and tryptophan.

Authors:  Martin Sjödin; Stenbjörn Styring; Henriette Wolpher; Yunhua Xu; Licheng Sun; Leif Hammarström
Journal:  J Am Chem Soc       Date:  2005-03-23       Impact factor: 15.419

5.  Nature of hydrogen transfer in soybean lipoxygenase 1: separation of primary and secondary isotope effects.

Authors:  K W Rickert; J P Klinman
Journal:  Biochemistry       Date:  1999-09-21       Impact factor: 3.162

6.  Density-functional investigation on the mechanism of H-atom abstraction by lipoxygenase.

Authors:  Nicolai Lehnert; Edward I Solomon
Journal:  J Biol Inorg Chem       Date:  2002-11-14       Impact factor: 3.358

7.  Direct tyrosine oxidation using the MLCT excited states of rhenium polypyridyl complexes.

Authors:  Steven Y Reece; Daniel G Nocera
Journal:  J Am Chem Soc       Date:  2005-07-06       Impact factor: 15.419

8.  Proton-coupled electron transfer versus hydrogen atom transfer in benzyl/toluene, methoxyl/methanol, and phenoxyl/phenol self-exchange reactions.

Authors:  James M Mayer; David A Hrovat; Jennie L Thomas; Weston Thatcher Borden
Journal:  J Am Chem Soc       Date:  2002-09-18       Impact factor: 15.419

Review 9.  Theoretical studies of proton-coupled electron transfer reactions.

Authors:  Sharon Hammes-Schiffer; Nedialka Iordanova
Journal:  Biochim Biophys Acta       Date:  2004-04-12

10.  Role of D1-His190 in proton-coupled electron transfer reactions in photosystem II: a chemical complementation study.

Authors:  A M Hays; I R Vassiliev; J H Golbeck; R J Debus
Journal:  Biochemistry       Date:  1998-08-11       Impact factor: 3.162

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  22 in total

1.  Insights into proton-coupled electron transfer mechanisms of electrocatalytic H2 oxidation and production.

Authors:  Samantha Horvath; Laura E Fernandez; Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-23       Impact factor: 11.205

2.  Molecular basis of intramolecular electron transfer in proteins during radical-mediated oxidations: computer simulation studies in model tyrosine-cysteine peptides in solution.

Authors:  Ariel A Petruk; Silvina Bartesaghi; Madia Trujillo; Darío A Estrin; Daniel Murgida; Balaraman Kalyanaraman; Marcelo A Marti; Rafael Radi
Journal:  Arch Biochem Biophys       Date:  2012-05-26       Impact factor: 4.013

3.  Nonadiabatic rate constants for proton transfer and proton-coupled electron transfer reactions in solution: Effects of quadratic term in the vibronic coupling expansion.

Authors:  Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  J Chem Phys       Date:  2015-11-21       Impact factor: 3.488

Review 4.  Proton-coupled electron transfer.

Authors:  My Hang V Huynh; Thomas J Meyer
Journal:  Chem Rev       Date:  2007-11       Impact factor: 60.622

Review 5.  Theory of coupled electron and proton transfer reactions.

Authors:  Sharon Hammes-Schiffer; Alexei A Stuchebrukhov
Journal:  Chem Rev       Date:  2010-11-04       Impact factor: 60.622

Review 6.  H-transfers in Photosystem II: what can we learn from recent lessons in the enzyme community?

Authors:  Sam Hay; Nigel S Scrutton
Journal:  Photosynth Res       Date:  2008-09-03       Impact factor: 3.573

7.  Theoretical Study of Shallow Distance Dependence of Proton-Coupled Electron Transfer in Oligoproline Peptides.

Authors:  Pengfei Li; Alexander V Soudackov; Brian Koronkiewicz; James M Mayer; Sharon Hammes-Schiffer
Journal:  J Am Chem Soc       Date:  2020-08-03       Impact factor: 15.419

8.  Proton-coupled electron transfer reactions: analytical rate constants and case study of kinetic isotope effects in lipoxygenase.

Authors:  Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  Faraday Discuss       Date:  2016-12-22       Impact factor: 4.008

9.  Electrostatic effects on proton coupled electron transfer in oxomanganese complexes inspired by the oxygen-evolving complex of photosystem II.

Authors:  Muhamed Amin; Leslie Vogt; Serguei Vassiliev; Ivan Rivalta; Mohammad M Sultan; Doug Bruce; Gary W Brudvig; Victor S Batista; M R Gunner
Journal:  J Phys Chem B       Date:  2013-05-15       Impact factor: 2.991

10.  Analysis of kinetic isotope effects for proton-coupled electron transfer reactions.

Authors:  Sarah J Edwards; Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  J Phys Chem A       Date:  2009-03-12       Impact factor: 2.781

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